Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_E09
(1000 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 157 3e-37
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 93 1e-17
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 91 4e-17
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 69 1e-10
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 67 8e-10
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 49 2e-04
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 48 3e-04
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 42 0.025
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.100
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 38 0.53
UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;... 37 0.93
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 35 2.8
UniRef50_UPI0000F2AE75 Cluster: PREDICTED: similar to a disinteg... 35 2.8
UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4; ... 35 3.8
UniRef50_Q53D46 Cluster: JM24; n=4; Cercopithecine herpesvirus 1... 34 5.0
UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase... 34 5.0
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 6.6
UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer ariet... 33 8.7
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 157 bits (382), Expect = 3e-37
Identities = 74/84 (88%), Positives = 75/84 (89%)
Frame = +1
Query: 490 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAXVRGGETRQDYKDTRRFPLEAPSCALLFRP 669
SK+ T R RFSIGSAPLTSITKIDA VRGGETRQDYKDTRRFPLEAPSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 670 CRLPDTCPPFSLREAWRFLIAHAV 741
CRLPDTCPPFSLREAWRFLIAHAV
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAV 85
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 92.7 bits (220), Expect = 1e-17
Identities = 44/54 (81%), Positives = 46/54 (85%)
Frame = +1
Query: 508 VKRPRCWRFSIGSAPLTSITKIDAXVRGGETRQDYKDTRRFPLEAPSCALLFRP 669
V+ PR RFSIGSAPLTSITK DA + GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 91.1 bits (216), Expect = 4e-17
Identities = 44/56 (78%), Positives = 45/56 (80%)
Frame = +1
Query: 514 RPRCWRFSIGSAPLTSITKIDAXVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 681
RPR RFSIGSAPLTSI K DA + GGETRQDYKD RRFPL APSCALLF P LP
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +3
Query: 321 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 419
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 69.3 bits (162), Expect = 1e-10
Identities = 41/60 (68%), Positives = 42/60 (70%)
Frame = -3
Query: 563 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAAERP 384
MLVRGAEPMEKR + L V LL CS L PLILWITVLPPLSEL PLAA ERP
Sbjct: 1 MLVRGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 66.9 bits (156), Expect = 8e-10
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +3
Query: 648 VRSPVPTLPLTGYLSAFLPSGSVALSHSSRCSIXS 752
+RSPVPTLPLTGYLSAFLPSGSVALSHSSRC S
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLS 35
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +3
Query: 297 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 455
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 48.8 bits (111), Expect = 2e-04
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = -3
Query: 701 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 582
+K QVSGKRQGRNRRAHEGA+ K SL PPLT
Sbjct: 60 KKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
Score = 33.9 bits (74), Expect = 6.6
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -2
Query: 738 SVSYEKAPRFPKGERRTGIR*AAGSEQESARGSFQG 631
SVSYEKAPRFPKG++ + +G Q R + +G
Sbjct: 47 SVSYEKAPRFPKGKKAEQV---SGKRQGRNRRAHEG 79
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 48.4 bits (110), Expect = 3e-04
Identities = 26/71 (36%), Positives = 38/71 (53%)
Frame = +1
Query: 457 ITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAXVRGGETRQDYKDTRRFPL 636
I +R + + + P T F S PLT+ITKI + +T+ +YK T FPL
Sbjct: 44 IMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPL 103
Query: 637 EAPSCALLFRP 669
++PS +LLF P
Sbjct: 104 QSPSYSLLFPP 114
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 41.9 bits (94), Expect = 0.025
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +1
Query: 223 INKLTTTIAFILCFRFRXEVWEVFSALMNRPTRGERRFAYW 345
+++LT L RF V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.100
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 367 ERGSGRAPNTQTASPRALADSLMQ 296
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 37.5 bits (83), Expect = 0.53
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 108 MIRYIDEFGQTTTRMQ 155
MIRYIDEFGQTTTRMQ
Sbjct: 349 MIRYIDEFGQTTTRMQ 364
>UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;
Janthinobacterium sp. Marseille|Rep: Uncharacterized
conserved protein - Janthinobacterium sp. (strain
Marseille) (Minibacterium massiliensis)
Length = 212
Score = 36.7 bits (81), Expect = 0.93
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = -3
Query: 590 PLTXASIFVMLVRGAEPMEKRQQRGL---FTVPGLLLAFCSHVLSCVIPLILWITVLPPL 420
PLT AS+ + L+ P+ + + RGL T+ G ++A +S V L+L T+L PL
Sbjct: 50 PLTVASLIMFLIANLFPIVEIELRGLRSQTTLTGAVMALAGEGMSLVAMLVLATTLLFPL 109
Query: 419 SELIPL 402
+L+ L
Sbjct: 110 LQLLIL 115
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 35.1 bits (77), Expect = 2.8
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +2
Query: 611 IKIPGVSPWKLPRALSCSDPAAYRIPVRLSPFGKRGA 721
+KI VS LP ALSCS+PA RIPV PF G+
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPV--PPFSLAGS 66
>UniRef50_UPI0000F2AE75 Cluster: PREDICTED: similar to a
disintegrin-like and metalloprotease with thrombospondin
type 1 motif 14; n=1; Monodelphis domestica|Rep:
PREDICTED: similar to a disintegrin-like and
metalloprotease with thrombospondin type 1 motif 14 -
Monodelphis domestica
Length = 1203
Score = 35.1 bits (77), Expect = 2.8
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Frame = -3
Query: 725 RKRHASRREKGGQVSGKRQGRNR-RAHEGASRGKRLVSL*SCRVSP---PLTXASIFVML 558
R+RH+ + +GG G+ +GR R + GA G + S P P ++
Sbjct: 79 RQRHSRAQGEGGGSEGRGRGRRRGQGRAGAGAGAGAGAGCSREEEPRDQPKPRGGLWAAR 138
Query: 557 VRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWIT 435
VR +E ++ GL P L + + S ++SC PL W +
Sbjct: 139 VRTSERAASQRGPGL---PPLQMEYLSVMVSCWFPLNCWFS 176
>UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 668)
Length = 755
Score = 34.7 bits (76), Expect = 3.8
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -3
Query: 728 MRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKR 624
+R+R A RR GG+ G+R+GRNR+ + RG+R
Sbjct: 355 VRRRAAPRRRHGGEWRGRRRGRNRKRRQ--QRGQR 387
>UniRef50_Q53D46 Cluster: JM24; n=4; Cercopithecine herpesvirus
17|Rep: JM24 - Macaca fuscata rhadinovirus
Length = 120
Score = 34.3 bits (75), Expect = 5.0
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = +3
Query: 624 AFPPGSSLVRSPVPTLPLTGYLSAFLPSGSVALSH--SSRCSIXSV 755
AFP GS + P P + GY++ PSG+VAL + SS+C++ +V
Sbjct: 20 AFPMGS--MSGPAPEVCCLGYINKLPPSGAVALYYYTSSQCTLDAV 63
>UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase
kinase 10; n=21; Euteleostomi|Rep: Mitogen-activated
protein kinase kinase kinase 10 - Homo sapiens (Human)
Length = 954
Score = 34.3 bits (75), Expect = 5.0
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = -2
Query: 699 ERRTGIR*AAGSEQESARGSFQGETPGIFIVLSGFATSDXSVDFCDARQGGGAYGKTPAT 520
ER G+ GS+Q S+ G++P + GFA+ + +F +A GG + +P +
Sbjct: 574 ERLKGL--GEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYS 631
Query: 519 RPFYGSWP 496
P Y S P
Sbjct: 632 TPSYLSVP 639
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 6.6
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -3
Query: 257 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 93
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer
arietinum|Rep: Reverse transcriptase - Cicer arietinum
(Chickpea) (Garbanzo)
Length = 37
Score = 33.5 bits (73), Expect = 8.7
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 430 NTVIHRIRGITQERTCE 480
NTVIH +GITQERTCE
Sbjct: 21 NTVIHXNQGITQERTCE 37
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 748,892,173
Number of Sequences: 1657284
Number of extensions: 15109070
Number of successful extensions: 43320
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 41160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43293
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 94306056537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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