Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_E08
         (881 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    25   0.79 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.2  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    23   4.2  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   5.5  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    21   9.7  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    21   9.7  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 25.0 bits (52), Expect = 0.79
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -3

Query: 660 QRVCVKIQCSSVAFSYMQ*HIFCLKAFNH 574
           Q   VK    SV   ++Q  IFCL  FNH
Sbjct: 2   QHEVVKKFLHSVRIVFVQSEIFCLVNFNH 30


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = -3

Query: 372 IFHLIVLWQTQ*VA-MLHVHKVTWSC 298
           +F +I+LW +  +  MLH +  TW C
Sbjct: 138 LFFVILLWISFFLNFMLHCNNTTWRC 163


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 188 TNRNLDKQHFQTMYQLQNLINWRSS 114
           T+     QH+  +   + +I+WRSS
Sbjct: 495 TSHMQQTQHYTNIISQEQIISWRSS 519


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -3

Query: 762 QFYYQLQKHSDLASXIRIFSISIVLWLNF*NLKTQR 655
           Q Y    +   LAS IR+    + +W      KT+R
Sbjct: 62  QRYLSAPEREHLASIIRLTPTQVKIWFQNHRYKTKR 97


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 457 LPKHIQQYVLFHL 419
           LPKH+ QY+L  L
Sbjct: 95  LPKHVDQYLLEQL 107


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -2

Query: 493 DHDDYPHRPLPFLPKHIQQYVLFHLQLH 410
           D D+ P  P  +  +H+ Q++    Q H
Sbjct: 28  DEDNLPKDPRQWTREHVAQWINLVTQQH 55


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -2

Query: 493 DHDDYPHRPLPFLPKHIQQYVLFHLQLH 410
           D D+ P  P  +  +H+ Q++    Q H
Sbjct: 28  DEDNLPKDPRQWTREHVAQWINLVTQQH 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,735
Number of Sequences: 336
Number of extensions: 3435
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)