Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_E08
         (881 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_13364| Best HMM Match : Acetyltransf_1 (HMM E-Value=1.1e-21)        58   9e-09
SB_49056| Best HMM Match : Acetyltransf_1 (HMM E-Value=1.8e-06)        54   2e-07
SB_20020| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.53 
SB_16857| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.53 
SB_46979| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.0  
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)                 29   6.6  

>SB_13364| Best HMM Match : Acetyltransf_1 (HMM E-Value=1.1e-21)
          Length = 259

 Score = 58.0 bits (134), Expect = 9e-09
 Identities = 42/123 (34%), Positives = 62/123 (50%)
 Frame = +1

Query: 346 LPENYQMKYYFYHGLSWPQLSYVAEDEKGHIVGYVLAKMEEDGEDNRHGHITSLAVKRSH 525
           L E Y +  Y Y   +WP L ++A   K   VG ++ K++        G+I  LAV++  
Sbjct: 132 LSEPYSIYTYRYFIHNWPNLCFLAM-YKDQCVGAIVCKLDVHKSMVHRGYIAMLAVEKDF 190

Query: 526 RRLGLAQKLMNQASLAMVECFQAKYVSLHVRKSNRAALNLYTNSLGFKILEIEPKYYADG 705
           RR  +   L+ +A  AM+E      V L    +N+AAL LY N LGF   +   +YY +G
Sbjct: 191 RRHKIGTALVKKAIRAMIE-DNCDEVVLETEITNKAALRLYEN-LGFVRDKRLFRYYLNG 248

Query: 706 EDA 714
            DA
Sbjct: 249 VDA 251


>SB_49056| Best HMM Match : Acetyltransf_1 (HMM E-Value=1.8e-06)
          Length = 118

 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
 Frame = +1

Query: 469 DGEDNRHGHITSLAVKRSHRRLGLAQKLMNQASLAMVECFQAKYVSLHVRKSNRAALNLY 648
           + ++  HGH+T+++V    RRLGLA KLM+     + E  +  +V L VR SN+ A+ +Y
Sbjct: 8   EAQEQWHGHVTAVSVAPEFRRLGLAAKLMSSLE-NISEIKEGFFVDLFVRVSNKVAVAMY 66

Query: 649 TNSLGFKILEIEPKYYA--DGEDAY 717
              LG+ +     +YY+    EDAY
Sbjct: 67  -KQLGYVVYRTVLEYYSGDPDEDAY 90


>SB_20020| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 73

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +1

Query: 145 WYIVWKCCLSKFRFVRELLGG 207
           W++VWK  L +F F+REL+ G
Sbjct: 17  WFVVWKMFLVRFSFIRELVYG 37


>SB_16857| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 73

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +1

Query: 145 WYIVWKCCLSKFRFVRELLGG 207
           W++VWK  L +F F+REL+ G
Sbjct: 17  WFVVWKMFLVRFSFIRELVYG 37


>SB_46979| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 73

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 349 PENYQMKYYFYHGLSWPQLSYV 414
           P NY   YY+Y+   +P LSY+
Sbjct: 41  PHNYAYYYYYYYYYYYPALSYI 62


>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
          Length = 1492

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 18/67 (26%), Positives = 30/67 (44%)
 Frame = +1

Query: 433 HIVGYVLAKMEEDGEDNRHGHITSLAVKRSHRRLGLAQKLMNQASLAMVECFQAKYVSLH 612
           H++ Y L +M+E GE+N  G  T L      R LG       + ++  +E   + +V+ H
Sbjct: 77  HVLFYPLNRMDERGENN--GRCTRLLT----RELGFRASTFQKQAILRLEAHDSVFVAAH 130

Query: 613 VRKSNRA 633
                 A
Sbjct: 131 TSAGKTA 137


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,330,795
Number of Sequences: 59808
Number of extensions: 425850
Number of successful extensions: 851
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2514529411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)