Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_E07
         (878 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0479 + 3606663-3607448                                           29   3.7  
01_06_1737 - 39559321-39559461,39559761-39559817,39559919-395601...    29   4.9  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.6  
02_05_0686 - 30900748-30902167,30903442-30904742                       28   8.6  

>07_01_0479 + 3606663-3607448
          Length = 261

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 16/52 (30%), Positives = 19/52 (36%), Gaps = 7/52 (13%)
 Frame = +2

Query: 707 FPXAXXPPXXPXXKFXPPIXXV-------GKPPXGFKKNXXXPPKNPXXXPP 841
           FP    PP  P  +  PP+          G PP G +     PP  P   PP
Sbjct: 197 FPGGPPPPPGPFMRGPPPMGPPQVRPGMPGGPPPGMRPGMPPPPFRPGMPPP 248


>01_06_1737 -
           39559321-39559461,39559761-39559817,39559919-39560117,
           39560217-39560344,39560443-39560548,39560721-39560800,
           39561189-39561286,39561368-39561481,39561567-39561707,
           39561801-39561885,39562761-39563099
          Length = 495

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -1

Query: 758 GGGIXGXXXXGGGXPXGKXXXTGXFYGFXA 669
           GGG  G    GGG P G+    G +YG  A
Sbjct: 29  GGGGGGGGGGGGGYPYGQDAHGGGYYGAPA 58


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 474 NESAN---ARGEAVCVLGALPLPRSLTRCAR 557
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
 Frame = +2

Query: 710 PXAXXPPXXPXXKFXPPIXX-VGKPPXGFKKN--XXXPPKNPXXXPP 841
           P A  PP  P  K  PP     G PP    K      PPK P   PP
Sbjct: 321 PAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPP 367


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,602,687
Number of Sequences: 37544
Number of extensions: 290382
Number of successful extensions: 1134
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)