Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_E07
         (878 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ182013-1|ABA56305.1|   75|Anopheles gambiae G(alpha)c protein.       26   1.7  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          24   5.3  

>DQ182013-1|ABA56305.1|   75|Anopheles gambiae G(alpha)c protein.
          Length = 75

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 289 YIDEXGQTTTRMQ*KKCFICEICDAXALFVT 381
           ++D  GQ T R +  KCF C +     L  T
Sbjct: 13  FVDVGGQRTQRQKWTKCFDCSVTSILFLVST 43


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = -1

Query: 788 PXGVXXPXKLGGGIXGXXXXGGGXPXGKXXXT 693
           P G   P  +GGG  G    GGG   G    T
Sbjct: 537 PNGPVGPAGVGGGGGGGGGGGGGGVIGSGSTT 568


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,976
Number of Sequences: 2352
Number of extensions: 10478
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94266828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)