Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_E02
         (911 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.4  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   3.3  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   5.8  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 319 LNSVIKKCPVLTLTQFTLKNSRMNSEK 399
           LN  IKK P+  +  FT+   ++N  +
Sbjct: 266 LNLTIKKMPIAIVAPFTIVEPKLNKHE 292


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 319 LNSVIKKCPVLTLTQFTLKNSRMNSEK 399
           LN  IKK P+  +  FT+   ++N  +
Sbjct: 158 LNLTIKKMPIAIVAPFTIVEPKLNKHE 184


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -3

Query: 675 SLWSAYSTPCPVIANVFAASDACAFGLLKC 586
           + W A+S  C V+A V+  S+ C     KC
Sbjct: 328 TFW-AFSNACEVMAIVWITSETCEEVSKKC 356


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +2

Query: 680 PGIXASSDPTGXNPTXKDCVEVLPRPNP 763
           PG+   S P    P  ++ +E   R NP
Sbjct: 102 PGVIGGSKPRVATPEVENRIEQYKRENP 129


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,229
Number of Sequences: 336
Number of extensions: 3688
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25444518
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)