Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_D24
         (907 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC013412-1|AAH13412.1|  173|Homo sapiens HSPC171 protein protein.      79   2e-14
BC003080-1|AAH03080.1|  173|Homo sapiens HSPC171 protein protein.      79   2e-14
BC021109-1|AAH21109.1|  100|Homo sapiens HSPC171 protein protein.      42   0.002

>BC013412-1|AAH13412.1|  173|Homo sapiens HSPC171 protein protein.
          Length = 173

 Score = 79.0 bits (186), Expect = 2e-14
 Identities = 31/59 (52%), Positives = 43/59 (72%)
 Frame = +3

Query: 498 DPGLDLNMEGGMGEHIKDIVILSSITQVLALINNYFWLLLLILPIRVFWLLWTNILGPW 674
           D G+DLNME GM EH+KD+++L++I QVL+  + Y W   L+ P R  +LLW N+LGPW
Sbjct: 87  DGGMDLNMEQGMAEHLKDVILLTAIVQVLSCFSLYVWSFWLLAPGRALYLLWVNVLGPW 145



 Score = 41.5 bits (93), Expect = 0.004
 Identities = 19/66 (28%), Positives = 34/66 (51%)
 Frame = +2

Query: 278 QILVENAATVKFYRNMSMAATSFYGIITALFYYENISNWVLFFNVLVLIIHIACYQLMMY 457
           QI  EN  T+KFY  + + A + Y ++T +F+Y + S W        L ++ A Y  M  
Sbjct: 14  QIFEENRETLKFYLRIILGANAIYCLVTLVFFYSSASFWAWLALGFSLAVYGASYHSMSS 73

Query: 458 ISKPRY 475
           +++  +
Sbjct: 74  MARAAF 79


>BC003080-1|AAH03080.1|  173|Homo sapiens HSPC171 protein protein.
          Length = 173

 Score = 79.0 bits (186), Expect = 2e-14
 Identities = 31/59 (52%), Positives = 43/59 (72%)
 Frame = +3

Query: 498 DPGLDLNMEGGMGEHIKDIVILSSITQVLALINNYFWLLLLILPIRVFWLLWTNILGPW 674
           D G+DLNME GM EH+KD+++L++I QVL+  + Y W   L+ P R  +LLW N+LGPW
Sbjct: 87  DGGMDLNMEQGMAEHLKDVILLTAIVQVLSCFSLYVWSFWLLAPGRALYLLWVNVLGPW 145



 Score = 42.3 bits (95), Expect = 0.002
 Identities = 20/73 (27%), Positives = 37/73 (50%)
 Frame = +2

Query: 278 QILVENAATVKFYRNMSMAATSFYGIITALFYYENISNWVLFFNVLVLIIHIACYQLMMY 457
           QI  EN  T+KFY  + + A + Y ++T +F+Y + S W        L ++ A Y  M  
Sbjct: 14  QIFEENRETLKFYLRIILGANAIYCLVTLVFFYSSASFWAWLALGFSLAVYGASYHSMSS 73

Query: 458 ISKPRYLNNTQLL 496
           +++  +  +  L+
Sbjct: 74  MARAAFSEDGALM 86


>BC021109-1|AAH21109.1|  100|Homo sapiens HSPC171 protein protein.
          Length = 100

 Score = 42.3 bits (95), Expect = 0.002
 Identities = 20/73 (27%), Positives = 37/73 (50%)
 Frame = +2

Query: 278 QILVENAATVKFYRNMSMAATSFYGIITALFYYENISNWVLFFNVLVLIIHIACYQLMMY 457
           QI  EN  T+KFY  + + A + Y ++T +F+Y + S W        L ++ A Y  M  
Sbjct: 14  QIFEENRETLKFYLRIILGANAIYCLVTLVFFYSSASFWAWLALGFSLAVYGASYHSMSS 73

Query: 458 ISKPRYLNNTQLL 496
           +++  +  +  L+
Sbjct: 74  MARAAFSEDGALM 86


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,646,978
Number of Sequences: 237096
Number of extensions: 2354024
Number of successful extensions: 10896
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10893
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)