Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_D24
         (907 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070929-1|AAL48551.1|  174|Drosophila melanogaster RE03116p pro...    89   1e-17
AE013599-2152|AAF58083.1|  174|Drosophila melanogaster CG8320-PA...    89   1e-17

>AY070929-1|AAL48551.1|  174|Drosophila melanogaster RE03116p
           protein.
          Length = 174

 Score = 88.6 bits (210), Expect = 1e-17
 Identities = 36/65 (55%), Positives = 52/65 (80%)
 Frame = +3

Query: 498 DPGLDLNMEGGMGEHIKDIVILSSITQVLALINNYFWLLLLILPIRVFWLLWTNILGPWX 677
           D G DLNMEGG+ E++KD++IL+S T +LALI+NYFWL+LL+ PIR  W+LW +++ PW 
Sbjct: 87  DSGNDLNMEGGIAENVKDLIILTSGTLLLALISNYFWLVLLLAPIRAGWMLWGSVIQPWL 146

Query: 678 FPRSS 692
             R++
Sbjct: 147 SQRNA 151



 Score = 41.9 bits (94), Expect = 0.001
 Identities = 22/73 (30%), Positives = 43/73 (58%)
 Frame = +2

Query: 278 QILVENAATVKFYRNMSMAATSFYGIITALFYYENISNWVLFFNVLVLIIHIACYQLMMY 457
           QI+ EN  T+ FYRNM++   +   +++ L +   ++   +F ++L L+I  + YQ M +
Sbjct: 16  QIVEENKTTLTFYRNMAIGCAAPALLLSFLVF--EVTKTSVFMHILSLLILGSSYQFMAF 73

Query: 458 ISKPRYLNNTQLL 496
           +S+ +Y  +  LL
Sbjct: 74  MSQAKYSESGALL 86


>AE013599-2152|AAF58083.1|  174|Drosophila melanogaster CG8320-PA
           protein.
          Length = 174

 Score = 88.6 bits (210), Expect = 1e-17
 Identities = 36/65 (55%), Positives = 52/65 (80%)
 Frame = +3

Query: 498 DPGLDLNMEGGMGEHIKDIVILSSITQVLALINNYFWLLLLILPIRVFWLLWTNILGPWX 677
           D G DLNMEGG+ E++KD++IL+S T +LALI+NYFWL+LL+ PIR  W+LW +++ PW 
Sbjct: 87  DSGNDLNMEGGIAENVKDLIILTSGTLLLALISNYFWLVLLLAPIRAGWMLWGSVIQPWL 146

Query: 678 FPRSS 692
             R++
Sbjct: 147 SQRNA 151



 Score = 41.9 bits (94), Expect = 0.001
 Identities = 22/73 (30%), Positives = 43/73 (58%)
 Frame = +2

Query: 278 QILVENAATVKFYRNMSMAATSFYGIITALFYYENISNWVLFFNVLVLIIHIACYQLMMY 457
           QI+ EN  T+ FYRNM++   +   +++ L +   ++   +F ++L L+I  + YQ M +
Sbjct: 16  QIVEENKTTLTFYRNMAIGCAAPALLLSFLVF--EVTKTSVFMHILSLLILGSSYQFMAF 73

Query: 458 ISKPRYLNNTQLL 496
           +S+ +Y  +  LL
Sbjct: 74  MSQAKYSESGALL 86


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,550,894
Number of Sequences: 53049
Number of extensions: 657080
Number of successful extensions: 1079
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4423507848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)