Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_D19
(895 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81057-6|CAB02913.1| 221|Caenorhabditis elegans Hypothetical pr... 235 4e-62
D85499-1|BAA12821.1| 221|Caenorhabditis elegans manganese super... 235 4e-62
D12984-1|BAA02363.1| 221|Caenorhabditis elegans manganese super... 235 4e-62
X85790-1|CAA59790.1| 218|Caenorhabditis elegans mangenese super... 221 5e-58
X77021-1|CAA54319.1| 218|Caenorhabditis elegans manganese super... 221 5e-58
U42844-5|AAB53822.1| 218|Caenorhabditis elegans Sod (superoxide... 221 5e-58
Z81545-2|CAB04438.1| 212|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical pr... 28 7.8
AC006603-7|ABB51201.1| 576|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z81057-6|CAB02913.1| 221|Caenorhabditis elegans Hypothetical
protein F10D11.1 protein.
Length = 221
Score = 235 bits (574), Expect = 4e-62
Identities = 109/173 (63%), Positives = 134/173 (77%)
Frame = +3
Query: 171 IMLMSQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNV 350
+ +S+ + + VA A R KH+LP+LPY+Y LEPVIS EIM LHH KHHATY+NNLN
Sbjct: 6 VRCVSKLVQPITGVA-AVRSKHSLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQ 64
Query: 351 AEEKLAQAQAKGDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAVEKDF 530
EEKL +A +KG++ I L PALKFNGGGHINHSIFW NL+ +GG+PS L A++ DF
Sbjct: 65 IEEKLHEAVSKGNVKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSAELLTAIKSDF 124
Query: 531 GSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVP 689
GS DNL+ QLS ++VAVQGSGWGWLGY + K L++ATC NQDPL+ATTGLVP
Sbjct: 125 GSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKILKVATCANQDPLEATTGLVP 177
Score = 77.4 bits (182), Expect = 1e-14
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = +1
Query: 688 PLFGIDVWEHAYYLQYKNVRADYVKAIFDVAXWNDISQRYEKA 816
PLFGIDVWEHAYYLQYKNVR DYV AI+ +A W ++S+R+ KA
Sbjct: 177 PLFGIDVWEHAYYLQYKNVRPDYVNAIWKIANWKNVSERFAKA 219
>D85499-1|BAA12821.1| 221|Caenorhabditis elegans manganese
superoxide dismutase protein.
Length = 221
Score = 235 bits (574), Expect = 4e-62
Identities = 109/173 (63%), Positives = 134/173 (77%)
Frame = +3
Query: 171 IMLMSQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNV 350
+ +S+ + + VA A R KH+LP+LPY+Y LEPVIS EIM LHH KHHATY+NNLN
Sbjct: 6 VRCVSKLVQPITGVA-AVRSKHSLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQ 64
Query: 351 AEEKLAQAQAKGDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAVEKDF 530
EEKL +A +KG++ I L PALKFNGGGHINHSIFW NL+ +GG+PS L A++ DF
Sbjct: 65 IEEKLHEAVSKGNVKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSAELLTAIKSDF 124
Query: 531 GSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVP 689
GS DNL+ QLS ++VAVQGSGWGWLGY + K L++ATC NQDPL+ATTGLVP
Sbjct: 125 GSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKILKVATCANQDPLEATTGLVP 177
Score = 77.4 bits (182), Expect = 1e-14
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = +1
Query: 688 PLFGIDVWEHAYYLQYKNVRADYVKAIFDVAXWNDISQRYEKA 816
PLFGIDVWEHAYYLQYKNVR DYV AI+ +A W ++S+R+ KA
Sbjct: 177 PLFGIDVWEHAYYLQYKNVRPDYVNAIWKIANWKNVSERFAKA 219
>D12984-1|BAA02363.1| 221|Caenorhabditis elegans manganese
superoxide dismutaseprecursor protein.
Length = 221
Score = 235 bits (574), Expect = 4e-62
Identities = 109/173 (63%), Positives = 134/173 (77%)
Frame = +3
Query: 171 IMLMSQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNV 350
+ +S+ + + VA A R KH+LP+LPY+Y LEPVIS EIM LHH KHHATY+NNLN
Sbjct: 6 VRCVSKLVQPITGVA-AVRSKHSLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQ 64
Query: 351 AEEKLAQAQAKGDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAVEKDF 530
EEKL +A +KG++ I L PALKFNGGGHINHSIFW NL+ +GG+PS L A++ DF
Sbjct: 65 IEEKLHEAVSKGNVKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSAELLTAIKSDF 124
Query: 531 GSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVP 689
GS DNL+ QLS ++VAVQGSGWGWLGY + K L++ATC NQDPL+ATTGLVP
Sbjct: 125 GSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKILKVATCANQDPLEATTGLVP 177
Score = 77.4 bits (182), Expect = 1e-14
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = +1
Query: 688 PLFGIDVWEHAYYLQYKNVRADYVKAIFDVAXWNDISQRYEKA 816
PLFGIDVWEHAYYLQYKNVR DYV AI+ +A W ++S+R+ KA
Sbjct: 177 PLFGIDVWEHAYYLQYKNVRPDYVNAIWKIANWKNVSERFAKA 219
>X85790-1|CAA59790.1| 218|Caenorhabditis elegans mangenese
superoxide dismutase protein.
Length = 218
Score = 221 bits (540), Expect = 5e-58
Identities = 104/162 (64%), Positives = 126/162 (77%), Gaps = 2/162 (1%)
Frame = +3
Query: 210 VAG--ASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK 383
VAG A R KHTLP+LP++Y LEPVIS EIM LHH KHHATY+NNLN EEKL +A +K
Sbjct: 16 VAGVLAVRSKHTLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSK 75
Query: 384 GDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAVEKDFGSWDNLKNQLS 563
G++ I L PALKFNGGGHINHSIFW NL+ +GG+PS L +++DFGS DNL+ +LS
Sbjct: 76 GNLKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSKELMDTIKRDFGSLDNLQKRLS 135
Query: 564 TASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVP 689
++AVQGSGWGWLGY K+ K L+IATC NQDPL+ G+VP
Sbjct: 136 DITIAVQGSGWGWLGYCKKDKILKIATCANQDPLE---GMVP 174
Score = 75.4 bits (177), Expect = 5e-14
Identities = 31/43 (72%), Positives = 36/43 (83%)
Frame = +1
Query: 688 PLFGIDVWEHAYYLQYKNVRADYVKAIFDVAXWNDISQRYEKA 816
PLFGIDVWEHAYYLQYKNVR DYV AI+ +A W +IS+R+ A
Sbjct: 174 PLFGIDVWEHAYYLQYKNVRPDYVHAIWKIANWKNISERFANA 216
>X77021-1|CAA54319.1| 218|Caenorhabditis elegans manganese
superoxide dismutase protein.
Length = 218
Score = 221 bits (540), Expect = 5e-58
Identities = 104/162 (64%), Positives = 126/162 (77%), Gaps = 2/162 (1%)
Frame = +3
Query: 210 VAG--ASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK 383
VAG A R KHTLP+LP++Y LEPVIS EIM LHH KHHATY+NNLN EEKL +A +K
Sbjct: 16 VAGVLAVRSKHTLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSK 75
Query: 384 GDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAVEKDFGSWDNLKNQLS 563
G++ I L PALKFNGGGHINHSIFW NL+ +GG+PS L +++DFGS DNL+ +LS
Sbjct: 76 GNLKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSKELMDTIKRDFGSLDNLQKRLS 135
Query: 564 TASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVP 689
++AVQGSGWGWLGY K+ K L+IATC NQDPL+ G+VP
Sbjct: 136 DITIAVQGSGWGWLGYCKKDKILKIATCANQDPLE---GMVP 174
Score = 75.4 bits (177), Expect = 5e-14
Identities = 31/43 (72%), Positives = 36/43 (83%)
Frame = +1
Query: 688 PLFGIDVWEHAYYLQYKNVRADYVKAIFDVAXWNDISQRYEKA 816
PLFGIDVWEHAYYLQYKNVR DYV AI+ +A W +IS+R+ A
Sbjct: 174 PLFGIDVWEHAYYLQYKNVRPDYVHAIWKIANWKNISERFANA 216
>U42844-5|AAB53822.1| 218|Caenorhabditis elegans Sod (superoxide
dismutase) protein3 protein.
Length = 218
Score = 221 bits (540), Expect = 5e-58
Identities = 104/162 (64%), Positives = 126/162 (77%), Gaps = 2/162 (1%)
Frame = +3
Query: 210 VAG--ASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK 383
VAG A R KHTLP+LP++Y LEPVIS EIM LHH KHHATY+NNLN EEKL +A +K
Sbjct: 16 VAGVLAVRSKHTLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSK 75
Query: 384 GDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAVEKDFGSWDNLKNQLS 563
G++ I L PALKFNGGGHINHSIFW NL+ +GG+PS L +++DFGS DNL+ +LS
Sbjct: 76 GNLKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSKELMDTIKRDFGSLDNLQKRLS 135
Query: 564 TASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVP 689
++AVQGSGWGWLGY K+ K L+IATC NQDPL+ G+VP
Sbjct: 136 DITIAVQGSGWGWLGYCKKDKILKIATCANQDPLE---GMVP 174
Score = 75.4 bits (177), Expect = 5e-14
Identities = 31/43 (72%), Positives = 36/43 (83%)
Frame = +1
Query: 688 PLFGIDVWEHAYYLQYKNVRADYVKAIFDVAXWNDISQRYEKA 816
PLFGIDVWEHAYYLQYKNVR DYV AI+ +A W +IS+R+ A
Sbjct: 174 PLFGIDVWEHAYYLQYKNVRPDYVHAIWKIANWKNISERFANA 216
>Z81545-2|CAB04438.1| 212|Caenorhabditis elegans Hypothetical
protein F49H6.2 protein.
Length = 212
Score = 33.1 bits (72), Expect = 0.28
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +2
Query: 551 ESTVDSFCGSTGLRLGLAWLQQTNEEIANSYMPEPGSSAGHHWIGPRSSESMYGSTRTIF 730
+ T DS C S G L Q+ + +ANS++ G+S+ WIG + + S T
Sbjct: 90 QPTADSLCSSEGAVLSSIQSQEELDYMANSFIALNGASSA-FWIGAERTAACMSSGLTAT 148
Query: 731 STR 739
TR
Sbjct: 149 CTR 151
>Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical
protein ZK896.7 protein.
Length = 380
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 554 STVDSFCGSTGLRLGLAWLQQTNEEIANSYMPEPGSSAGHHWIG 685
+T +C S G L T+ +A+S E GS+ G WIG
Sbjct: 45 NTAKEYCDSHGYSLATVDNAITSNFLASSAATEFGSNNGQFWIG 88
>AC006603-7|ABB51201.1| 576|Caenorhabditis elegans Hypothetical
protein B0524.7 protein.
Length = 576
Score = 28.3 bits (60), Expect = 7.8
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 6/76 (7%)
Frame = +3
Query: 333 INNLNVAEEKLAQAQAKGDIDTIINLAPALKFNGGGHINHSIF---WH---NLSPNGGKP 494
+ N K A+ K + N + LK NG INH + W + NG P
Sbjct: 358 LRNAKQKAAKRARKLVKNWKKSAQNKSGVLKINGNHVINHDVVVKKWKVELKIEGNGESP 417
Query: 495 SDVLTKAVEKDFGSWD 542
V+ KA E G WD
Sbjct: 418 RKVVRKAKETS-GYWD 432
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,476,800
Number of Sequences: 27780
Number of extensions: 427207
Number of successful extensions: 1143
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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