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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_D19
         (895 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g10920.1 68416.m01317 superoxide dismutase [Mn], mitochondria...   181   5e-46
At3g56350.1 68416.m06266 superoxide dismutase [Mn], putative / m...   166   2e-41
At5g51100.1 68418.m06335 superoxide dismutase [Fe], putative / i...   100   3e-21
At5g23310.1 68418.m02727 superoxide dismutase [Fe] / iron supero...    91   9e-19
At4g25100.3 68417.m03608 superoxide dismutase [Fe], chloroplast ...    84   1e-16
At4g25100.2 68417.m03607 superoxide dismutase [Fe], chloroplast ...    84   1e-16
At4g25100.1 68417.m03606 superoxide dismutase [Fe], chloroplast ...    84   1e-16
At1g11170.2 68414.m01279 expressed protein contains Pfam profile...    30   2.4  
At1g11170.1 68414.m01280 expressed protein contains Pfam profile...    30   2.4  
At1g61240.2 68414.m06901 expressed protein contains Pfam profile...    29   3.1  
At1g61240.1 68414.m06900 expressed protein contains Pfam profile...    29   3.1  
At1g31140.1 68414.m03810 MADS-box protein (AGL63) similar to gb|...    29   4.2  
At3g11390.1 68416.m01387 DC1 domain-containing protein contains ...    29   5.5  
At1g11620.1 68414.m01334 F-box family protein contains F-box dom...    29   5.5  
At1g08040.1 68414.m00878 expressed protein contains Pfam profile...    29   5.5  
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ...    28   7.3  
At2g37890.1 68415.m04651 mitochondrial substrate carrier family ...    28   7.3  
At1g32950.1 68414.m04058 subtilase family protein contains simil...    28   7.3  
At1g08210.1 68414.m00907 aspartyl protease family protein contai...    28   7.3  

>At3g10920.1 68416.m01317 superoxide dismutase [Mn], mitochondrial
           (SODA) / manganese superoxide dismutase (MSD1) identical
           to manganese superoxide dismutase [Arabidopsis thaliana]
           gi|3273751|gb|AAC24832
          Length = 231

 Score =  181 bits (441), Expect = 5e-46
 Identities = 89/168 (52%), Positives = 112/168 (66%), Gaps = 5/168 (2%)
 Frame = +3

Query: 201 LIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQA 380
           L+R+ G   Q  TLP+LPY+Y ALEP IS EIM +HH KHH  Y+ N N A E+L QA  
Sbjct: 22  LLRIRGI--QTFTLPDLPYDYGALEPAISGEIMQIHHQKHHQAYVTNYNNALEQLDQAVN 79

Query: 381 KGDIDTIINLAPALKFNGGGHINHSIFWHNLSPN---GGK-PSDVLTKAVEKDFGSWDNL 548
           KGD  T++ L  A+KFNGGGH+NHSIFW NL+P+   GG+ P   L  A++  FGS + L
Sbjct: 80  KGDASTVVKLQSAIKFNGGGHVNHSIFWKNLAPSSEGGGEPPKGSLGSAIDAHFGSLEGL 139

Query: 549 KNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTG-LVP 689
             ++S    AVQGSGW WLG +K++KKL + T  NQDPL    G LVP
Sbjct: 140 VKKMSAEGAAVQGSGWVWLGLDKELKKLVVDTTANQDPLVTKGGSLVP 187



 Score = 65.3 bits (152), Expect = 5e-11
 Identities = 27/42 (64%), Positives = 32/42 (76%)
 Frame = +1

Query: 688 PLFGIDVWEHAYYLQYKNVRADYVKAIFDVAXWNDISQRYEK 813
           PL GIDVWEHAYYLQYKNVR +Y+K ++ V  W   S+ YEK
Sbjct: 187 PLVGIDVWEHAYYLQYKNVRPEYLKNVWKVINWKYASEVYEK 228


>At3g56350.1 68416.m06266 superoxide dismutase [Mn], putative /
           manganese superoxide dismutase, putative similar to
           manganese superoxide dismutase (MSD1) [Arabidopsis
           thaliana] gi|3273751|gb|AAC24832
          Length = 241

 Score =  166 bits (404), Expect = 2e-41
 Identities = 80/164 (48%), Positives = 105/164 (64%), Gaps = 6/164 (3%)
 Frame = +3

Query: 222 SRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDTI 401
           S +  +LP+LPY Y+ALEP IS EIM LHH KHH TY+   N A   L  A A GD  ++
Sbjct: 32  SMKTASLPDLPYAYDALEPAISEEIMRLHHQKHHQTYVTQYNKALNSLRSAMADGDHSSV 91

Query: 402 INLAPALKFNGGGHINHSIFWHNLSP---NGGK-PSDVLTKAVEKDFGSWDNLKNQLSTA 569
           + L   +KFNGGGH+NH+IFW NL+P    GGK P D L  A++  FGS + L  +++  
Sbjct: 92  VKLQSLIKFNGGGHVNHAIFWKNLAPVHEGGGKPPHDPLASAIDAHFGSLEGLIQKMNAE 151

Query: 570 SVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTG--LVPAL 695
             AVQGSGW W G ++++K+L + T  NQDPL  T G  LVP +
Sbjct: 152 GAAVQGSGWVWFGLDRELKRLVVETTANQDPL-VTKGSHLVPLI 194



 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 25/42 (59%), Positives = 30/42 (71%)
 Frame = +1

Query: 688 PLFGIDVWEHAYYLQYKNVRADYVKAIFDVAXWNDISQRYEK 813
           PL GIDVWEHAYY QYKN RA+Y+K I+ V  W   +  +EK
Sbjct: 192 PLIGIDVWEHAYYPQYKNARAEYLKNIWTVINWKYAADVFEK 233


>At5g51100.1 68418.m06335 superoxide dismutase [Fe], putative / iron
           superoxide dismutase, putative similar to Fe-superoxide
           dismutase precursor [Medicago sativa]
           gi|16974682|gb|AAL32441
          Length = 305

 Score = 99.5 bits (237), Expect = 3e-21
 Identities = 57/175 (32%), Positives = 89/175 (50%), Gaps = 8/175 (4%)
 Frame = +3

Query: 186 QRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKL 365
           +R+G+ + V+G       L   PY  +ALEP +SRE +  H  KHH TY+ NLN  ++ L
Sbjct: 37  RRLGTKVAVSGVITAGFELKPPPYPLDALEPHMSRETLDYHWGKHHKTYVENLN--KQIL 94

Query: 366 AQAQAKGDIDTII-------NLAPALKFNGGGHINHSIFWHNLSP-NGGKPSDVLTKAVE 521
                   ++ ++       N+ PA   N     NH  FW ++ P  GGKP+  L + +E
Sbjct: 95  GTDLDALSLEEVVLLSYNKGNMLPAFN-NAAQAWNHEFFWESIQPGGGGKPTGELLRLIE 153

Query: 522 KDFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLV 686
           +DFGS++    +  +A+ +  GSGW WL Y  +  +L +A   N  P +    LV
Sbjct: 154 RDFGSFEEFLERFKSAAASNFGSGWTWLAY--KANRLDVANAVNPLPKEEDKKLV 206



 Score = 55.2 bits (127), Expect = 6e-08
 Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
 Frame = +1

Query: 679 DWSPLFGIDVWEHAYYLQYKNVRADYVKAIFD-VAXWNDISQRYEKAL 819
           D+SPL  ID WEHAYYL ++N RA+Y+    + +  W  +S R E A+
Sbjct: 220 DYSPLLTIDTWEHAYYLDFENRRAEYINTFMEKLVSWETVSTRLESAI 267


>At5g23310.1 68418.m02727 superoxide dismutase [Fe] / iron
           superoxide dismutase 3 (FSD3) identical to iron
           superoxide dismutase 3 [Arabidopsis thaliana]
           gi|3273757|gb|AAC24834
          Length = 263

 Score = 91.1 bits (216), Expect = 9e-19
 Identities = 45/140 (32%), Positives = 75/140 (53%), Gaps = 6/140 (4%)
 Frame = +3

Query: 252 PYEYNALEPVISREIMSLHHSKHHATYINNLNVA---EEKLAQAQAKGDIDTIINLA-PA 419
           PY  +ALEP +SR  + +H  KHH  Y++NLN     +++L     +  I    N   P 
Sbjct: 56  PYPLDALEPYMSRRTLEVHWGKHHRGYVDNLNKQLGKDDRLYGYTMEELIKATYNNGNPL 115

Query: 420 LKFNGGGHI-NHSIFWHNLSPNGGK-PSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGSG 593
            +FN    + NH  FW ++ P GG  P   + + ++KDFGS+ N + + + A++   GSG
Sbjct: 116 PEFNNAAQVYNHDFFWESMQPGGGDTPQKGVLEQIDKDFGSFTNFREKFTNAALTQFGSG 175

Query: 594 WGWLGYNKQMKKLQIATCQN 653
           W WL   ++ ++L++    N
Sbjct: 176 WVWLVLKREERRLEVVKTSN 195



 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = +1

Query: 673 PLDWS--PLFGIDVWEHAYYLQYKNVRADYVKAIFD-VAXWNDISQRYEKA 816
           PL W   P+  +DVWEH+YYL YKN RA Y+    + +  WN    R  +A
Sbjct: 199 PLVWDDIPIICVDVWEHSYYLDYKNDRAKYINTFLNHLVSWNAAMSRMARA 249


>At4g25100.3 68417.m03608 superoxide dismutase [Fe], chloroplast
           (SODB) / iron superoxide dismutase (FSD1) identical to
           Fe-superoxide dismutase [Arabidopsis thaliana]
           gi|166700|gb|AAA32791; supported by cDNA, Ceres:32935
          Length = 212

 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
 Frame = +3

Query: 213 AGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLN--VAEEKLAQAQAKG 386
           + A    + L   P+  +ALEP +S++ +  H  KHH  Y++NL   V   +L     + 
Sbjct: 4   SSAVTANYVLKPPPFALDALEPHMSKQTLEFHWGKHHRAYVDNLKKQVLGTELEGKPLEH 63

Query: 387 DIDTIINLAPALK-FNGGGHI-NHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQ 557
            I +  N    L  FN      NH  FW ++ P GG KPS  L   +E+DF S++    +
Sbjct: 64  IIHSTYNNGDLLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLALLERDFTSYEKFYEE 123

Query: 558 LSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPL 665
            + A+    G+GW WL Y+ +  K+ + T    +PL
Sbjct: 124 FNAAAATQFGAGWAWLAYSNEKLKV-VKTPNAVNPL 158



 Score = 51.6 bits (118), Expect = 7e-07
 Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
 Frame = +1

Query: 688 PLFGIDVWEHAYYLQYKNVRADYVKAIF-DVAXWNDISQRYEKA 816
           PL  IDVWEHAYYL ++N R DY+K    ++  W  +S R E A
Sbjct: 164 PLLTIDVWEHAYYLDFQNRRPDYIKTFMTNLVSWEAVSARLEAA 207


>At4g25100.2 68417.m03607 superoxide dismutase [Fe], chloroplast
           (SODB) / iron superoxide dismutase (FSD1) identical to
           Fe-superoxide dismutase [Arabidopsis thaliana]
           gi|166700|gb|AAA32791; supported by cDNA, Ceres:32935
          Length = 212

 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
 Frame = +3

Query: 213 AGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLN--VAEEKLAQAQAKG 386
           + A    + L   P+  +ALEP +S++ +  H  KHH  Y++NL   V   +L     + 
Sbjct: 4   SSAVTANYVLKPPPFALDALEPHMSKQTLEFHWGKHHRAYVDNLKKQVLGTELEGKPLEH 63

Query: 387 DIDTIINLAPALK-FNGGGHI-NHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQ 557
            I +  N    L  FN      NH  FW ++ P GG KPS  L   +E+DF S++    +
Sbjct: 64  IIHSTYNNGDLLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLALLERDFTSYEKFYEE 123

Query: 558 LSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPL 665
            + A+    G+GW WL Y+ +  K+ + T    +PL
Sbjct: 124 FNAAAATQFGAGWAWLAYSNEKLKV-VKTPNAVNPL 158



 Score = 51.6 bits (118), Expect = 7e-07
 Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
 Frame = +1

Query: 688 PLFGIDVWEHAYYLQYKNVRADYVKAIF-DVAXWNDISQRYEKA 816
           PL  IDVWEHAYYL ++N R DY+K    ++  W  +S R E A
Sbjct: 164 PLLTIDVWEHAYYLDFQNRRPDYIKTFMTNLVSWEAVSARLEAA 207


>At4g25100.1 68417.m03606 superoxide dismutase [Fe], chloroplast
           (SODB) / iron superoxide dismutase (FSD1) identical to
           Fe-superoxide dismutase [Arabidopsis thaliana]
           gi|166700|gb|AAA32791; supported by cDNA, Ceres:32935
          Length = 212

 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
 Frame = +3

Query: 213 AGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLN--VAEEKLAQAQAKG 386
           + A    + L   P+  +ALEP +S++ +  H  KHH  Y++NL   V   +L     + 
Sbjct: 4   SSAVTANYVLKPPPFALDALEPHMSKQTLEFHWGKHHRAYVDNLKKQVLGTELEGKPLEH 63

Query: 387 DIDTIINLAPALK-FNGGGHI-NHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQ 557
            I +  N    L  FN      NH  FW ++ P GG KPS  L   +E+DF S++    +
Sbjct: 64  IIHSTYNNGDLLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLALLERDFTSYEKFYEE 123

Query: 558 LSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPL 665
            + A+    G+GW WL Y+ +  K+ + T    +PL
Sbjct: 124 FNAAAATQFGAGWAWLAYSNEKLKV-VKTPNAVNPL 158



 Score = 51.6 bits (118), Expect = 7e-07
 Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
 Frame = +1

Query: 688 PLFGIDVWEHAYYLQYKNVRADYVKAIF-DVAXWNDISQRYEKA 816
           PL  IDVWEHAYYL ++N R DY+K    ++  W  +S R E A
Sbjct: 164 PLLTIDVWEHAYYLDFQNRRPDYIKTFMTNLVSWEAVSARLEAA 207


>At1g11170.2 68414.m01279 expressed protein contains Pfam profile
           PF05212: Protein of unknown function (DUF707)
          Length = 335

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
 Frame = +2

Query: 428 QWW---WSHQPLDLLAQPVTKWWQA 493
           +WW   WS + + ++AQ  TKWW A
Sbjct: 157 KWWDLEWSSKSIHIVAQNQTKWWFA 181


>At1g11170.1 68414.m01280 expressed protein contains Pfam profile
           PF05212: Protein of unknown function (DUF707)
          Length = 438

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
 Frame = +2

Query: 428 QWW---WSHQPLDLLAQPVTKWWQA 493
           +WW   WS + + ++AQ  TKWW A
Sbjct: 157 KWWDLEWSSKSIHIVAQNQTKWWFA 181


>At1g61240.2 68414.m06901 expressed protein contains Pfam profile
           PF05212: Protein of unknown function (DUF707)
          Length = 425

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
 Frame = +2

Query: 428 QWW---WSHQPLDLLAQPVTKWWQA 493
           QWW   WS + + ++A   TKWW A
Sbjct: 154 QWWDLEWSSKAIHIVAHNQTKWWFA 178


>At1g61240.1 68414.m06900 expressed protein contains Pfam profile
           PF05212: Protein of unknown function (DUF707)
          Length = 425

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
 Frame = +2

Query: 428 QWW---WSHQPLDLLAQPVTKWWQA 493
           QWW   WS + + ++A   TKWW A
Sbjct: 154 QWWDLEWSSKAIHIVAHNQTKWWFA 178


>At1g31140.1 68414.m03810 MADS-box protein (AGL63) similar to
           gb|Y15008 M79 protein (MADS box) from oryza sativa and
           contains SRF transcription factor domain PF|00319
          Length = 213

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +3

Query: 582 QGSGWGWLGYNKQMKKLQIATCQNQ-DPLQATTGLVPALR 698
           QGS W  L +  +    Q+ TCQ Q DP  A  G VP LR
Sbjct: 166 QGSSWEQLMWQAER---QMMTCQRQKDPAPANEGGVPFLR 202


>At3g11390.1 68416.m01387 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 710

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 664 RGSWFWHVAICNFFICLL*PSQPQP 590
           +G+WF+H  ICNF + L    Q  P
Sbjct: 241 QGNWFYHCPICNFCLDLSCSQQSVP 265


>At1g11620.1 68414.m01334 F-box family protein contains F-box domain
           Pfam:PF00646
          Length = 363

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = +3

Query: 495 SDVLTKAVEKDFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKKL 632
           SD     V+ +FG +D L      +SV ++G+ + WLGYNK   +L
Sbjct: 181 SDSWKVVVDTNFGGFDGLP----LSSVCLRGTPY-WLGYNKSGNEL 221


>At1g08040.1 68414.m00878 expressed protein contains Pfam profile
           PF05212: Protein of unknown function (DUF707)
          Length = 382

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 398 HYQPCTSLEIQWWWSHQPLDLLAQPVTKWWQA 493
           HY   T+   Q+ WS   + + A+  TKWW A
Sbjct: 155 HYDGRTTEWDQFEWSKNAIHISAKKQTKWWYA 186


>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
           bromodomain-containing protein low similarity to
           SP|P51123 Transcription initiation factor TFIID 230 kDa
           subunit {Drosophila melanogaster}; contains Pfam
           profiles: PF00439 bromodomain, PF00240: Ubiquitin family
          Length = 1700

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 15/64 (23%), Positives = 29/64 (45%)
 Frame = +3

Query: 216 GASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAKGDID 395
           G   ++H   E  ++    EPV+ +E   + H K  A+ + N N  +    Q  +K D +
Sbjct: 27  GGQEKEHVPVEKSFDSEEREPVVLKEEKPVKHEK-EASILGNKNQMDTGDVQEVSKNDFE 85

Query: 396 TIIN 407
             ++
Sbjct: 86  ATLD 89


>At2g37890.1 68415.m04651 mitochondrial substrate carrier family
           protein contains Pfam profile: PF00153 mitochondrial
           carrier protein
          Length = 337

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +3

Query: 381 KGDIDTIINLAPALKFNGGGHINHSIFWHNLSPN 482
           KG   T++ + P+L  N   + +  +FWH+  PN
Sbjct: 206 KGLGATLLGVGPSLAINFAAYESMKLFWHSHRPN 239


>At1g32950.1 68414.m04058 subtilase family protein contains
           similarity to SBT1 GI:1771160 from [Lycopersicon
           esculentum]
          Length = 773

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -1

Query: 532 PKSFSTALVRTSEGLPPFGDRLCQKIEWLM*PPPLNFKAG 413
           P +F +A+V T+    PFG+++  +   L  P P ++  G
Sbjct: 573 PAAFRSAIVTTAWRTDPFGEQIAAESSSLKVPDPFDYGGG 612


>At1g08210.1 68414.m00907 aspartyl protease family protein contains
           Pfam profile PF00026: Eukaryotic aspartyl protease;
           similar to CND41, chloroplast nucleoid DNA binding
           protein (GI:2541876) {Nicotiana tabacum}
          Length = 492

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -3

Query: 536 GSKVFLNGFGENIRRLATIW*QVVPKDRVVDVTTTIEFQGWCKVDNGVDITFS 378
           GS ++  GF     R  TI   +V KD+VV      +  GW + D  +++  S
Sbjct: 395 GSSIWCIGFQRMSHRRITILGDLVLKDKVVVYDLVRQRIGWAEYDCSLEVNVS 447


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,295,032
Number of Sequences: 28952
Number of extensions: 403998
Number of successful extensions: 1144
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1132
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2100696768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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