Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_D17
(872 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56; Fu... 200 5e-50
UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158; Eukar... 200 5e-50
UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p ... 198 2e-49
UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1... 162 9e-39
UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=... 161 2e-38
UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep: R... 159 9e-38
UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1; Aspergi... 159 1e-37
UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=... 144 3e-33
UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101, w... 136 9e-31
UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4; Eukaryo... 120 6e-26
UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417... 117 4e-25
UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S riboso... 101 2e-20
UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lambl... 99 7e-20
UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;... 98 3e-19
UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella ve... 89 2e-16
UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;... 86 1e-15
UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1; ... 85 2e-15
UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 80 6e-14
UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella... 78 3e-13
UniRef50_UPI00015533B4 Cluster: PREDICTED: similar to ribosomal ... 76 1e-12
UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3; Catarrhi... 54 6e-06
UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16; Archa... 47 5e-04
UniRef50_P35025 Cluster: 50S ribosomal protein L11P; n=15; Archa... 46 0.001
UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9; Archae... 44 0.007
UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4; Euryar... 43 0.012
UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1; ... 40 0.11
UniRef50_P62446 Cluster: 50S ribosomal protein L11P; n=1; Nanoar... 38 0.33
UniRef50_A3B9H4 Cluster: Putative uncharacterized protein; n=3; ... 38 0.44
UniRef50_Q9VGN4 Cluster: CG31374-PB, isoform B; n=4; Sophophora|... 34 5.4
>UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56;
Fungi/Metazoa group|Rep: Ribosomal protein L12 variant -
Homo sapiens (Human)
Length = 197
Score = 200 bits (487), Expect = 5e-50
Identities = 92/105 (87%), Positives = 101/105 (96%)
Frame = +2
Query: 179 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 358
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV
Sbjct: 33 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 92
Query: 359 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNIS 493
+LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+
Sbjct: 93 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNIT 137
Score = 84.2 bits (199), Expect = 4e-15
Identities = 38/68 (55%), Positives = 51/68 (75%)
Frame = +3
Query: 456 KSRKISNTTATSPLXDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLI 635
K +K + +++ I + MR+RS+AR LSG++KEILGTAQSVGC V+GR PHD+I
Sbjct: 125 KKQKNIKHSGNITFDEIVNIVRQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDII 184
Query: 636 DDINSGAL 659
DDINSGA+
Sbjct: 185 DDINSGAV 192
>UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158;
Eukaryota|Rep: 60S ribosomal protein L12 - Homo sapiens
(Human)
Length = 165
Score = 200 bits (487), Expect = 5e-50
Identities = 92/105 (87%), Positives = 101/105 (96%)
Frame = +2
Query: 179 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 358
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 359 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNIS 493
+LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNIT 105
Score = 85.8 bits (203), Expect = 1e-15
Identities = 39/68 (57%), Positives = 52/68 (76%)
Frame = +3
Query: 456 KSRKISNTTATSPLXDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLI 635
K +K + +++ IA+ MR+RS+AR LSG++KEILGTAQSVGC V+GR PHD+I
Sbjct: 93 KKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDII 152
Query: 636 DDINSGAL 659
DDINSGA+
Sbjct: 153 DDINSGAV 160
>UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p -
Drosophila melanogaster (Fruit fly)
Length = 307
Score = 198 bits (483), Expect = 2e-49
Identities = 92/104 (88%), Positives = 100/104 (96%)
Frame = +2
Query: 179 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 358
MPPKFDP E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIAKATSDWKGLKITV
Sbjct: 143 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKITV 202
Query: 359 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNI 490
LT+QNRQA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+GNI
Sbjct: 203 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNI 246
Score = 81.8 bits (193), Expect = 2e-14
Identities = 33/55 (60%), Positives = 47/55 (85%)
Frame = +3
Query: 501 DVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGALTI 665
D++ IA++MR RSMAR L G+ KE+LGTAQSVGCTV+G+ PHD+ID++N G++ +
Sbjct: 250 DILAIARVMRPRSMARELKGTCKEVLGTAQSVGCTVDGKHPHDVIDELNEGSIEV 304
>UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1;
Ostreococcus tauri|Rep: Putative 60S ribosomal protein
L12 - Ostreococcus tauri
Length = 230
Score = 162 bits (394), Expect = 9e-39
Identities = 77/108 (71%), Positives = 92/108 (85%), Gaps = 1/108 (0%)
Frame = +2
Query: 176 KMPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATS-DWKGLKI 352
KMPPKFDPN + +R GGEVGA SSLAPKIGPLGLSPKKVG+DIAK T+ DWKGL++
Sbjct: 62 KMPPKFDPNATLEIFMRATGGEVGAASSLAPKIGPLGLSPKKVGEDIAKETAKDWKGLRV 121
Query: 353 TVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISL 496
TV+LTVQNRQA+++VVP+A+AL+I+ALKEP +DRKK K I H GN SL
Sbjct: 122 TVKLTVQNRQAKVSVVPTASALVIKALKEPFQDRKKVKGITHTGNCSL 169
Score = 54.0 bits (124), Expect = 5e-06
Identities = 24/42 (57%), Positives = 33/42 (78%)
Frame = +3
Query: 480 TATSPLXDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCT 605
T L D+I +A++MR +S A+ L+G+VKEILGTA+SVGCT
Sbjct: 164 TGNCSLDDIIEVARVMRPKSCAKNLAGTVKEILGTAKSVGCT 205
>UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=3;
Trypanosoma|Rep: 60S ribosomal protein L12, putative -
Trypanosoma brucei
Length = 219
Score = 161 bits (391), Expect = 2e-38
Identities = 74/106 (69%), Positives = 89/106 (83%)
Frame = +2
Query: 176 KMPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKIT 355
KMPPKFDPN+ V +R VGGEV AT+SLAPK+GPLGL+ KK+G+DIAK+T DWKGLK+T
Sbjct: 55 KMPPKFDPNQEITVVVRAVGGEVPATASLAPKVGPLGLNAKKIGEDIAKSTKDWKGLKVT 114
Query: 356 VQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNIS 493
QL V+NR A + V PS A+ +IRALKEPPRDRKK KNIKH+GNI+
Sbjct: 115 CQLRVKNRVATVIVTPSVASRLIRALKEPPRDRKKVKNIKHDGNIA 160
Score = 44.4 bits (100), Expect = 0.004
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +3
Query: 501 DVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGALTI 665
+++ IAK SM + V E+LGTA S+GCT++G P + + + G L +
Sbjct: 163 EILKIAKESAPNSMGASMKSVVMEVLGTAVSIGCTIDGEHPRAIQEKVQEGKLKV 217
>UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep:
Rpl12 protein - Mus musculus (Mouse)
Length = 218
Score = 159 bits (386), Expect = 9e-38
Identities = 75/85 (88%), Positives = 81/85 (95%)
Frame = +2
Query: 215 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIA 394
V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+LT+QNRQAQI
Sbjct: 106 VYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIE 165
Query: 395 VVPSAAALIIRALKEPPRDRKKQKN 469
VVPSA+ALII+ALKEPPRDRKKQKN
Sbjct: 166 VVPSASALIIKALKEPPRDRKKQKN 190
>UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1;
Aspergillus terreus NIH2624|Rep: 60S ribosomal protein
L12 - Aspergillus terreus (strain NIH 2624)
Length = 189
Score = 159 bits (385), Expect = 1e-37
Identities = 79/130 (60%), Positives = 98/130 (75%), Gaps = 24/130 (18%)
Frame = +2
Query: 179 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDW------- 337
MPPKFDPNE+K+++LR GGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DW
Sbjct: 1 MPPKFDPNEVKVIHLRVTGGEVGAQSALAPKIGPLGLSPKKIGEDIAKNTGDWVSTQYGC 60
Query: 338 -----------------KGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQK 466
KGL++TV+LT+QNRQA ++VVPSA++L+I+ALKEPPRDRKK+K
Sbjct: 61 CDARKEQWLTWTVSAVQKGLRVTVKLTIQNRQAAVSVVPSASSLVIKALKEPPRDRKKEK 120
Query: 467 NIKHNGNISL 496
NIKHN +I L
Sbjct: 121 NIKHNKSIPL 130
Score = 72.5 bits (170), Expect = 1e-11
Identities = 35/70 (50%), Positives = 47/70 (67%)
Frame = +3
Query: 456 KSRKISNTTATSPLXDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLI 635
K K + PL D+I IA+ MR+RS+A+ L G+V EILGTA SVGC V+GR P D+
Sbjct: 117 KKEKNIKHNKSIPLDDIIEIARTMRSRSLAKELKGTVLEILGTAFSVGCQVDGRSPKDVS 176
Query: 636 DDINSGALTI 665
DD+ +G + I
Sbjct: 177 DDVKAGEIDI 186
>UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L12, putative -
Plasmodium chabaudi
Length = 177
Score = 144 bits (348), Expect = 3e-33
Identities = 64/94 (68%), Positives = 81/94 (86%)
Frame = +2
Query: 215 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIA 394
V +R VGGEVGA+S L+PK+GPLGLSPKK+GDDIAK T WKGLKI V+LT+QNRQA+I
Sbjct: 25 VYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSWKGLKICVKLTIQNRQAKIE 84
Query: 395 VVPSAAALIIRALKEPPRDRKKQKNIKHNGNISL 496
VVP++A+++++ L E PRDRKK KNIKHNGN+ +
Sbjct: 85 VVPTSASMVLKELNEAPRDRKKVKNIKHNGNLKI 118
Score = 54.4 bits (125), Expect = 4e-06
Identities = 23/59 (38%), Positives = 39/59 (66%)
Frame = +3
Query: 495 LXDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGALTIDE 671
+ V IA+ M+ +S A+ G+VKEILGT S+GCTV+G+ P + + I++G + + +
Sbjct: 118 IEQVYSIARAMKEKSRAKEFRGTVKEILGTCNSIGCTVDGKKPTTIQEMIDNGDIDVPD 176
>UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 164
Score = 136 bits (328), Expect = 9e-31
Identities = 56/106 (52%), Positives = 81/106 (76%)
Frame = +2
Query: 179 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 358
MPPK DPNE++++N++ GGE G S+LAPK+GPLGL+PK+VGD I + WKG+++ V
Sbjct: 1 MPPKVDPNEVRLINIKVFGGEGGPASTLAPKLGPLGLNPKQVGDKIIAESGKWKGIRVMV 60
Query: 359 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISL 496
L QNR A + V+P+++AL+I+ + RDRKK KN+KHNGN++L
Sbjct: 61 NLRCQNRNADVTVIPTSSALLIKEIGGYERDRKKTKNVKHNGNLTL 106
Score = 60.1 bits (139), Expect = 7e-08
Identities = 26/59 (44%), Positives = 43/59 (72%)
Frame = +3
Query: 495 LXDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGALTIDE 671
L VI +A+ + +S+A+ +G+VK++LGTAQS+G TV+G+P +I INSG L +++
Sbjct: 106 LEQVIKVARAVEEKSLAKTFTGTVKQVLGTAQSLGATVDGQPVKAIIGKINSGELKVEK 164
>UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4;
Eukaryota|Rep: 60S ribosomal protein L12 -
Encephalitozoon cuniculi
Length = 166
Score = 120 bits (288), Expect = 6e-26
Identities = 60/102 (58%), Positives = 80/102 (78%), Gaps = 1/102 (0%)
Frame = +2
Query: 194 DPNEIKIVNLRCVGGEV-GATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV 370
DP + K + L+ VGGEV GAT LA ++GPLGLS K VG+DI KAT+D+K LK+ VQL +
Sbjct: 8 DP-DTKYIKLQVVGGEVPGAT--LAQRVGPLGLSSKVVGEDIKKATADYKSLKVHVQLAI 64
Query: 371 QNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISL 496
++R+A + V PS A LII++LKEPPRDRKK+KNI HNG++ +
Sbjct: 65 KDRKATVEVQPSVATLIIKSLKEPPRDRKKEKNILHNGSLRM 106
Score = 55.2 bits (127), Expect = 2e-06
Identities = 24/60 (40%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = +3
Query: 495 LXDVIGIAKIMRN-RSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGALTIDE 671
+ +V+ IA+I R+ RS + LSG+VKE+LGT +S+GC V+G+ P ++ +I++G + + +
Sbjct: 106 MTEVVDIARIARSSRSYSNSLSGTVKEVLGTCKSIGCKVDGKCPKEVTREIDAGEIKLPD 165
>UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417C
precursor; n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YDR417C precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 123
Score = 117 bits (281), Expect = 4e-25
Identities = 59/99 (59%), Positives = 67/99 (67%)
Frame = -3
Query: 489 MLPLCLIFFCFLRSRGGSLRALMIRAAAEGTTAIWACLF*TVSCTVILRPFQSLVALAMS 310
MLPLCL F F S GGS +A+M + A+GTT ACLF + TV L P SLVALA+S
Sbjct: 1 MLPLCLTFLSFFLSLGGSFKAVMTKEEADGTTEAAACLFWIFNWTVTLIPLNSLVALAIS 60
Query: 309 SPTFLGDRPRGPILGAKDDVAPTSPPTHRKFTILISFGS 193
SPTF GD+P GPI GAK APTSPPT K+ L SFGS
Sbjct: 61 SPTFFGDKPNGPIFGAKAAEAPTSPPTALKYKYLTSFGS 99
>UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S ribosomal
protein L12; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L12 - Macaca mulatta
Length = 268
Score = 101 bits (243), Expect = 2e-20
Identities = 61/103 (59%), Positives = 67/103 (65%)
Frame = +2
Query: 185 PKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQL 364
PKF P EIK+ LRC G EV A S+LAPKI PLGLSPK KG
Sbjct: 131 PKFGPKEIKVAYLRCTGDEVSAMSALAPKISPLGLSPK-------------KG------- 170
Query: 365 TVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNIS 493
QAQI VVPSA+ALII+ALKEP RDRKKQKNIKH+GNI+
Sbjct: 171 -----QAQIEVVPSASALIIKALKEPARDRKKQKNIKHSGNIT 208
Score = 78.2 bits (184), Expect = 3e-13
Identities = 33/53 (62%), Positives = 46/53 (86%)
Frame = +3
Query: 501 DVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGAL 659
+++ IA+ MR+RS+ R LSG++KE+LGTAQS+GC V+GR PH +IDDINSGA+
Sbjct: 211 EIVNIARQMRHRSLDRELSGTIKELLGTAQSLGCNVDGRHPHKIIDDINSGAV 263
>UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_243_12971_12423 - Giardia lamblia
ATCC 50803
Length = 182
Score = 99 bits (238), Expect = 7e-20
Identities = 45/104 (43%), Positives = 71/104 (68%)
Frame = +2
Query: 179 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 358
MPP+ DPN ++ LR GG + A ++L PKIGP GL PK VG+ I +AT +KG+++ V
Sbjct: 1 MPPRADPNAEIVLYLRVKGGIIPAPNALGPKIGPYGLPPKVVGEKIHEATQGYKGIRVKV 60
Query: 359 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNI 490
++ +NRQ ++VVP+A++L+++AL E PR K + + H G +
Sbjct: 61 RIVSKNRQPTVSVVPTASSLLVKALGEGPRTIPKGQPLLHTGTV 104
Score = 43.6 bits (98), Expect = 0.007
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Frame = +3
Query: 480 TATSPLXDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGR----PPHDLIDDIN 647
T T V+ IAK +R S A +G+V E+LG+A+SVGC VE + P ++ + +
Sbjct: 101 TGTVKFDTVLDIAKELRANSFALKYAGTVLEVLGSARSVGCKVEYKGTVYSPAEITEMVK 160
Query: 648 SGALTIDE 671
+G + I E
Sbjct: 161 AGDIEIPE 168
>UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 169
Score = 97.9 bits (233), Expect = 3e-19
Identities = 51/106 (48%), Positives = 68/106 (64%)
Frame = -2
Query: 496 KGDVAVVFDIFLLFTVTRRLLKGSDDKGCCRGNNSYLGLSVLNCQLHSDLETLPVTCGLG 317
KGDV+ V +FLL +V+ L+G DD+G R + L LSVL+ Q HSD +TLP+T LG
Sbjct: 44 KGDVSTVLYVFLLLSVSWWFLEGFDDQGRGRRYHLNLSLSVLDRQFHSDPQTLPITSCLG 103
Query: 316 NVITHLFRRQTKRTDFRGQR*CGTDFPADTSQIHDFNFIWVKLRGH 179
+VI HLF RQT+ + GQ GTD P Q+HDF+ + V+L H
Sbjct: 104 DVIAHLFWRQTQGANLGGQGRRGTDVPTGAPQVHDFDLVGVELGWH 149
>UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 136
Score = 88.6 bits (210), Expect = 2e-16
Identities = 40/59 (67%), Positives = 49/59 (83%)
Frame = +3
Query: 495 LXDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGALTIDE 671
L DV +AK+MR RSMAR+LSG+VKEILGT QSVGCTV+G PHD+ID INSG + I++
Sbjct: 76 LDDVTNVAKVMRPRSMARHLSGTVKEILGTCQSVGCTVDGMAPHDVIDKINSGEIEIED 134
Score = 66.9 bits (156), Expect = 6e-10
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +2
Query: 179 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGL 289
MPPKF+ NEI+ V LRC GGEVGAT+SLAPKIGPLGL
Sbjct: 1 MPPKFELNEIQYVYLRCTGGEVGATASLAPKIGPLGL 37
>UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 255
Score = 85.8 bits (203), Expect = 1e-15
Identities = 39/68 (57%), Positives = 52/68 (76%)
Frame = +3
Query: 456 KSRKISNTTATSPLXDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLI 635
K +K + +++ IA+ MR+RS+AR LSG++KEILGTAQSVGC V+GR PHD+I
Sbjct: 183 KKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDII 242
Query: 636 DDINSGAL 659
DDINSGA+
Sbjct: 243 DDINSGAV 250
Score = 45.6 bits (103), Expect = 0.002
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +2
Query: 428 ALKEPPRDRKKQKNIKHNGNIS 493
A KEPPRDRKKQKNIKH+GNI+
Sbjct: 174 AKKEPPRDRKKQKNIKHSGNIT 195
>UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 84
Score = 85.0 bits (201), Expect = 2e-15
Identities = 39/52 (75%), Positives = 45/52 (86%)
Frame = +2
Query: 212 IVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLT 367
IV +R VGGEVGA+S L+PK+GPLGLSPKK+GDDIAK T WKGLKI V+LT
Sbjct: 33 IVYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSWKGLKICVKLT 84
>UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 202
Score = 80.2 bits (189), Expect = 6e-14
Identities = 42/105 (40%), Positives = 64/105 (60%)
Frame = -2
Query: 487 VAVVFDIFLLFTVTRRLLKGSDDKGCCRGNNSYLGLSVLNCQLHSDLETLPVTCGLGNVI 308
V VFD+ +L +V+ L+ D++ NN LSVL+ QL+S+L+TL + GLG++
Sbjct: 78 VTTVFDVLVLLSVSWWFLQSGDNQRGSGWNNRSSSLSVLDLQLNSNLDTLEILGGLGDIF 137
Query: 307 THLFRRQTKRTDFRGQR*CGTDFPADTSQIHDFNFIWVKLRGHFV 173
T+L QT+ T+ Q T+F D+SQ+ +FIW+KL HFV
Sbjct: 138 TNLLWGQTQWTNLWSQSSGSTNFTTDSSQVQVLDFIWIKLWRHFV 182
>UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella
natans|Rep: Ribosomal protein L2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 153
Score = 77.8 bits (183), Expect = 3e-13
Identities = 34/77 (44%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Frame = +2
Query: 209 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKAT-SDWKGLKITVQLTVQNRQA 385
K+V ++ GG+V + S LA KIGP GLSPKK+G+D AK T +W G+ +T++LT+ + A
Sbjct: 7 KVVYIKSKGGQVASASVLAQKIGPYGLSPKKIGEDFAKKTKKNWDGIIVTIKLTIIKKNA 66
Query: 386 QIAVVPSAAALIIRALK 436
+ +VPS ++L+ R ++
Sbjct: 67 YLKIVPSVSSLLKREMQ 83
>UniRef50_UPI00015533B4 Cluster: PREDICTED: similar to ribosomal
protein L12; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L12 - Mus musculus
Length = 142
Score = 75.8 bits (178), Expect = 1e-12
Identities = 35/69 (50%), Positives = 50/69 (72%)
Frame = +3
Query: 453 VKSRKISNTTATSPLXDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDL 632
+K++K + + + + MR+RS+AR LSG++KEILGT+QSVGC V+G PHD+
Sbjct: 69 LKNQKSIKHSGSISFDEFVNTVWQMRHRSLARELSGTIKEILGTSQSVGCNVDGCHPHDI 128
Query: 633 IDDINSGAL 659
IDDINSGA+
Sbjct: 129 IDDINSGAV 137
>UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3;
Catarrhini|Rep: Kinesin family member C1 - Homo sapiens
(Human)
Length = 203
Score = 53.6 bits (123), Expect = 6e-06
Identities = 22/34 (64%), Positives = 22/34 (64%)
Frame = -1
Query: 341 PSSHLWPWQCHHPPF*ETDQEDRF*GPKMMWHRL 240
PSSH PWQCHH PF ETD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
jannaschii
Length = 161
Score = 47.2 bits (107), Expect = 5e-04
Identities = 22/53 (41%), Positives = 36/53 (67%)
Frame = +3
Query: 495 LXDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSG 653
L VI IAK+ ++ ++ L +VKE+LGT S+G TVEG+ P ++ +I++G
Sbjct: 100 LEQVIKIAKMKKDAMLSYTLKNAVKEVLGTCGSMGVTVEGKDPKEVQKEIDAG 152
Score = 46.4 bits (105), Expect = 0.001
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Frame = +2
Query: 209 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV--QNRQ 382
++V + GG A L P IGPLG++ +V +I + T D++G+++ V++ V + R+
Sbjct: 4 EVVEVLVTGGRATAGPPLGPAIGPLGVNVMQVVKEINEKTKDYEGMQVPVKVIVDTETRK 63
Query: 383 AQIAV-VPSAAALIIRAL 433
+I V +P ALI + L
Sbjct: 64 FEIEVGIPPTTALIKKEL 81
>UniRef50_P35025 Cluster: 50S ribosomal protein L11P; n=15;
Archaea|Rep: 50S ribosomal protein L11P - Sulfolobus
acidocaldarius
Length = 170
Score = 46.4 bits (105), Expect = 0.001
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = +3
Query: 495 LXDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSG 653
L + IA + + A+ L+ ++K +LGTA+S+G TVEG+ P D+I +I+ G
Sbjct: 100 LEQIADIAIKKKPQLSAKTLTAAIKSLLGTARSIGITVEGKDPKDVIKEIDQG 152
Score = 38.7 bits (86), Expect = 0.19
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Frame = +2
Query: 209 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLK--ITVQLTVQNRQ 382
K + + GG L P + LGL+ ++V I T+ +KG+ +T+++ ++
Sbjct: 4 KTIKIMVEGGSAKPGPPLGPTLSQLGLNVQEVVKKINDVTAQFKGMSVPVTIEIDSSTKK 63
Query: 383 AQIAV-VPSAAALIIRAL--KEPPRDRKKQK 466
I V VP+ +L+++A+ +EP D +K
Sbjct: 64 YDIKVGVPTTTSLLLKAINAQEPSGDPAHKK 94
>UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
maripaludis
Length = 159
Score = 43.6 bits (98), Expect = 0.007
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +2
Query: 209 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV--QNRQ 382
++V + GG+ A L P IGPLG++ +V I T D++G+ + V++ V R
Sbjct: 4 QVVEILVSGGKATAGPPLGPAIGPLGVNIMQVVQKINNMTKDYEGMSVPVKVIVDTDKRT 63
Query: 383 AQIAV-VPSAAALI 421
++ V +P A+ALI
Sbjct: 64 FEVEVGIPPASALI 77
Score = 38.7 bits (86), Expect = 0.19
Identities = 18/53 (33%), Positives = 32/53 (60%)
Frame = +3
Query: 495 LXDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSG 653
+ ++ IAK+ ++ +A L + KE++GT SVG +VEG P + I++G
Sbjct: 100 MEQIVKIAKMKQDAMLAYNLKNASKEVVGTCVSVGISVEGMTPSEAQKAIDAG 152
>UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L11P -
Thermoplasma volcanium
Length = 158
Score = 42.7 bits (96), Expect = 0.012
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Frame = +2
Query: 233 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV---QNRQAQIAV-V 400
GG+ + P +GPLGL+ +V +I + T +++G+++ V +TV + ++ +I V V
Sbjct: 11 GGKATTGPPIGPALGPLGLNVAQVVKEINEKTKEFQGMQVPVTVTVIDPETKKYEITVGV 70
Query: 401 PSAAALIIRALKEPPRDRKKQKNIKHNGNI 490
P +AL+ + L KK++ + N +
Sbjct: 71 PPTSALLKKELGLEKGASKKKEAVAGNATL 100
Score = 37.5 bits (83), Expect = 0.44
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = +3
Query: 459 SRKISNTTATSPLXDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLID 638
S+K + L + +A +A+ L +V E+LGT ++G VEG+ P ++
Sbjct: 88 SKKKEAVAGNATLEQIKNVAIKKMPSMLAKDLKSAVLEVLGTCVAMGINVEGKDPKEVQK 147
Query: 639 DINSGALTIDE 671
I SG + I++
Sbjct: 148 LIKSGQIKIEQ 158
>UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 719
Score = 39.5 bits (88), Expect = 0.11
Identities = 16/71 (22%), Positives = 37/71 (52%)
Frame = -2
Query: 541 IDLFLMIFAMPITSXKGDVAVVFDIFLLFTVTRRLLKGSDDKGCCRGNNSYLGLSVLNCQ 362
+++ I P+ ++++ + +F LF T + + +D C G S++ L +++
Sbjct: 271 VEVLGFILQRPVHKLVKELSLYYKLFTLFKTTPKSEEKTDTMDCINGIRSFMMLQIISHH 330
Query: 361 LHSDLETLPVT 329
+HS + T+P T
Sbjct: 331 VHSAIRTIPTT 341
>UniRef50_P62446 Cluster: 50S ribosomal protein L11P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L11P -
Nanoarchaeum equitans
Length = 160
Score = 37.9 bits (84), Expect = 0.33
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = +3
Query: 462 RKISNTTATSPLXDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDD 641
R + + DV+ IAK + L +VK +LGTA++ G VE + P ++ +
Sbjct: 89 RTVHEWVGNVSMKDVVEIAKKKIDSMPTSSLKAAVKSVLGTARATGIKVENKDPKEVTKE 148
Query: 642 INSG 653
++ G
Sbjct: 149 VDEG 152
>UniRef50_A3B9H4 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 260
Score = 37.5 bits (83), Expect = 0.44
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Frame = +2
Query: 215 VNLRCVGGEVGATSSLAPKIGPLGL-----SPKKVGDD-----IAKATSDWKGLKITVQL 364
V L C GGEVG+ S A + P + K VG+ +A W+ +
Sbjct: 98 VPLPCTGGEVGSKSEPAAAVAPAVIVDVKEEEKSVGNGGGGGGAQEAARWWRAGGADGGV 157
Query: 365 TVQNRQ-AQIAVVPSAAALIIRALKEPPRDRK 457
TVQ R+ A++AV P A A +RAL+ PPR K
Sbjct: 158 TVQPRERARVAVQP-ADARRLRALRAPPRQGK 188
>UniRef50_Q9VGN4 Cluster: CG31374-PB, isoform B; n=4;
Sophophora|Rep: CG31374-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 935
Score = 33.9 bits (74), Expect = 5.4
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +2
Query: 290 SPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKN 469
SP ++ DDI K D + K + L ++NR+AQ A I E R++ ++KN
Sbjct: 536 SPDEL-DDIDKIRDDLQSTKQMLALELRNREAQDRENKKLLAKIRTLETELEREKSREKN 594
Query: 470 IKHNGNI 490
+++ N+
Sbjct: 595 LEYGSNV 601
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 716,736,898
Number of Sequences: 1657284
Number of extensions: 13876507
Number of successful extensions: 35229
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 34166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35210
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77882636090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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