Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_D17
         (872 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82274-1|CAB05226.1|  165|Caenorhabditis elegans Hypothetical pr...   185   4e-47
Z82274-14|CAJ76933.1|   50|Caenorhabditis elegans Hypothetical p...    68   8e-12
U55369-1|AAK52175.1| 1247|Caenorhabditis elegans Cystic fibrosis...    29   5.7  
AF022976-4|AAC69083.2|  345|Caenorhabditis elegans Serpentine re...    28   7.6  

>Z82274-1|CAB05226.1|  165|Caenorhabditis elegans Hypothetical
           protein JC8.3a protein.
          Length = 165

 Score =  185 bits (450), Expect = 4e-47
 Identities = 82/106 (77%), Positives = 98/106 (92%)
 Frame = +2

Query: 179 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 358
           MPPKFDP EIKIV LRCVGGEVGATS+LAPK+GPLGLSPKK+G+DIAKAT DWKGLK+T 
Sbjct: 1   MPPKFDPTEIKIVYLRCVGGEVGATSALAPKVGPLGLSPKKIGEDIAKATQDWKGLKVTC 60

Query: 359 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISL 496
           +LT+QNR A+I VVPSAA+LI++ LKEPPRDRKK KN+KHNG++++
Sbjct: 61  KLTIQNRVAKIDVVPSAASLIVKELKEPPRDRKKVKNVKHNGDLTV 106



 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 37/70 (52%), Positives = 50/70 (71%), Gaps = 2/70 (2%)
 Frame = +3

Query: 462 RKISNTTATSPLX--DVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLI 635
           +K+ N      L    +I IA+IMR RSMA+ L G+VKEILGTAQSVGCT++G+ PHD+I
Sbjct: 93  KKVKNVKHNGDLTVDTIIKIARIMRPRSMAKKLEGTVKEILGTAQSVGCTIDGQHPHDII 152

Query: 636 DDINSGALTI 665
           + I +G + I
Sbjct: 153 ESIANGEIEI 162


>Z82274-14|CAJ76933.1|   50|Caenorhabditis elegans Hypothetical
           protein JC8.3c protein.
          Length = 50

 Score = 68.1 bits (159), Expect = 8e-12
 Identities = 30/47 (63%), Positives = 39/47 (82%)
 Frame = +3

Query: 525 MRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGALTI 665
           MR RSMA+ L G+VKEILGTAQSVGCT++G+ PHD+I+ I +G + I
Sbjct: 1   MRPRSMAKKLEGTVKEILGTAQSVGCTIDGQHPHDIIESIANGEIEI 47


>U55369-1|AAK52175.1| 1247|Caenorhabditis elegans Cystic fibrosis
            transmembrane conductanceregulator homolog protein 1
            protein.
          Length = 1247

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 21/80 (26%), Positives = 41/80 (51%)
 Frame = -2

Query: 574  ISFTEPERYRAIDLFLMIFAMPITSXKGDVAVVFDIFLLFTVTRRLLKGSDDKGCCRGNN 395
            +S  + E +  +D  L IF M + + +  + V+     +F+ T R    S+   CC+  +
Sbjct: 1061 MSSADKESHIVVD-DLDIFEMSVKTLRSRITVIPQKAKIFSDTLR----SNIDPCCQFAD 1115

Query: 394  SYLGLSVLNCQLHSDLETLP 335
            S + L++  CQL   +++LP
Sbjct: 1116 SDIWLAIEACQLREYVKSLP 1135


>AF022976-4|AAC69083.2|  345|Caenorhabditis elegans Serpentine
           receptor, class h protein37 protein.
          Length = 345

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -2

Query: 601 HPTDCAVPRISFTEPERYRAIDL 533
           HPT CAV    F +P +Y  IDL
Sbjct: 291 HPTACAVSLFLFYDPYQYYLIDL 313


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,397,345
Number of Sequences: 27780
Number of extensions: 330784
Number of successful extensions: 810
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)