Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_D16
(929 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 35 0.11
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 32 0.75
06_01_0486 - 3455030-3455770 31 1.3
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647 31 1.7
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 4.0
03_02_0342 - 7645323-7645909,7646323-7646491 29 4.0
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 5.3
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 5.3
08_02_1227 - 25398063-25398302,25398629-25398790,25399019-253991... 29 7.0
07_01_0479 + 3606663-3607448 29 7.0
03_01_0515 - 3864796-3865425 29 7.0
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 9.2
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 28 9.2
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 34.7 bits (76), Expect = 0.11
Identities = 23/70 (32%), Positives = 23/70 (32%)
Frame = +2
Query: 719 PPEKXFXTKXPPKGPXNPXXGXVXGGFSPKXPXPPXXXFPKNSPPXVXXGGKPXXGPXKX 898
PP K PPKGP P P P PP P PP G P P K
Sbjct: 330 PPPKAAPPPPPPKGPPPPPPAK-----GPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKG 384
Query: 899 XPGVXPPXXP 928
PP P
Sbjct: 385 GAS-RPPAAP 393
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +2
Query: 803 PKXPXPPXXXFPKNSPPXVXXGGKPXXGPXKXXPGVXPPXXP 928
P PP PK +PP G P P K P PP P
Sbjct: 321 PAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGP 362
Score = 30.3 bits (65), Expect = 2.3
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = +2
Query: 749 PPKGPXNPXXGXVXGGFSPKXPXPPXXXFPKNSPPXVXXGGKPXXGPXKXXPGVXPPXXP 928
PP P P PK PP PK PP G P P K P PP P
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPP--PKGPPPPPPAKGPPPPPPPKG-PSPPPPPPP 370
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 31.9 bits (69), Expect = 0.75
Identities = 21/76 (27%), Positives = 25/76 (32%), Gaps = 3/76 (3%)
Frame = +2
Query: 701 PXXRGXPPEKXFXTKXPPKGPXNPXXGXVXGGFSP---KXPXPPXXXFPKNSPPXVXXGG 871
P +G PP PP GP P G P + P PP + + PP G
Sbjct: 42 PPPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGV 101
Query: 872 KPXXGPXKXXPGVXPP 919
P P PP
Sbjct: 102 NSSQPPPPPPPPPSPP 117
>06_01_0486 - 3455030-3455770
Length = 246
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/72 (29%), Positives = 25/72 (34%)
Frame = +2
Query: 713 GXPPEKXFXTKXPPKGPXNPXXGXVXGGFSPKXPXPPXXXFPKNSPPXVXXGGKPXXGPX 892
G PPE K PP +P ++P P PP SPP P P
Sbjct: 55 GKPPEHHHHHKPPP----SPRCPSCHPPYTPPTPRPPPTPPYVPSPPPYVPPYIPPPTPP 110
Query: 893 KXXPGVXPPXXP 928
P + PP P
Sbjct: 111 YVPPYIPPPTPP 122
>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
Length = 252
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/70 (30%), Positives = 21/70 (30%)
Frame = +2
Query: 719 PPEKXFXTKXPPKGPXNPXXGXVXGGFSPKXPXPPXXXFPKNSPPXVXXGGKPXXGPXKX 898
P K PPK P G PK P P PK P KP K
Sbjct: 159 PGPKPKPKPSPPKPKPGPKPKPPKPGPKPKPPKPGPKPKPKPPKPGPKPKPKPPKPGPKP 218
Query: 899 XPGVXPPXXP 928
PG P P
Sbjct: 219 KPGPPQPWWP 228
Score = 28.7 bits (61), Expect = 7.0
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 3/79 (3%)
Frame = +2
Query: 701 PXXRGXPPEKXFXTKXPPKGPXNPXXGXVXGGFSPKXPXPPXXXFPKNSPPXVXXGGKPX 880
P + PP+ K P P P G PK P PK PP G KP
Sbjct: 163 PKPKPSPPKPKPGPKPKPPKP-GPKPKPPKPGPKPKPKPPKPGPKPKPKPPK--PGPKPK 219
Query: 881 XGPXK---XXPGVXPPXXP 928
GP + P PP P
Sbjct: 220 PGPPQPWWPIPFPKPPCPP 238
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.5 bits (63), Expect = 4.0
Identities = 21/72 (29%), Positives = 22/72 (30%)
Frame = +2
Query: 713 GXPPEKXFXTKXPPKGPXNPXXGXVXGGFSPKXPXPPXXXFPKNSPPXVXXGGKPXXGPX 892
G PP + P P GG P P P PP GG P P
Sbjct: 1120 GVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTP---PP 1176
Query: 893 KXXPGVXPPXXP 928
GV PP P
Sbjct: 1177 NAHGGVAPPPPP 1188
>03_02_0342 - 7645323-7645909,7646323-7646491
Length = 251
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = +2
Query: 797 FSPKXPXPPXXXFPKNSPPXVXXGGKPXXGPXKXXPGVXPPXXP 928
F+P P PP P+ PP P P P PP P
Sbjct: 171 FAPPPPPPPRPPAPEYKPPTPTLTPIPTPEPSYGPPAPKPPAPP 214
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.1 bits (62), Expect = 5.3
Identities = 19/69 (27%), Positives = 19/69 (27%)
Frame = +2
Query: 713 GXPPEKXFXTKXPPKGPXNPXXGXVXGGFSPKXPXPPXXXFPKNSPPXVXXGGKPXXGPX 892
G PP P P P G P P PP PP G P G
Sbjct: 319 GAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPR-PPGPGPGPPPPPGAA 377
Query: 893 KXXPGVXPP 919
G PP
Sbjct: 378 GRGGGGPPP 386
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 29.1 bits (62), Expect = 5.3
Identities = 19/62 (30%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Frame = +2
Query: 710 RGXPPEKXFXTKXPP--KGPXNPXXGXVXGGFSPKXPXPPXXXFPKNSPPXVXXGGKPXX 883
R PP F T P K +P V +P P PP P PP + KP
Sbjct: 316 RRTPPRTRFSTGSTPDTKQVTSPSPRPVQPSNAPPPPPPPPPPPPPPPPPKLNTAPKPPP 375
Query: 884 GP 889
P
Sbjct: 376 PP 377
>08_02_1227 -
25398063-25398302,25398629-25398790,25399019-25399150,
25399909-25399961,25400465-25400942
Length = 354
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +2
Query: 749 PPKGPXNPXXGXVXGGFSPKXPXPPXXXFPKNSPPXVXXGGKPXXGPXK 895
P P V G FSP P PP P V G+P K
Sbjct: 105 PTAAASTPVAQGVPGPFSPTQPKPPASFLSSGWPDGVKKRGRPKGSTNK 153
>07_01_0479 + 3606663-3607448
Length = 261
Score = 28.7 bits (61), Expect = 7.0
Identities = 22/67 (32%), Positives = 23/67 (34%)
Frame = +2
Query: 719 PPEKXFXTKXPPKGPXNPXXGXVXGGFSPKXPXPPXXXFPKNSPPXVXXGGKPXXGPXKX 898
PP F PP GP G + GG PP P PP G P P
Sbjct: 203 PPPGPFMRGPPPMGPPQVRPG-MPGG-------PPPGMRP-GMPPPPFRPGMPPPPPGPQ 253
Query: 899 XPGVXPP 919
PG PP
Sbjct: 254 QPGQNPP 260
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +2
Query: 719 PPEKXFXTKXPPKGPXNPXXGXVXGGFSPKXPXPPXXXFPKNSPP 853
PP T PP P P P P PP K+SPP
Sbjct: 73 PPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPP 117
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.3 bits (60), Expect = 9.2
Identities = 18/69 (26%), Positives = 21/69 (30%)
Frame = +2
Query: 722 PEKXFXTKXPPKGPXNPXXGXVXGGFSPKXPXPPXXXFPKNSPPXVXXGGKPXXGPXKXX 901
P+ + + PP P P SP P PP P S P P
Sbjct: 576 PQSNYASSQPPPPPPPPPLPNCLVP-SPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLP 634
Query: 902 PGVXPPXXP 928
P PP P
Sbjct: 635 PPPPPPPPP 643
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 28.3 bits (60), Expect = 9.2
Identities = 21/65 (32%), Positives = 24/65 (36%), Gaps = 5/65 (7%)
Frame = +2
Query: 749 PPKGPXNPXX-GXVXGGFSPKXPXPPXXXFPKNSPPXV--XXGGKPXXGP--XKXXPGVX 913
PP P P + GF P+ P PP P PP + G P P P V
Sbjct: 151 PPGMPRYPGPYPMMRPGFPPR-PMPPVGVMPLQRPPIIPGIRGAPPVVPPTARPPTPAVT 209
Query: 914 PPXXP 928
PP P
Sbjct: 210 PPDKP 214
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,275,597
Number of Sequences: 37544
Number of extensions: 249650
Number of successful extensions: 685
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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