Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_D15
         (940 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0138 + 17093196-17093325,17095704-17095804,17096224-170962...    81   1e-15
01_01_0078 + 587975-588179,588506-588606,589087-589167,589240-59...    79   5e-15
05_01_0142 - 940421-940701,941262-941574                               34   0.19 
04_01_0442 + 5770019-5771626,5773500-5773571,5774508-5774603,577...    32   0.57 
04_03_0867 - 20414999-20415160,20415255-20415384,20415515-204157...    31   1.7  
02_05_0970 - 33179180-33179210,33179297-33179441,33180307-331803...    31   1.7  
07_01_0853 + 6982185-6983593,6985926-6986497,6987139-6988439           30   3.1  
11_06_0418 - 23317077-23317343,23317614-23317787,23317886-233179...    29   4.0  
12_01_0282 - 2088302-2089081                                           29   5.3  
11_06_0497 + 24337772-24337993,24338042-24338083,24338176-24339357     29   5.3  
12_01_0383 - 3006974-3007200,3007808-3007985,3008398-3008478,300...    29   7.1  
03_05_1050 - 29966031-29966076,29966180-29966232,29966420-299668...    29   7.1  
01_07_0254 + 42318181-42319471,42319581-42319792,42319909-423201...    29   7.1  
11_05_0069 - 18814789-18815326,18815742-18816001,18816077-188166...    28   9.3  
11_03_0133 + 10536554-10536828,10537252-10537423                       28   9.3  
10_01_0351 + 3857296-3857324,3857888-3858116,3858207-3858368           28   9.3  
06_03_0794 - 24671955-24672362,24672469-24672505,24672804-246728...    28   9.3  

>06_03_0138 +
           17093196-17093325,17095704-17095804,17096224-17096292,
           17096403-17097650,17097763-17097871,17099459-17099655,
           17099732-17099842,17099927-17100079
          Length = 705

 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 39/70 (55%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
 Frame = +2

Query: 224 LGSKISLISKADIRYEGRLFTVDPQECTIALASVRSFGTEDRETQYPVAPQS-QVYDYIL 400
           +GS ISL SK++IRYEG L+T++ +E +I L +VRSFGTE R+      P S ++Y+YIL
Sbjct: 11  IGSVISLTSKSEIRYEGVLYTINTEESSIGLRNVRSFGTEGRKKDGQQIPASDKIYEYIL 70

Query: 401 FRGSDIKDIR 430
           FRGSDIKD++
Sbjct: 71  FRGSDIKDLQ 80



 Score = 28.3 bits (60), Expect = 9.3
 Identities = 17/54 (31%), Positives = 23/54 (42%)
 Frame = +3

Query: 441 NVPSMPNDPAIMQMSVPPTLGTGPAPGQYVGQFNHPVVGQTPYPQYHPMAGFPS 602
           ++PS  + P     +  P   T   PG + GQ    +    P PQY P A  PS
Sbjct: 144 SLPSWNSSPMPSSANGAPASTTTADPGSHNGQSG--IQMPPPLPQYQPGASLPS 195


>01_01_0078 +
           587975-588179,588506-588606,589087-589167,589240-590178,
           590388-590542,590837-590902,590963-591023,591659-591853,
           591939-592049,592116-592280
          Length = 692

 Score = 79.0 bits (186), Expect = 5e-15
 Identities = 39/70 (55%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
 Frame = +2

Query: 224 LGSKISLISKADIRYEGRLFTVDPQECTIALASVRSFGTEDRETQYPVAPQS-QVYDYIL 400
           +GS ISL SK++IRYEG L+ ++ +E +I L +VRSFGTE R+      P S +VY+YIL
Sbjct: 36  IGSLISLTSKSEIRYEGILYNINTEESSIGLRNVRSFGTEGRKKDGVQIPASTKVYEYIL 95

Query: 401 FRGSDIKDIR 430
           FRGSDIKD++
Sbjct: 96  FRGSDIKDLQ 105


>05_01_0142 - 940421-940701,941262-941574
          Length = 197

 Score = 33.9 bits (74), Expect = 0.19
 Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 10/83 (12%)
 Frame = +3

Query: 489 PPTLGTGPAPGQYVGQFNHPVVGQTP----YPQY--HPMAGFPSGVHNQLNKTSS----M 638
           PP     P PG Y  Q  +P  G  P    YPQ+  +P AG+P    +Q    SS    M
Sbjct: 56  PPPGAYPPPPGAYPPQHGYPQPGGYPPPGGYPQHGGYPPAGYPGSSGHQGGHGSSGGGHM 115

Query: 639 LDLIGGGSQQNASRSGTPAVGVH 707
             ++ GG+   A+  G   +  H
Sbjct: 116 GAMLAGGAAAAAAAYGAHKISSH 138


>04_01_0442 +
           5770019-5771626,5773500-5773571,5774508-5774603,
           5774739-5774885,5775429-5775560
          Length = 684

 Score = 32.3 bits (70), Expect = 0.57
 Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
 Frame = +3

Query: 531 GQFNHPVV-GQTPYPQYHP-MAGFPSGVHNQLNKTSSMLDLIGGGSQQNASRSGTPAVGV 704
           G F  P++ G + +P     +   P G  NQ N +S++   +  G+QQ A        G+
Sbjct: 384 GNFPEPLLLGSSLFPSDSAELLSMPGGRSNQQNSSSTIRTAVNIGAQQIA--------GL 435

Query: 705 HRKSPTADQ--SIQVXXXXXXXXXXXXQRGHTCXTRXDNXHSTTSH 836
           +   PT+    S+ +             RG +  ++    HS+TSH
Sbjct: 436 NASQPTSSSRGSVDIVRRSLQAASVPQSRGSSITSQQQRGHSSTSH 481


>04_03_0867 -
           20414999-20415160,20415255-20415384,20415515-20415702,
           20415967-20416001,20416363-20416579,20416737-20416820,
           20417609-20417875,20417954-20418061,20418163-20418249,
           20418629-20419399
          Length = 682

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
 Frame = +3

Query: 282 LLSILRNVLSP--WLACVHLARRIERLNIR*HLKAKYMTTFCSVVLTSRISGXLNN 443
           LLS++   + P  WL    L RR+ +++   H+    +T + + VL S ++   NN
Sbjct: 279 LLSVVAATVIPCMWLVIASLGRRLRQISKEAHISLAMLTVYLNDVLPSMLTVKANN 334


>02_05_0970 -
           33179180-33179210,33179297-33179441,33180307-33180362,
           33180650-33180691,33180814-33180866,33181059-33181490,
           33181630-33181707,33181785-33181870,33183588-33183689,
           33183754-33183960,33184976-33185336,33185463-33185626,
           33185709-33185817,33186468-33186485
          Length = 627

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 15/37 (40%), Positives = 26/37 (70%)
 Frame = +3

Query: 600 SGVHNQLNKTSSMLDLIGGGSQQNASRSGTPAVGVHR 710
           SG+HN ++ + +M ++ G  SQ+NA+ SG P+ GV +
Sbjct: 42  SGLHN-MHGSLNMPNMPGSFSQRNAAMSGLPSSGVQQ 77


>07_01_0853 + 6982185-6983593,6985926-6986497,6987139-6988439
          Length = 1093

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 17/57 (29%), Positives = 30/57 (52%)
 Frame = +2

Query: 218 PELGSKISLISKADIRYEGRLFTVDPQECTIALASVRSFGTEDRETQYPVAPQSQVY 388
           P   S  SL++  D +   R+F  D ++ + AL ++ +   E R  +YPVA   +V+
Sbjct: 96  PSFRSDGSLLAVGDKKGVVRVFRADKKQSSGALRTLTAHTAETRVVRYPVAGGDKVH 152


>11_06_0418 -
           23317077-23317343,23317614-23317787,23317886-23317971,
           23318125-23318244,23318338-23318368,23318457-23318532,
           23318672-23318759,23318877-23318938,23319041-23319117,
           23319890-23319992,23320237-23320298,23321116-23321289,
           23322160-23322405
          Length = 521

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = +3

Query: 492 PTLGTGPAPGQYVGQFNHPVVGQTPYP 572
           PTL T  APG Y    N   +   PYP
Sbjct: 32  PTLSTPHAPGPYTSSTNAEAIATQPYP 58


>12_01_0282 - 2088302-2089081
          Length = 259

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -2

Query: 135 PPNKSEQTTK*LTGSWQQAQRLQTASVAESKS*GIPYS 22
           PP ++  T   L G+W+QA+ +  AS+    S  +P S
Sbjct: 121 PPARANPTLLLLDGTWKQAKEMHAASLPFLSSFAVPVS 158


>11_06_0497 + 24337772-24337993,24338042-24338083,24338176-24339357
          Length = 481

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 20/78 (25%), Positives = 32/78 (41%)
 Frame = +3

Query: 474 MQMSVPPTLGTGPAPGQYVGQFNHPVVGQTPYPQYHPMAGFPSGVHNQLNKTSSMLDLIG 653
           ++ +VP  L  GP+    VG FN+ V     +   +     PS V     +  +   L+ 
Sbjct: 192 VKRAVPKELSPGPSMRSPVGGFNYAVNRANNFLNGYTQGYNPSPVGGYGMRMDARFGLLS 251

Query: 654 GGSQQNASRSGTPAVGVH 707
           GG     S  G   VG++
Sbjct: 252 GGRSSYPSFGGGYGVGMN 269


>12_01_0383 -
           3006974-3007200,3007808-3007985,3008398-3008478,
           3008583-3008822
          Length = 241

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
 Frame = +3

Query: 489 PPTLGTGPAPGQYVGQFNH-PVVGQTPYPQYHPMAGFPSGVHNQLNKTSSMLDLIGGGSQ 665
           PPT    PA   Y  Q +  PV GQ     Y   AG+P   ++   +      L+ GG+ 
Sbjct: 62  PPTAAASPA--SYHNQLHRVPVCGQV-LVAYGGAAGWPFTPYSSPAQWQVAAGLVNGGAV 118

Query: 666 QNASRSGTP 692
            +  R G+P
Sbjct: 119 DHRRRLGSP 127


>03_05_1050 -
           29966031-29966076,29966180-29966232,29966420-29966845,
           29966983-29967060,29967135-29967220,29969054-29969155,
           29969221-29969427,29970528-29970885,29971011-29971174,
           29971258-29971366,29971595-29971600
          Length = 544

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 15/43 (34%), Positives = 27/43 (62%)
 Frame = +3

Query: 582 PMAGFPSGVHNQLNKTSSMLDLIGGGSQQNASRSGTPAVGVHR 710
           P A   SG+HN ++   ++ ++ G  +Q+NA+ SG P+ GV +
Sbjct: 32  PGAFHHSGLHN-IHANFNLPNMPGSLAQRNAAMSGLPSSGVQQ 73


>01_07_0254 +
           42318181-42319471,42319581-42319792,42319909-42320132,
           42320232-42321009
          Length = 834

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = +2

Query: 554 WTNSISSVSS--NGWLSKWSSQPAQQDE 631
           W +S  S +   NGWL KW ++P  Q+E
Sbjct: 635 WISSQRSYAEALNGWLRKWLTEPEVQEE 662


>11_05_0069 -
           18814789-18815326,18815742-18816001,18816077-18816631,
           18816907-18817062
          Length = 502

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = -1

Query: 532 PTYCPGAGPVPRVGGTDICIMAGSLGI-EGTLFSXPDILDVRTTEQNVVIYLAL 374
           P   P  GPVPRV     C+ AG   +  G L   PD   +  T   ++  LAL
Sbjct: 29  PNPNPNPGPVPRVRRRGPCMHAGERFLCGGRLIFGPDASSIVLTVSLIMTPLAL 82


>11_03_0133 + 10536554-10536828,10537252-10537423
          Length = 148

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 651 GGGSQQNASRSGTPAVGVHRKSPTADQSI 737
           G G  +  +  GTP +G+HR+    D  I
Sbjct: 93  GHGMARQTAGGGTPTIGIHRRLQVGDDGI 121


>10_01_0351 + 3857296-3857324,3857888-3858116,3858207-3858368
          Length = 139

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 23/62 (37%), Positives = 29/62 (46%)
 Frame = +2

Query: 203 MSSGMPELGSKISLISKADIRYEGRLFTVDPQECTIALASVRSFGTEDRETQYPVAPQSQ 382
           M +GMP L   I + S   I + G   T D + CTI L +  S    D    +PVA Q  
Sbjct: 1   MPTGMPSLLRNI-MQSLVSIDFHGS-HTRD-RFCTICLRAFSSERCLDHSMHHPVAEQPN 57

Query: 383 VY 388
           VY
Sbjct: 58  VY 59


>06_03_0794 -
           24671955-24672362,24672469-24672505,24672804-24672858,
           24674044-24674167,24674670-24674903
          Length = 285

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
 Frame = +3

Query: 507 GPAPGQYVGQFNHPVVGQTPY-PQYHPMAGFPSGVHNQLN 623
           GPA   Y GQF  PV G  PY P Y P    P    N  N
Sbjct: 172 GPAVYPY-GQFGQPVPGDQPYSPGYVPGHILPLSNQNAAN 210


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,616,305
Number of Sequences: 37544
Number of extensions: 563765
Number of successful extensions: 1468
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1464
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2694390200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)