Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_D15
(940 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g26110.1 68414.m03186 expressed protein 81 8e-16
At5g45330.1 68418.m05564 expressed protein ; expression supporte... 80 2e-15
At4g19360.1 68417.m02851 expressed protein 59 4e-09
At4g19340.1 68417.m02849 hypothetical protein 41 0.001
At4g19260.1 68417.m02840 kelch repeat-containing protein contain... 40 0.002
At4g34150.1 68417.m04846 C2 domain-containing protein similar to... 36 0.029
At4g19200.1 68417.m02833 proline-rich family protein contains pr... 33 0.27
At3g25950.1 68416.m03234 hypothetical protein 31 0.83
At5g26910.1 68418.m03209 expressed protein 31 1.5
At1g70320.1 68414.m08090 ubiquitin-protein ligase 2 (UPL2) nearl... 31 1.5
At1g55860.1 68414.m06406 ubiquitin-protein ligase 1 (UPL1) nearl... 30 1.9
At2g25930.1 68415.m03112 hydroxyproline-rich glycoprotein family... 30 2.5
At1g25510.1 68414.m03168 aspartyl protease family protein contai... 29 3.4
At3g19840.1 68416.m02513 FF domain-containing protein / WW domai... 29 4.4
At1g70620.2 68414.m08137 cyclin-related contains weak similarity... 29 4.4
At1g70620.1 68414.m08138 cyclin-related contains weak similarity... 29 4.4
At1g31750.1 68414.m03895 proline-rich family protein contains pr... 29 4.4
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 29 5.9
At4g05150.1 68417.m00773 octicosapeptide/Phox/Bem1p (PB1) domain... 29 5.9
At2g21960.1 68415.m02609 expressed protein 29 5.9
At5g12210.2 68418.m01433 geranylgeranyl transferase type II beta... 28 7.8
At5g12210.1 68418.m01432 geranylgeranyl transferase type II beta... 28 7.8
>At1g26110.1 68414.m03186 expressed protein
Length = 611
Score = 81.4 bits (192), Expect = 8e-16
Identities = 39/70 (55%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Frame = +2
Query: 224 LGSKISLISKADIRYEGRLFTVDPQECTIALASVRSFGTEDRETQYP-VAPQSQVYDYIL 400
+GS ISL SK++IRYEG L+ ++ E +I L +VRSFGTE R+ P V P +VY+YIL
Sbjct: 18 VGSLISLTSKSEIRYEGILYNINTDESSIGLQNVRSFGTEGRKKDGPQVPPSDKVYEYIL 77
Query: 401 FRGSDIKDIR 430
FRG+DIKD++
Sbjct: 78 FRGTDIKDLQ 87
>At5g45330.1 68418.m05564 expressed protein ; expression supported
by MPSS
Length = 571
Score = 79.8 bits (188), Expect = 2e-15
Identities = 40/70 (57%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Frame = +2
Query: 224 LGSKISLISKADIRYEGRLFTVDPQECTIALASVRSFGTEDRETQYP-VAPQSQVYDYIL 400
+GS ISLISK +IRYEG L+ ++ Q+ T+ L +VRS GTE R+ P + P +VYDYIL
Sbjct: 34 IGSFISLISKYEIRYEGILYHLNVQDSTLGLKNVRSCGTEGRKKDGPQIPPCDKVYDYIL 93
Query: 401 FRGSDIKDIR 430
FRGSDIKD++
Sbjct: 94 FRGSDIKDLQ 103
>At4g19360.1 68417.m02851 expressed protein
Length = 268
Score = 59.3 bits (137), Expect = 4e-09
Identities = 29/69 (42%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Frame = +2
Query: 224 LGSKISLISKADIRYEGRLFTVDPQECTIALASVRSFGTEDR-ETQYPVAPQSQVYDYIL 400
+GS ++LI+ DIRYEG L ++ QE T+ L +V +GTE R + + P +++ +YIL
Sbjct: 28 IGSFVTLIANFDIRYEGILCFLNLQESTLGLQNVVCYGTEGRNQNGVQIPPDTKIQNYIL 87
Query: 401 FRGSDIKDI 427
F G++IK+I
Sbjct: 88 FNGNNIKEI 96
>At4g19340.1 68417.m02849 hypothetical protein
Length = 232
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Frame = +2
Query: 224 LGSKISLISKADIRYEGRLFTVDPQECTIALAS-VRSFG--TEDRETQYPVAPQSQVYDY 394
+G ++++S DIRYEG + ++ Q+ + L + VR +G E+ Q +V+ +
Sbjct: 20 IGKFVAVLSNNDIRYEGVISLLNLQDSKLGLQNVVRVYGREVENDNEQRVFQVLKEVHSH 79
Query: 395 ILFRGSDIK 421
++FRGSDIK
Sbjct: 80 MVFRGSDIK 88
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 224 LGSKISLISKADIRYEGRLFTVDPQECTIALASVRSFGTEDR-ETQYPVAPQSQVYDYIL 400
+G SLI+ D+R EG + V + I + + +GTE R + + + +Q+ I
Sbjct: 129 IGHVGSLITTEDVRIEGVISHVKFHDSMIFMKNCMCYGTEGRTKRRRSIVACNQLAGSIH 188
Query: 401 FRGSDIK 421
F+ DIK
Sbjct: 189 FKFRDIK 195
>At4g19260.1 68417.m02840 kelch repeat-containing protein contains
Pfam profile PF01344: Kelch motif
Length = 288
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Frame = +2
Query: 224 LGSKISLISKADIRYEGRLFTVDPQECTIALAS-VRSFG--TEDRETQYPVAPQSQVYDY 394
+G ++++S DIRYEG + ++ Q+ + L + VR +G E+ Q +V+ +
Sbjct: 20 IGKFVAVMSNNDIRYEGVISLLNLQDSKLGLQNVVRVYGREVENDNEQRVFQVLKEVHSH 79
Query: 395 ILFRGSDIK 421
++FRGSDIK
Sbjct: 80 MVFRGSDIK 88
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 224 LGSKISLISKADIRYEGRLFTVDPQECTIALASVRSFGTEDR-ETQYPVAPQSQVYDYIL 400
+G SLI+ D+R EG + V + I + + +GTE R + + + +Q+ I
Sbjct: 129 IGHVGSLITTEDVRIEGVISHVKFHDSMIFMKNCMCYGTEGRTKRRRSIVACNQLAGSIH 188
Query: 401 FRGSDIK 421
F+ DIK
Sbjct: 189 FKFRDIK 195
>At4g34150.1 68417.m04846 C2 domain-containing protein similar to
calcium-dependent protein kinase [Dunaliella
tertiolecta] GI:6644464; contains Pfam profile PF00168:
C2 domain
Length = 247
Score = 36.3 bits (80), Expect = 0.029
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 441 NVPSMPNDPAIMQMSVPPTLGTGPAPGQYVGQFNHPVVGQTPYPQ-YHPMAGFP 599
+ PS P P + Q S PP+ Y G +P V Q P P Y P +G+P
Sbjct: 138 SAPSAPYAPHVPQYSAPPSASPYSTAPPYSGPSLYPQVQQYPQPSGYPPASGYP 191
>At4g19200.1 68417.m02833 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 179
Score = 33.1 bits (72), Expect = 0.27
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +3
Query: 477 QMSVPPTLGTGPAPGQYVGQFNHPVVGQTPYPQYHPMAGFPS-GVHNQLNKTSSMLDLIG 653
Q PP G PA G G + G P P +P AG+P+ G H+ + + +I
Sbjct: 40 QQGYPPAGGYPPA-GYPPGAYPAAPGGYPPAPGGYPPAGYPAPGAHHSGHSGGGLGGMIA 98
Query: 654 GGSQQNASRSGTPAVGVHRKSP 719
G + A+ G VG +P
Sbjct: 99 GAAGAAAAAYGAHHVGHASHNP 120
>At3g25950.1 68416.m03234 hypothetical protein
Length = 251
Score = 31.5 bits (68), Expect = 0.83
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 66 FVNAALVANFPSVILLFVLIYSVDSFSVFEIVENLCHRNRS 188
F ++ +A FPS +LLF+ +Y++ F VF + H S
Sbjct: 6 FNPSSFLATFPSFLLLFLAVYTIGYFLVFRTWKQSSHLGAS 46
>At5g26910.1 68418.m03209 expressed protein
Length = 900
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/27 (55%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +1
Query: 328 FIWHGGSRDSI-SGSTSKPSI*LHSVP 405
F WHG SR + SGSTS+ S+ ++SVP
Sbjct: 17 FDWHGKSRKKLFSGSTSELSVLVNSVP 43
>At1g70320.1 68414.m08090 ubiquitin-protein ligase 2 (UPL2) nearly
identical to ubiquitin-protein ligase 2 [Arabidopsis
thaliana] GI:7108523; E3, HECT-domain protein family;
similar to ubiquitin-protein ligase 2 GI:7108523 from
[Arabidopsis thaliana]
Length = 3658
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 634 QCLTSLVEDPNKMHLGQVHLLSVFIGKVQQLTKAFRLVQALAAQVTRD-SNADTPAXHD 807
QCLTS++ + H L+++ + ++ LT+A + L ++V + N D+ HD
Sbjct: 1967 QCLTSILNVIDLDHPDAPKLVTLILKSLETLTRAANAAEQLKSEVPNEQKNTDSDERHD 2025
>At1g55860.1 68414.m06406 ubiquitin-protein ligase 1 (UPL1) nearly
identical to ubiquitin-protein ligase 1 [Arabidopsis
thaliana] GI:7108521; E3, HECT-domain protein family;
similar to GI:7108521, GB:AAF36454 from [Arabidopsis
thaliana]
Length = 3891
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 634 QCLTSLVEDPNKMHLGQVHLLSVFIGKVQQLTKAFRLVQALAAQVTRD-SNADTPAXHD 807
QCLTS++ + H L+++ + ++ LT+A + L ++V + N D+ HD
Sbjct: 2187 QCLTSILHVIDLDHPDAPKLVTLILKSLETLTRAANAAEQLKSEVPNEKKNRDSDERHD 2245
>At2g25930.1 68415.m03112 hydroxyproline-rich glycoprotein family
protein identical to cDNA nematode responsive protein
GI:2213418
Length = 695
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 519 GQYVGQFNHPVVGQTPYPQYHPMAGFP 599
G Y G + H + PQYHP GFP
Sbjct: 494 GHYGGYYGHYMPTPMVMPQYHPGMGFP 520
>At1g25510.1 68414.m03168 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 483
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 203 MSSGMPELGSKISLISKADIRYEGRLFTVDPQECTIALASVRSFGTEDRETQYPVA-PQS 379
+ S + L I+ ISKAD++ ++T + Q+ L S + G+ + T+ + P
Sbjct: 100 VKSLITRLDLAINNISKADLKPISTMYTTEEQDIEAPLISGTTQGSGEYFTRVGIGKPAR 159
Query: 380 QVYDYILFRGSDI 418
+VY +L GSD+
Sbjct: 160 EVY-MVLDTGSDV 171
>At3g19840.1 68416.m02513 FF domain-containing protein / WW
domain-containing protein weak similarity to
transcription factor CA150b [Mus musculus] GI:6329166;
contains Pfam profiles PF01846: FF domain, PF00397: WW
domain
Length = 743
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +3
Query: 447 PSMPNDPAIMQMSVPPTLGTGPAPGQYVGQFN-HPVVGQTPYPQYHPMAGFPSGV 608
P + P S P T P PG G +P + YP YH + G P G+
Sbjct: 16 PGLMTSPPAFPGSNP--FSTTPRPGMSAGPAQMNPGIHPHMYPPYHSLPGTPQGM 68
>At1g70620.2 68414.m08137 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 884
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/50 (38%), Positives = 22/50 (44%)
Frame = +3
Query: 486 VPPTLGTGPAPGQYVGQFNHPVVGQTPYPQYHPMAGFPSGVHNQLNKTSS 635
VPP G P Y QF+HP +P P P G PS + Q SS
Sbjct: 36 VPPPTQPGGPPAWYSNQFHHP-HSPSPPPPPPPQWGPPSPHYPQGQPYSS 84
>At1g70620.1 68414.m08138 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 897
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/50 (38%), Positives = 22/50 (44%)
Frame = +3
Query: 486 VPPTLGTGPAPGQYVGQFNHPVVGQTPYPQYHPMAGFPSGVHNQLNKTSS 635
VPP G P Y QF+HP +P P P G PS + Q SS
Sbjct: 36 VPPPTQPGGPPAWYSNQFHHP-HSPSPPPPPPPQWGPPSPHYPQGQPYSS 84
>At1g31750.1 68414.m03895 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 176
Score = 29.1 bits (62), Expect = 4.4
Identities = 22/79 (27%), Positives = 29/79 (36%), Gaps = 6/79 (7%)
Frame = +3
Query: 489 PPTLGTGPAPGQYVGQ------FNHPVVGQTPYPQYHPMAGFPSGVHNQLNKTSSMLDLI 650
PP G P PG Y Q +P P P +P AG+P + + LI
Sbjct: 31 PPPQGAYPPPGGYPPQGYPPPPHGYPPAAYPPPPGAYPPAGYPGPSGPRPGFGGGVGGLI 90
Query: 651 GGGSQQNASRSGTPAVGVH 707
G + A+ G G H
Sbjct: 91 AGAATAAAAAMGGHHAGHH 109
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 447 PSMPNDPAIMQM-SVPPTLGTGPAPGQYVGQFNHPVVGQTPYPQYHP 584
PS+P+ P + S PPTL + P P ++ P P P Y P
Sbjct: 405 PSLPSPPPPAPIFSTPPTLTSPPPPSPPPPVYSPPPPPPPPPPVYSP 451
>At4g05150.1 68417.m00773 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein various predicted proteins
contains Pfam profile PF00564: PB1 domain
Length = 477
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 516 PGQYVGQFNHPVVGQTPYPQYHPMAG 593
PGQY+ Q++H +G PQ H MAG
Sbjct: 388 PGQYLQQYHHVPMGY-HQPQTHQMAG 412
>At2g21960.1 68415.m02609 expressed protein
Length = 332
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 488 TPNSGYWTSSWAVCGAV*PSSCWTNSISSVSSNGWLSKWSSQP 616
T +SG+ SS S+ ++ +S GW KWSSQP
Sbjct: 46 TASSGFDLSSLESAINKKDSNGVKEALDKLSEEGWAKKWSSQP 88
>At5g12210.2 68418.m01433 geranylgeranyl transferase type II beta
subunit, putative / RAB geranylgeranyltransferase beta
subunit, putative similar to rab geranylgeranyl
transferase GB:CAA69383 GI:1552549 from [Homo sapiens]
Length = 320
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Frame = +1
Query: 502 VLDQLL--GSMWGSLTIQLLDKLHILS---IIQWL 591
V+D L G+ WG T+ LLDKL +S +I WL
Sbjct: 34 VMDHLRMNGAYWGLTTLDLLDKLGCVSEEEVISWL 68
>At5g12210.1 68418.m01432 geranylgeranyl transferase type II beta
subunit, putative / RAB geranylgeranyltransferase beta
subunit, putative similar to rab geranylgeranyl
transferase GB:CAA69383 GI:1552549 from [Homo sapiens]
Length = 321
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Frame = +1
Query: 502 VLDQLL--GSMWGSLTIQLLDKLHILS---IIQWL 591
V+D L G+ WG T+ LLDKL +S +I WL
Sbjct: 35 VMDHLRMNGAYWGLTTLDLLDKLGCVSEEEVISWL 69
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,434,849
Number of Sequences: 28952
Number of extensions: 437864
Number of successful extensions: 1176
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1169
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2246578488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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