Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_D14
         (864 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF441759-1|AAM20923.1| 1276|Drosophila melanogaster ER-golgi esc...    37   0.031
AE013599-134|AAF57291.3| 1276|Drosophila melanogaster CG33131-PA...    37   0.031
S82273-1|AAB47135.2|  194|Drosophila melanogaster Fex protein.         31   2.0  

>AF441759-1|AAM20923.1| 1276|Drosophila melanogaster ER-golgi escort
           protein protein.
          Length = 1276

 Score = 37.1 bits (82), Expect = 0.031
 Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
 Frame = -2

Query: 800 WALIIIYLSKKCILTVGRC-ILPVIYKLCIS*VFGLFSSSNSNVVLFTTIVQINKKKLQ 627
           W +    L++  ILT+G    +PVI + CI  + GL S     ++LF+TI+ +N K+ +
Sbjct: 472 WHISKTLLTEITILTIGLATFVPVIQEFCIFAIVGLLSDFMLQMLLFSTILAMNIKRTE 530


>AE013599-134|AAF57291.3| 1276|Drosophila melanogaster CG33131-PA
           protein.
          Length = 1276

 Score = 37.1 bits (82), Expect = 0.031
 Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
 Frame = -2

Query: 800 WALIIIYLSKKCILTVGRC-ILPVIYKLCIS*VFGLFSSSNSNVVLFTTIVQINKKKLQ 627
           W +    L++  ILT+G    +PVI + CI  + GL S     ++LF+TI+ +N K+ +
Sbjct: 472 WHISKTLLTEITILTIGLATFVPVIQEFCIFAIVGLLSDFMLQMLLFSTILAMNIKRTE 530


>S82273-1|AAB47135.2|  194|Drosophila melanogaster Fex protein.
          Length = 194

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
 Frame = -2

Query: 641 KKKLQISNSIAAMKPKNTHDTTT----IAAANTSKY 546
           K+KL   NS    KPKNT D +T    +A ANT+++
Sbjct: 144 KRKLSPENSDLGNKPKNTRDNSTLIKNVAPANTNRF 179


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,064,485
Number of Sequences: 53049
Number of extensions: 626336
Number of successful extensions: 1415
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1415
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4168047156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)