Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_D13
         (911 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    25   1.1  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    24   1.9  
AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    23   3.3  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    23   3.3  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    23   3.3  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    22   7.6  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -2

Query: 298 RPIEIKTHSPYSSILDSARVAWKFLQ 221
           +P+ IK  +  SSI+D  ++++ F Q
Sbjct: 80  KPVHIKLTNRESSIIDKTKISFNFSQ 105


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 118 FISNNISVFIL*IGDISFFFKC 53
           FI +N+ +FIL +G +S  F C
Sbjct: 151 FIFDNVWLFILWVGILSTIFLC 172


>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 545 CIVWPPSRWQSLQAKLPENR 604
           C + P S +QSLQ +L EN+
Sbjct: 65  CYLRPASGFQSLQFRLLENK 84


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 545 CIVWPPSRWQSLQAKLPENR 604
           C + P S +QSLQ +L EN+
Sbjct: 125 CYLRPASGFQSLQFRLLENK 144


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 545 CIVWPPSRWQSLQAKLPENR 604
           C + P S +QSLQ +L EN+
Sbjct: 125 CYLRPASGFQSLQFRLLENK 144


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 202 VGYVARVEGISMQPVLNPESMN 267
           VG  A    I M  ++NP+S+N
Sbjct: 248 VGLPAPTSSIMMHHLVNPQSLN 269


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,736
Number of Sequences: 336
Number of extensions: 4552
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25444518
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)