Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_D13
         (911 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal pe...    40   1e-04

>CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal
           peptidase protein.
          Length = 247

 Score = 39.9 bits (89), Expect = 1e-04
 Identities = 18/61 (29%), Positives = 31/61 (50%)
 Frame = +1

Query: 229 ISMQPVLNPESMNTDYVFLSRWAVRDYHVKRGDVISLMSPKDPNQKIIKRVVALQGDVVS 408
           + + P + P  M  + +   R   R   ++RGD+I   SP  P Q + KR++ + GD + 
Sbjct: 34  VCVGPSMEPTLMTNNVLITDRITPRLAKLQRGDIIITKSPTKPVQHVCKRIIGMPGDRIM 93

Query: 409 T 411
           T
Sbjct: 94  T 94



 Score = 37.9 bits (84), Expect = 4e-04
 Identities = 15/29 (51%), Positives = 21/29 (72%)
 Frame = +2

Query: 488 SXSNTFGPVSLGLVNARAVCIVWPPSRWQ 574
           S S  +GPV +GLV +RAVC +WP S ++
Sbjct: 216 SDSRNYGPVPIGLVKSRAVCRLWPLSEFK 244



 Score = 27.1 bits (57), Expect = 0.79
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 421 KNQYVKIPEGHCWVEGDH 474
           +   V +P GH W+EGD+
Sbjct: 194 RTSIVIVPRGHLWIEGDN 211


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 860,057
Number of Sequences: 2352
Number of extensions: 19133
Number of successful extensions: 31
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98814789
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)