Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_D13
         (911 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF359563-1|AAK52905.1|  175|Homo sapiens inner mitochondrial mem...   160   7e-39
BC008497-1|AAH08497.1|  110|Homo sapiens IMMP2L protein protein.      112   1e-24
AC005166-1|AAS02043.1|   80|Homo sapiens unknown protein.              77   7e-14
BC023595-1|AAH23595.1|  166|Homo sapiens IMMP1L protein protein.       67   1e-10
AL133295-1|CAC39221.1|  144|Homo sapiens dJ1137O17.1 (similar to...    67   1e-10
AK057788-1|BAB71573.1|  166|Homo sapiens protein ( Homo sapiens ...    67   1e-10
AC005161-1|AAS07432.1|   34|Homo sapiens unknown protein.              52   3e-06
AC073326-1|AAS07528.1|   39|Homo sapiens unknown protein.              48   5e-05
AC006392-2|AAS07496.1|   21|Homo sapiens unknown protein.              40   0.017
AC006392-1|AAS07497.1|   30|Homo sapiens unknown protein.              40   0.017

>AF359563-1|AAK52905.1|  175|Homo sapiens inner mitochondrial
           membrane peptidase 2 protein.
          Length = 175

 Score =  160 bits (388), Expect = 7e-39
 Identities = 70/123 (56%), Positives = 93/123 (75%), Gaps = 1/123 (0%)
 Frame = +1

Query: 121 GGLLMWLKSVCKSLVFGLPIGVTILDTVGYVARVEGISMQPVLNPE-SMNTDYVFLSRWA 297
           G +  ++K+ CK     +P+ VT LD V  VARVEG SMQP LNP  S ++D V L+ W 
Sbjct: 6   GWVKRYIKAFCKGFFVAVPVAVTFLDRVACVARVEGASMQPSLNPGGSQSSDVVLLNHWK 65

Query: 298 VRDYHVKRGDVISLMSPKDPNQKIIKRVVALQGDVVSTLGYKNQYVKIPEGHCWVEGDHT 477
           VR++ V RGD++SL+SPK+P QKIIKRV+AL+GD+V T+G+KN+YVK+P GH WVEGDH 
Sbjct: 66  VRNFEVHRGDIVSLVSPKNPEQKIIKRVIALEGDIVRTIGHKNRYVKVPRGHIWVEGDHH 125

Query: 478 GHT 486
           GH+
Sbjct: 126 GHS 128



 Score = 60.1 bits (139), Expect = 1e-08
 Identities = 25/40 (62%), Positives = 31/40 (77%)
 Frame = +2

Query: 494 SNTFGPVSLGLVNARAVCIVWPPSRWQSLQAKLPENRQPV 613
           SN+FGPVSLGL++A A  I+WPP RWQ L++ LP  R PV
Sbjct: 131 SNSFGPVSLGLLHAHATHILWPPERWQKLESVLPPERLPV 170


>BC008497-1|AAH08497.1|  110|Homo sapiens IMMP2L protein protein.
          Length = 110

 Score =  112 bits (270), Expect = 1e-24
 Identities = 52/96 (54%), Positives = 70/96 (72%), Gaps = 1/96 (1%)
 Frame = +1

Query: 121 GGLLMWLKSVCKSLVFGLPIGVTILDTVGYVARVEGISMQPVLNPE-SMNTDYVFLSRWA 297
           G +  ++K+ CK     +P+ VT LD V  VARVEG SMQP LNP  S ++D V L+ W 
Sbjct: 6   GWVKRYIKAFCKGFFVAVPVAVTFLDRVACVARVEGASMQPSLNPGGSQSSDVVLLNHWK 65

Query: 298 VRDYHVKRGDVISLMSPKDPNQKIIKRVVALQGDVV 405
           VR++ V RGD++SL+SPK+P QKIIKRV+AL+GD+V
Sbjct: 66  VRNFEVHRGDIVSLVSPKNPEQKIIKRVIALEGDIV 101


>AC005166-1|AAS02043.1|   80|Homo sapiens unknown protein.
          Length = 80

 Score = 77.4 bits (182), Expect = 7e-14
 Identities = 36/75 (48%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
 Frame = +1

Query: 121 GGLLMWLKSVCKSLVFGLPIGVTILDTVGYVARVEGISMQPVLNP-ESMNTDYVFLSRWA 297
           G +  ++K+ CK     +P+ VT LD V  VARVEG SMQP LNP  S ++D V L+ W 
Sbjct: 6   GWVKRYIKAFCKGFFVAVPVAVTFLDRVACVARVEGASMQPSLNPGGSQSSDVVLLNHWK 65

Query: 298 VRDYHVKRGDVISLM 342
           VR++ V RGD++SL+
Sbjct: 66  VRNFEVHRGDIVSLV 80


>BC023595-1|AAH23595.1|  166|Homo sapiens IMMP1L protein protein.
          Length = 166

 Score = 66.9 bits (156), Expect = 1e-10
 Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
 Frame = +1

Query: 202 VGYVARVEGISMQPVLNPESMNTDYVFLSRWAVRDYHVKRGDVISLMSPKDPNQKIIKRV 381
           VG V    G SM+P +     N+D VF    +   Y ++RGD++   SP DP   I KRV
Sbjct: 30  VGGVVMCSGPSMEPTIQ----NSDIVFAENLSRHFYGIQRGDIVIAKSPSDPKSNICKRV 85

Query: 382 VALQGDVVSTLG---YKNQYVKIPEGHCWVEGDH 474
           + L+GD + T     +   +  +P GH W+EGD+
Sbjct: 86  IGLEGDKILTTSPSDFFKSHSYVPMGHVWLEGDN 119


>AL133295-1|CAC39221.1|  144|Homo sapiens dJ1137O17.1 (similar to
           putative mitochondrial inner membrane protease subnunit
           protein.
          Length = 144

 Score = 66.9 bits (156), Expect = 1e-10
 Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
 Frame = +1

Query: 202 VGYVARVEGISMQPVLNPESMNTDYVFLSRWAVRDYHVKRGDVISLMSPKDPNQKIIKRV 381
           VG V    G SM+P +     N+D VF    +   Y ++RGD++   SP DP   I KRV
Sbjct: 30  VGGVVMCSGPSMEPTIQ----NSDIVFAENLSRHFYGIQRGDIVIAKSPSDPKSNICKRV 85

Query: 382 VALQGDVVSTLG---YKNQYVKIPEGHCWVEGDH 474
           + L+GD + T     +   +  +P GH W+EGD+
Sbjct: 86  IGLEGDKILTTSPSDFFKSHSYVPMGHVWLEGDN 119


>AK057788-1|BAB71573.1|  166|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25059 fis, clone CBL04610. ).
          Length = 166

 Score = 66.9 bits (156), Expect = 1e-10
 Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
 Frame = +1

Query: 202 VGYVARVEGISMQPVLNPESMNTDYVFLSRWAVRDYHVKRGDVISLMSPKDPNQKIIKRV 381
           VG V    G SM+P +     N+D VF    +   Y ++RGD++   SP DP   I KRV
Sbjct: 30  VGGVVMCSGPSMEPTIQ----NSDIVFAENLSRHFYGIQRGDIVIAKSPSDPKSNICKRV 85

Query: 382 VALQGDVVSTLG---YKNQYVKIPEGHCWVEGDH 474
           + L+GD + T     +   +  +P GH W+EGD+
Sbjct: 86  IGLEGDKILTTSPSDFFKSHSYVPMGHVWLEGDN 119


>AC005161-1|AAS07432.1|   34|Homo sapiens unknown protein.
          Length = 34

 Score = 52.0 bits (119), Expect = 3e-06
 Identities = 18/26 (69%), Positives = 23/26 (88%)
 Frame = +1

Query: 409 TLGYKNQYVKIPEGHCWVEGDHTGHT 486
           T+G+KN+YVK+P GH WVEGDH GH+
Sbjct: 1   TIGHKNRYVKVPRGHIWVEGDHHGHS 26


>AC073326-1|AAS07528.1|   39|Homo sapiens unknown protein.
          Length = 39

 Score = 48.0 bits (109), Expect = 5e-05
 Identities = 20/34 (58%), Positives = 25/34 (73%)
 Frame = +2

Query: 512 VSLGLVNARAVCIVWPPSRWQSLQAKLPENRQPV 613
           VSLGL++A A  I+WPP RWQ L++ LP  R PV
Sbjct: 1   VSLGLLHAHATHILWPPERWQKLESVLPPERLPV 34


>AC006392-2|AAS07496.1|   21|Homo sapiens unknown protein.
          Length = 21

 Score = 39.5 bits (88), Expect = 0.017
 Identities = 16/21 (76%), Positives = 20/21 (95%)
 Frame = +1

Query: 343 SPKDPNQKIIKRVVALQGDVV 405
           SPK+P QKIIKRV+AL+GD+V
Sbjct: 1   SPKNPEQKIIKRVIALEGDIV 21


>AC006392-1|AAS07497.1|   30|Homo sapiens unknown protein.
          Length = 30

 Score = 39.5 bits (88), Expect = 0.017
 Identities = 16/21 (76%), Positives = 20/21 (95%)
 Frame = +1

Query: 343 SPKDPNQKIIKRVVALQGDVV 405
           SPK+P QKIIKRV+AL+GD+V
Sbjct: 1   SPKNPEQKIIKRVIALEGDIV 21


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,887,739
Number of Sequences: 237096
Number of extensions: 2639898
Number of successful extensions: 6507
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6500
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11825849886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)