Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_D04
         (890 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0537 + 6970887-6971319,6971428-6971540,6971552-6972016           31   0.93 
04_01_0548 + 7103540-7103972,7104081-7104667                           31   1.2  
09_06_0306 + 22186853-22187267,22187553-22187818,22187913-221880...    29   3.8  
09_06_0299 - 22119427-22119477,22119823-22120193,22120503-22120914     29   3.8  
05_01_0064 + 454786-455646,456537-456752                               29   6.6  
10_08_0654 - 19616426-19616656,19617046-19617249,19617654-196178...    28   8.7  
02_05_0514 + 29686263-29686728,29687078-29687313,29687435-296875...    28   8.7  

>04_01_0537 + 6970887-6971319,6971428-6971540,6971552-6972016
          Length = 336

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = -1

Query: 407 QDDADRELHYQSFKKHLAEINXLXEKNPYTTFGINKFADYTPEXQQS 267
           +DDA++   ++ FK ++A I      N     G+N+FAD T +  +S
Sbjct: 49  KDDAEKARRFEVFKANVAFIESFNAGNHKFWLGVNQFADLTNDEFRS 95


>04_01_0548 + 7103540-7103972,7104081-7104667
          Length = 339

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -1

Query: 407 QDDADRELHYQSFKKHLAEINXLXEKNPYTTFGINKFADYT 285
           +DDA++   ++ FK ++A I      N     G+N+FAD T
Sbjct: 49  RDDAEKARRFEVFKANVAFIESFNAGNHNFWLGVNQFADLT 89


>09_06_0306 +
           22186853-22187267,22187553-22187818,22187913-22188053,
           22188521-22188772
          Length = 357

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -1

Query: 419 TGNTQDDADRELHYQSFKKHLAEINXLXEKNPYT-TFGINKFADYTPE 279
           + + +D AD+   ++ FKK+   I+    K   +   G+NKFAD T E
Sbjct: 37  SSSPRDLADKGSRFEVFKKNARYIHDFNRKKGMSYKLGLNKFADLTLE 84


>09_06_0299 - 22119427-22119477,22119823-22120193,22120503-22120914
          Length = 277

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = -1

Query: 404 DDADRELHYQSFKKHLAEINXLXEKNPYT-TFGINKFADYTPE 279
           D A+ E  +++FK +   ++   +K   T   G+NKFAD T E
Sbjct: 42  DVAETESRFEAFKANARYVSEFNKKEGMTYKLGLNKFADMTLE 84


>05_01_0064 + 454786-455646,456537-456752
          Length = 358

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = -1

Query: 380 YQSFKKHLAEINXLXEKNPYTTFGINKFADYT-PEXQQSRLGLRLPAKKT 234
           ++ FK +L  I+ + +K      G+N+FAD T  E + + LGL  P  ++
Sbjct: 72  FEVFKDNLNHIDDINKKVTSYWLGLNEFADLTHDEFKATYLGLTPPPTRS 121


>10_08_0654 -
           19616426-19616656,19617046-19617249,19617654-19617824,
           19619617-19620411
          Length = 466

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +2

Query: 185 FISXGIXFRXTEVAKLMSS*QAASIPTCSAVPQEYNQQI 301
           F++ G   R TE  K+ +S  A+  P C+ V    NQ+I
Sbjct: 222 FVAWGGSIRRTEGFKMSNSLNASRFPFCAVVMASTNQRI 260


>02_05_0514 +
           29686263-29686728,29687078-29687313,29687435-29687575,
           29687685-29687915
          Length = 357

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -1

Query: 380 YQSFKKHLAEINXLXEKNPYTTFGINKFADYT-PEXQQSRLGLR 252
           Y+ FK++L  I     +N     G+N FAD    E + S LGL+
Sbjct: 67  YEIFKRNLRHIVETNRRNGSYWLGLNHFADIAHEEFKASYLGLK 110


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,366,630
Number of Sequences: 37544
Number of extensions: 248032
Number of successful extensions: 464
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 464
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)