Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_D04
         (890 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021497-4|CAA16407.1|  386|Caenorhabditis elegans Hypothetical ...    31   1.1  
Z74026-3|CAA98418.1|  457|Caenorhabditis elegans Hypothetical pr...    31   1.5  
AF183390-1|AAF97864.1|  457|Caenorhabditis elegans Rh-like prote...    31   1.5  
U64859-10|AAC69091.2|  383|Caenorhabditis elegans Hypothetical p...    28   7.8  

>AL021497-4|CAA16407.1|  386|Caenorhabditis elegans Hypothetical
           protein Y51A2D.8 protein.
          Length = 386

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
 Frame = -1

Query: 407 QDDADRELHYQSFKKHLAEINXLXEKNPY----TTFGINKFADYTPEXQQSRLGLRLPAK 240
           +D+++ +  + +F K    ++ L  K+      T FGINKF+D +      RL   +P+ 
Sbjct: 55  KDESENQQRFNNFVKSYNNVDKLNAKSKAAGYDTQFGINKFSDLSTAEFHGRLSNVVPSN 114

Query: 239 KT 234
            T
Sbjct: 115 NT 116


>Z74026-3|CAA98418.1|  457|Caenorhabditis elegans Hypothetical
           protein B0240.1 protein.
          Length = 457

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -2

Query: 613 LSXLINVXYHVWIQLTLTKGRSAAXECGVVNSHSSNGVLGG 491
           ++ L++V  H WI   L +       CGV N H   G+L G
Sbjct: 300 IAALLSVIGHAWISPRLERTFHLFDTCGVHNLHGMPGILAG 340


>AF183390-1|AAF97864.1|  457|Caenorhabditis elegans Rh-like
           protein-1 protein.
          Length = 457

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -2

Query: 613 LSXLINVXYHVWIQLTLTKGRSAAXECGVVNSHSSNGVLGG 491
           ++ L++V  H WI   L +       CGV N H   G+L G
Sbjct: 300 IAALLSVIGHAWISPRLERTFHLFDTCGVHNLHGMPGILAG 340


>U64859-10|AAC69091.2|  383|Caenorhabditis elegans Hypothetical
           protein R09F10.1 protein.
          Length = 383

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -1

Query: 389 ELHYQSFKKHLAEINXLXEKNPYTTFGINKFADYTPEXQQ 270
           E  YQ F +++ E     E+N      +N+F D+T E  Q
Sbjct: 100 EYRYQIFLRNVIEFEAEEERNLGLDLDVNEFTDWTDEELQ 139


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,608,370
Number of Sequences: 27780
Number of extensions: 233292
Number of successful extensions: 423
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 423
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)