Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_D03
         (940 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC048255-1|AAH48255.1|  376|Homo sapiens cathepsin W protein.          39   0.023
AF055903-1|AAC32181.1|  376|Homo sapiens cathepsin W protein.          39   0.023
AF015954-1|AAB82457.1|  376|Homo sapiens lymphopain protein.           39   0.023
AF013611-1|AAB82449.1|  376|Homo sapiens lymphopain protein.           39   0.023

>BC048255-1|AAH48255.1|  376|Homo sapiens cathepsin W protein.
          Length = 376

 Score = 39.1 bits (87), Expect = 0.023
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
 Frame = +1

Query: 124 QAKELFEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTT-FGINKFADYTP 300
           + KE F++F  + NR Y    +       F  +LA+  +L E++  T  FG+  F+D T 
Sbjct: 37  ELKEAFKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTE 96

Query: 301 EEQQSRLGLRLPA 339
           EE     G R  A
Sbjct: 97  EEFGQLYGYRRAA 109


>AF055903-1|AAC32181.1|  376|Homo sapiens cathepsin W protein.
          Length = 376

 Score = 39.1 bits (87), Expect = 0.023
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
 Frame = +1

Query: 124 QAKELFEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTT-FGINKFADYTP 300
           + KE F++F  + NR Y    +       F  +LA+  +L E++  T  FG+  F+D T 
Sbjct: 37  ELKEAFKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTE 96

Query: 301 EEQQSRLGLRLPA 339
           EE     G R  A
Sbjct: 97  EEFGQLYGYRRAA 109


>AF015954-1|AAB82457.1|  376|Homo sapiens lymphopain protein.
          Length = 376

 Score = 39.1 bits (87), Expect = 0.023
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
 Frame = +1

Query: 124 QAKELFEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTT-FGINKFADYTP 300
           + KE F++F  + NR Y    +       F  +LA+  +L E++  T  FG+  F+D T 
Sbjct: 37  ELKEAFKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTE 96

Query: 301 EEQQSRLGLRLPA 339
           EE     G R  A
Sbjct: 97  EEFGQLYGYRRAA 109


>AF013611-1|AAB82449.1|  376|Homo sapiens lymphopain protein.
          Length = 376

 Score = 39.1 bits (87), Expect = 0.023
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
 Frame = +1

Query: 124 QAKELFEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTT-FGINKFADYTP 300
           + KE F++F  + NR Y    +       F  +LA+  +L E++  T  FG+  F+D T 
Sbjct: 37  ELKEAFKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTE 96

Query: 301 EEQQSRLGLRLPA 339
           EE     G R  A
Sbjct: 97  EEFGQLYGYRRAA 109


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,194,694
Number of Sequences: 237096
Number of extensions: 1382874
Number of successful extensions: 6987
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6987
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12325533684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)