Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_D03
(940 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g35350.2 68417.m05022 cysteine endopeptidase, papain-type (XC... 54 2e-07
At4g35350.1 68417.m05023 cysteine endopeptidase, papain-type (XC... 54 2e-07
At4g23520.1 68417.m03390 cysteine proteinase, putative contains ... 48 9e-06
At2g34080.1 68415.m04172 cysteine proteinase, putative contains ... 47 2e-05
At1g29110.1 68414.m03563 cysteine proteinase, putative contains ... 47 2e-05
At1g20850.1 68414.m02612 cysteine endopeptidase, papain-type (XC... 44 1e-04
At2g27420.1 68415.m03314 cysteine proteinase, putative contains ... 44 1e-04
At1g29090.1 68414.m03561 peptidase C1A papain family protein con... 44 2e-04
At3g43960.1 68416.m04706 cysteine proteinase, putative contains ... 42 4e-04
At5g60360.1 68418.m07568 cysteine proteinase, putative / AALP pr... 40 0.002
At5g43060.1 68418.m05256 cysteine proteinase, putative / thiol p... 40 0.002
At1g47128.1 68414.m05222 cysteine proteinase (RD21A) / thiol pro... 40 0.002
At4g16190.1 68417.m02457 cysteine proteinase, putative contains ... 37 0.022
At3g45310.1 68416.m04892 cysteine proteinase, putative similar t... 36 0.029
At1g29080.1 68414.m03560 peptidase C1A papain family protein con... 36 0.029
At4g11320.1 68417.m01828 cysteine proteinase, putative contains ... 36 0.039
At5g45890.1 68418.m05644 senescence-specific SAG12 protein (SAG1... 34 0.16
At5g50260.1 68418.m06224 cysteine proteinase, putative similar t... 33 0.36
At3g48340.1 68416.m05276 cysteine proteinase, putative similar t... 31 1.1
At5g66210.2 68418.m08341 calcium-dependent protein kinase family... 30 1.9
At5g66210.1 68418.m08340 calcium-dependent protein kinase family... 30 1.9
At2g35650.1 68415.m04372 glycosyl transferase family 2 protein s... 29 4.4
At3g60290.1 68416.m06739 oxidoreductase, 2OG-Fe(II) oxygenase fa... 28 7.8
At2g42920.1 68415.m05318 pentatricopeptide (PPR) repeat-containi... 28 7.8
>At4g35350.2 68417.m05022 cysteine endopeptidase, papain-type (XCP1)
identical to papain-type cysteine endopeptidase XCP1
GI:6708181 from [Arabidopsis thaliana]
Length = 288
Score = 53.6 bits (123), Expect = 2e-07
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Frame = +1
Query: 52 ALLIATVVMASSAETDTPRHY-DLNQAKELFEIFVKEHNREYKDDADRELHYQSFKKHLA 228
ALL S TP H + ++ ELFE ++ EH++ YK ++ ++ F+++L
Sbjct: 21 ALLCCAFARDFSIVGYTPEHLTNTDKLLELFESWMSEHSKAYKSVEEKVHRFEVFRENLM 80
Query: 229 EINQLNEKNPYTTFGINKFADYTPEEQQSR-LGLRLP 336
I+Q N + G+N+FAD T EE + R LGL P
Sbjct: 81 HIDQRNNEINSYWLGLNEFADLTHEEFKGRYLGLAKP 117
>At4g35350.1 68417.m05023 cysteine endopeptidase, papain-type (XCP1)
identical to papain-type cysteine endopeptidase XCP1
GI:6708181 from [Arabidopsis thaliana]
Length = 355
Score = 53.6 bits (123), Expect = 2e-07
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Frame = +1
Query: 52 ALLIATVVMASSAETDTPRHY-DLNQAKELFEIFVKEHNREYKDDADRELHYQSFKKHLA 228
ALL S TP H + ++ ELFE ++ EH++ YK ++ ++ F+++L
Sbjct: 21 ALLCCAFARDFSIVGYTPEHLTNTDKLLELFESWMSEHSKAYKSVEEKVHRFEVFRENLM 80
Query: 229 EINQLNEKNPYTTFGINKFADYTPEEQQSR-LGLRLP 336
I+Q N + G+N+FAD T EE + R LGL P
Sbjct: 81 HIDQRNNEINSYWLGLNEFADLTHEEFKGRYLGLAKP 117
>At4g23520.1 68417.m03390 cysteine proteinase, putative contains
similarity to cysteine proteinase (thiol protease) RD21A
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 356
Score = 48.0 bits (109), Expect = 9e-06
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Frame = +1
Query: 55 LLIATVVMASSAETDTPR----HYDLNQAKE-LFEIFVKEHNREYKDD-ADRELHYQSFK 216
LLI V+ A S+ D P H N+ E +F++++ +H + Y + ++E +Q+FK
Sbjct: 14 LLIVFVLSAPSSAMDLPATSGGHNRSNEEVEFIFQMWMSKHGKTYTNALGEKERRFQNFK 73
Query: 217 KHLAEINQLNEKNPYTTFGINKFADYTPEE 306
+L I+Q N KN G+ +FAD T +E
Sbjct: 74 DNLRFIDQHNAKNLSYQLGLTRFADLTVQE 103
>At2g34080.1 68415.m04172 cysteine proteinase, putative contains
similarity to cysteine protease SPCP1 GI:13491750 from
[Ipomoea batatas]
Length = 345
Score = 47.2 bits (107), Expect = 2e-05
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = +1
Query: 40 LVSVALLIATVVMASSAETDTPRHYDLNQAKELFEIFVKEHNREYKDDADRELHYQSFKK 219
LV+V +++ T S A + T + + + E ++ +REY+D+ ++ + FKK
Sbjct: 7 LVTVLIILFTGFRISQATSRTVIFREQSMVDK-HEQWMARFSREYRDELEKNMRRDVFKK 65
Query: 220 HLAEINQLNEK-NPYTTFGINKFADYTPEE 306
+L I N+K N G+N+FAD+T EE
Sbjct: 66 NLKFIENFNKKGNKSYKLGVNEFADWTNEE 95
>At1g29110.1 68414.m03563 cysteine proteinase, putative contains
similarity to cysteine protease SPCP1 GI:13491750 from
[Ipomoea batatas]
Length = 334
Score = 46.8 bits (106), Expect = 2e-05
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 6/104 (5%)
Frame = +1
Query: 40 LVSV-ALLIATVVMASSAETDTPR-HYDLNQAK--ELFEIFVKEHNREYKDDADRELHYQ 207
+VSV ++ +A +++ R H LN+ + + ++ + +R YKD++++E+ +
Sbjct: 1 MVSVRSVFVALTILSMDLRISQARPHVTLNEQSIVDYHQQWMTQFSRVYKDESEKEMRLK 60
Query: 208 SFKKHLAEINQLNEK-NPYTTFGINKFADYTPEE-QQSRLGLRL 333
FKK+L I N N T G+N+F D+ EE + GLR+
Sbjct: 61 VFKKNLKFIENFNNMGNQSYTLGVNEFTDWKTEEFLATHTGLRV 104
>At1g20850.1 68414.m02612 cysteine endopeptidase, papain-type (XCP2)
identical to papain-type cysteine endopeptidase XCP2
GI:6708183 from [Arabidopsis thaliana]
Length = 356
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +1
Query: 133 ELFEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEE-Q 309
ELFE ++ + Y+ ++ L ++ FK +L I++ N+K G+N+FAD + EE +
Sbjct: 49 ELFENWISNFEKAYETVEEKFLRFEVFKDNLKHIDETNKKGKSYWLGLNEFADLSHEEFK 108
Query: 310 QSRLGLR 330
+ LGL+
Sbjct: 109 KMYLGLK 115
>At2g27420.1 68415.m03314 cysteine proteinase, putative contains
similarity to cysteine protease SPCP1 GI:13491750 from
[Ipomoea batatas]
Length = 348
Score = 44.0 bits (99), Expect = 1e-04
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Frame = +1
Query: 40 LVSVALLIATVVMASSAETDTPRHYDLN-QAKELFEIFVKEHNREYKDDADRELHYQSFK 216
+ S + I T+ ++ T R A E E ++ NR Y D+ ++ + FK
Sbjct: 1 MASTIIFILTIFLSYRTSLATSRGSLFEASAIEKHEQWMARFNRVYSDETEKRNRFNIFK 60
Query: 217 KHLAEINQLNEKNPYT-TFGINKFADYTPEE-QQSRLGLRLPAKKT*VLRLQS 369
K+L + N N T IN+F+D T EE + + GL +P T + L S
Sbjct: 61 KNLEFVQNFNMNNKITYKVDINEFSDLTDEEFRATHTGLVVPEAITRISTLSS 113
>At1g29090.1 68414.m03561 peptidase C1A papain family protein
contains similarity to cysteine protease SPCP1
GI:13491750 from [Ipomoea batatas]; contains Pfam
profile PF00112: Papain family cysteine protease
Length = 355
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +1
Query: 163 NREYKDDADRELHYQSFKKHLAEINQLNEKNPYT-TFGINKFADYTPEE 306
+R Y D+ ++++ + FKK+L I + N+K T G+N+FAD+T EE
Sbjct: 55 SRVYSDELEKQMRFDVFKKNLKFIEKFNKKGDRTYKLGVNEFADWTREE 103
>At3g43960.1 68416.m04706 cysteine proteinase, putative contains
similarity to cysteine proteinase RD21A (thiol protease)
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 376
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/103 (25%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Frame = +1
Query: 40 LVSVALLIATVVMASSAETDTPRHYDLNQAKELFEIFVKEHNREYKDDADRELHYQSFKK 219
L+++++L+ ++ + T++ R+ + ++E ++ E+ + Y ++E ++ FK
Sbjct: 10 LLTLSVLLISISLGVVTATESQRNE--GEVLTMYEQWLVENGKNYNGLGEKERRFKIFKD 67
Query: 220 HLAEINQLN-EKNPYTTFGINKFADYTPEE-QQSRLGLRLPAK 342
+L I + N + N G+NKF+D T +E Q S LG ++ K
Sbjct: 68 NLKRIEEHNSDPNRSYERGLNKFSDLTADEFQASYLGGKMEKK 110
>At5g60360.1 68418.m07568 cysteine proteinase, putative / AALP
protein (AALP) identical to AALP protein GI:7230640 from
[Arabidopsis thaliana]; similar to barley aleurain
Length = 358
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 139 FEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEE-QQS 315
F F + ++Y++ + +L + FK++L I N+K G+N+FAD T +E Q++
Sbjct: 59 FARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQRT 118
Query: 316 RLG 324
+LG
Sbjct: 119 KLG 121
>At5g43060.1 68418.m05256 cysteine proteinase, putative / thiol
protease, putative similar to cysteine proteinase RD21A
precursor (thiol protease) GI:435619, SP:P43297 from
[Arabidopsis thaliana]
Length = 463
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/106 (25%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Frame = +1
Query: 43 VSVALLIATVVMASSAETDTPRHYDLNQAKELFEIFVKEHNREYKDD----ADRELHYQS 210
VS A+ ++ + + T ++ + ++E ++ EH ++ + A+++ ++
Sbjct: 18 VSYAMDMSIISYDENHHITTETSRSDSEVERIYEAWMVEHGKKKMNQNGLGAEKDQRFEI 77
Query: 211 FKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQSR-LGLRLPAKK 345
FK +L I++ N KN G+ +FAD T EE +S LG + P K+
Sbjct: 78 FKDNLRFIDEHNTKNLSYKLGLTRFADLTNEEYRSMYLGAK-PTKR 122
>At1g47128.1 68414.m05222 cysteine proteinase (RD21A) / thiol
protease identical to SP|P43297 Cysteine proteinase
RD21A precursor (EC 3.4.22.-) {Arabidopsis thaliana},
thiol protease RD21A SP:P43297 from [Arabidopsis
thaliana]
Length = 462
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/76 (25%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Frame = +1
Query: 124 QAKELFEIFVKEHNREYKDDA--DRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYT 297
+ ++E ++ +H + ++ +++ ++ FK +L +++ NEKN G+ +FAD T
Sbjct: 45 EVMSIYEAWLVKHGKAQSQNSLVEKDRRFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLT 104
Query: 298 PEEQQSR-LGLRLPAK 342
+E +S+ LG ++ K
Sbjct: 105 NDEYRSKYLGAKMEKK 120
>At4g16190.1 68417.m02457 cysteine proteinase, putative contains
similarity to papain-like cysteine proteinase isoform I
GI:7381219 from [Ipomoea batatas]
Length = 373
Score = 36.7 bits (81), Expect = 0.022
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 118 LNQAKELFEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYT 297
L A+ F +F ++ + Y + + ++ FK +L + +P G+ +F+D T
Sbjct: 48 LLNAEHHFTLFKSKYEKTYATQVEHDHRFRVFKANLRRARRNQLLDPSAVHGVTQFSDLT 107
Query: 298 PEE-QQSRLGLR 330
P+E ++ LGL+
Sbjct: 108 PKEFRRKFLGLK 119
>At3g45310.1 68416.m04892 cysteine proteinase, putative similar to
AALP protein GI:7230640 from [Arabidopsis thaliana] and
barley aleurain
Length = 358
Score = 36.3 bits (80), Expect = 0.029
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 139 FEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEE-QQS 315
F F + ++Y+ + +L + FK++L I N+K +N+FAD T +E Q+
Sbjct: 59 FSRFTHRYGKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQRY 118
Query: 316 RLG 324
+LG
Sbjct: 119 KLG 121
>At1g29080.1 68414.m03560 peptidase C1A papain family protein
contains similarity to cysteine protease SPCP1
GI:13491750 from [Ipomoea batatas]; contains Pfam
profile PF00112: Papain family cysteine protease
Length = 346
Score = 36.3 bits (80), Expect = 0.029
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +1
Query: 37 DLVSVALLIATVVMASSAETDTPRHYDLNQAKELFEIFVKEHNREYKDDADRELHYQSFK 216
+ V V L I + + S T Y + + + ++ + +R Y D+ +++L Q
Sbjct: 5 EFVCVVLTIFFMDLKISEATSRVALYKPSSIVDYHQQWMIQFSRVYDDEFEKQLRLQVLT 64
Query: 217 KHLAEINQLNEK-NPYTTFGINKFADYTPEE 306
++L I N N G+N+F D+T EE
Sbjct: 65 ENLKFIESFNNMGNQSYKLGVNEFTDWTKEE 95
>At4g11320.1 68417.m01828 cysteine proteinase, putative contains
similarity to cysteine proteinase RD21A (thiol protease)
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 371
Score = 35.9 bits (79), Expect = 0.039
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +1
Query: 124 QAKELFEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPE 303
+A +FE ++ +H + Y A++E F+ +L I N +N G+N+FAD +
Sbjct: 51 EATLMFESWMVKHGKVYDSVAEKERRLTIFEDNLRFITNRNAENLSYRLGLNRFADLSLH 110
Query: 304 E 306
E
Sbjct: 111 E 111
>At5g45890.1 68418.m05644 senescence-specific SAG12 protein (SAG12)
/ cysteine proteinase, putative identical to
senescence-specific protein SAG12 GI:1046373 from
[Arabidopsis thaliana]
Length = 346
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 148 FVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTF--GINKFADYTPEEQQS 315
++ +H R Y D + Y FK ++ I LN TF +N+FAD T +E +S
Sbjct: 41 WMTKHGRVYADVKEENNRYVVFKNNVERIEHLNSIPAGRTFKLAVNQFADLTNDEFRS 98
>At5g50260.1 68418.m06224 cysteine proteinase, putative similar to
cysteine endopeptidase precursor CysEP GI:2944446 from
[Ricinus communis]
Length = 361
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +1
Query: 121 NQAKELFEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTP 300
N EL+E + + H+ + ++ + FK ++ I++ N+K+ +NKF D T
Sbjct: 32 NSLWELYERW-RSHHTVARSLEEKAKRFNVFKHNVKHIHETNKKDKSYKLKLNKFGDMTS 90
Query: 301 EE 306
EE
Sbjct: 91 EE 92
>At3g48340.1 68416.m05276 cysteine proteinase, putative similar to
cysteine endopeptidase precursor [Ricinus communis]
GI:2944446; contains Pfam profile PF00112: Papain family
cysteine protease
Length = 351
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +1
Query: 154 KEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEE 306
+ H+ + +RE + F+ ++ ++ N+KN +NKFAD T E
Sbjct: 42 RSHHSVPRSLNEREKRFNVFRHNVMHVHNTNKKNRSYKLKLNKFADLTINE 92
>At5g66210.2 68418.m08341 calcium-dependent protein kinase family
protein / CDPK family protein contains Pfam domains,
PF00069: Protein kinase domain and PF00036: EF hand
Length = 523
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 196 LHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQSRLGLR 330
LH ++H +E QL + + F ++K TPEE + GLR
Sbjct: 432 LHVHQLEEHDSEKWQLRSRAAFEKFDLDKDGYITPEELRMHTGLR 476
>At5g66210.1 68418.m08340 calcium-dependent protein kinase family
protein / CDPK family protein contains Pfam domains,
PF00069: Protein kinase domain and PF00036: EF hand
Length = 523
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 196 LHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQSRLGLR 330
LH ++H +E QL + + F ++K TPEE + GLR
Sbjct: 432 LHVHQLEEHDSEKWQLRSRAAFEKFDLDKDGYITPEELRMHTGLR 476
>At2g35650.1 68415.m04372 glycosyl transferase family 2 protein
similar to beta-(1-3)-glucosyl transferase GB:AAC62210
GI:3687658 from [Bradyrhizobium japonicum], cellulose
synthase from Agrobacterium tumeficiens [gi:710492] and
Agrobacterium radiobacter [gi:710493]; contains Pfam
glycosyl transferase, group 2 family protein domain
PF00535; identical to cDNA for partial mRNA for
glycosyltransferase (cslA07 gene) GI:28551963
Length = 556
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/68 (25%), Positives = 36/68 (52%)
Frame = -2
Query: 360 SQNLCLLSRQPQSQPALLFLRSIISKFVNAKRSIWILLVQLVYLCQVFLE*LIMQLSVGI 181
S L LS+ S+ ++ FL + S+ + A+ +W L++ V + VF +++ L + +
Sbjct: 16 SSFLLSLSQAGSSKTSVAFLNAFKSEDIIARIGLWWQLIRAVVVVPVFKFLVLLCLVMSV 75
Query: 180 ILVFPVMF 157
+ VM+
Sbjct: 76 MFFVEVMY 83
>At3g60290.1 68416.m06739 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to flavonol synthase 1
[SP|Q96330], gibberellin 20-oxidase [GI:9791186];
contains PF03171 2OG-Fe(II) oxygenase superfamily domain
Length = 316
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +1
Query: 163 NREYKDDADRELHYQSFKKHLAEINQL-NEKNP--YTTFGINKFADY 294
N++YK + LH K ++ QL NE P Y F N F DY
Sbjct: 250 NKDYKRLSFASLHSLPMHKKISPATQLVNENKPAAYGEFSFNDFLDY 296
>At2g42920.1 68415.m05318 pentatricopeptide (PPR) repeat-containing
protein and genefinder
Length = 559
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -3
Query: 392 FVWNSIPID*SRRTYVFLAGSLNPNLLCCSSGV*SANLLMPNV 264
FVWN+I SR ++ +A S+ ++LC S V L P+V
Sbjct: 90 FVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSV 132
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,486,755
Number of Sequences: 28952
Number of extensions: 208174
Number of successful extensions: 526
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 523
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2246578488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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