Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_D02
         (901 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.4  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   3.1  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   3.1  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   3.1  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   7.2  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   9.6  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 3/33 (9%)
 Frame = -1

Query: 661 PPFGXPGGXXLGGGXGGP---XPXXPFPXGXGG 572
           PP G P     GG  GGP    P  P   G GG
Sbjct: 589 PPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGG 621



 Score = 25.4 bits (53), Expect = 2.4
 Identities = 16/38 (42%), Positives = 16/38 (42%)
 Frame = +3

Query: 558 PXXGPPPXPXGXGFXGXGPPXPPPKXXPPGXPXGGAXP 671
           P  GPPP P   G  G GP    P   P     GGA P
Sbjct: 589 PPMGPPPSPLAGGPLG-GPAGSRP-PLPNLLGFGGAAP 624



 Score = 25.0 bits (52), Expect = 3.1
 Identities = 12/30 (40%), Positives = 12/30 (40%)
 Frame = +3

Query: 558 PXXGPPPXPXGXGFXGXGPPXPPPKXXPPG 647
           P  GPP      G    G P  PP   PPG
Sbjct: 508 PNDGPPHGAGYDGRDLTGGPLGPPPPPPPG 537



 Score = 25.0 bits (52), Expect = 3.1
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +3

Query: 612 PPXPPPKXXPPGXPXGG 662
           PP PPP   PP    GG
Sbjct: 585 PPPPPPMGPPPSPLAGG 601



 Score = 24.6 bits (51), Expect = 4.1
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = +3

Query: 291 PXGXPXRPXKKKXPXXXPPXXGGXPP 368
           P G P  P  +  P   PP   G PP
Sbjct: 570 PAGFPNLPNAQPPPAPPPPPPMGPPP 595



 Score = 23.8 bits (49), Expect = 7.2
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -3

Query: 509 PXXPPPPXPRXGGXXGG 459
           P   PPP P  GG  GG
Sbjct: 589 PPMGPPPSPLAGGPLGG 605



 Score = 23.4 bits (48), Expect = 9.6
 Identities = 15/56 (26%), Positives = 15/56 (26%)
 Frame = +3

Query: 558 PXXGPPPXPXGXGFXGXGPPXPPPKXXPPGXPXGGAXPXXXXGXKXFXPXPPRXPP 725
           P   PPP P G       P   PP       P     P        F   P   PP
Sbjct: 527 PLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPP 582


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
 Frame = +3

Query: 576 PXPXGXGFX-GXGPPXPPPKXXPPGXPXGG 662
           P P    F  G G P PPP   P     GG
Sbjct: 769 PSPSRSAFADGIGSPPPPPPPPPSSLSPGG 798


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
 Frame = -1

Query: 652 GXPGGXXLGG--GXGGPXPXXPFPXGXGGG 569
           G  GG   GG  G GG     P P G GGG
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGPGGGGGG 230



 Score = 25.0 bits (52), Expect = 3.1
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = -1

Query: 652 GXPGGXXLGGGXGGPXPXXPFPXGXGGG 569
           G  GG   GGG G      P   G GGG
Sbjct: 205 GGSGGGAPGGGGGSSGGPGPGGGGGGGG 232


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +3

Query: 582 PXGXGFXGXGPPXPPPKXXPPGXP 653
           P   G  G  P  PP +  PPG P
Sbjct: 698 PGEKGQKGETPQLPPQRKGPPGPP 721


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 11/28 (39%), Positives = 11/28 (39%)
 Frame = -1

Query: 640 GXXLGGGXGGPXPXXPFPXGXGGGPXXG 557
           G    G  G P P  P   G  GGP  G
Sbjct: 288 GGMPSGMVGPPRPPMPMQGGAPGGPPQG 315


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = -1

Query: 670 GXAPPFGXPGGXXLGGGXGGPXPXXP 593
           G A P G PGG    G  G P P  P
Sbjct: 395 GIAGPAGAPGGGE--GRPGAPGPKGP 418


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.316    0.148    0.500 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 430,837
Number of Sequences: 2352
Number of extensions: 6936
Number of successful extensions: 27
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97160985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)