Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_C24
         (942 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.                  33   2.0  
AF363689-1|AAK73515.1| 1608|Homo sapiens capicua protein protein.      31   4.6  
AC006486-3|AAD11988.1| 1453|Homo sapiens BC85722_1 protein.            31   4.6  
AB002304-1|BAA20765.1| 1451|Homo sapiens KIAA0306 protein.             31   4.6  
BC038446-1|AAH38446.1|  673|Homo sapiens SF1 protein protein.          31   8.0  
AB209153-1|BAD92390.1| 1332|Homo sapiens formin 2 variant protein.     31   8.0  

>AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.
          Length = 5262

 Score = 32.7 bits (71), Expect = 2.0
 Identities = 20/83 (24%), Positives = 29/83 (34%)
 Frame = +2

Query: 632 APPPXXGPXKXTLXXXGAKPGQEL*KXRXFPLXETPPAPXXTXPXAXPENXGGXHPPXKK 811
           +PPP   P         + P   L +    P  E+PP+P    P + P       PP ++
Sbjct: 495 SPPPEESPLSPP---PESSPFSPLEESPLSPPEESPPSPALETPLSPPPEASPLSPPFEE 551

Query: 812 XXXGXPRESPXRXXPPXXANXXP 880
                P E      PP  +   P
Sbjct: 552 SPLSPPPEELPTSPPPEASRLSP 574


>AF363689-1|AAK73515.1| 1608|Homo sapiens capicua protein protein.
          Length = 1608

 Score = 31.5 bits (68), Expect = 4.6
 Identities = 17/61 (27%), Positives = 19/61 (31%)
 Frame = +2

Query: 722  PLXETPPAPXXTXPXAXPENXGGXHPPXKKXXXGXPRESPXRXXPPXXANXXPXGXGATX 901
            PL   PP      P   P   GG  P       G  + +P    PP      P   GA  
Sbjct: 1534 PLPVPPPTGTAAAPAPTPSPAGGPDPTSPSSDSGTAQAAPPLPPPPESGPGQPGWEGAPQ 1593

Query: 902  P 904
            P
Sbjct: 1594 P 1594


>AC006486-3|AAD11988.1| 1453|Homo sapiens BC85722_1 protein.
          Length = 1453

 Score = 31.5 bits (68), Expect = 4.6
 Identities = 17/61 (27%), Positives = 19/61 (31%)
 Frame = +2

Query: 722  PLXETPPAPXXTXPXAXPENXGGXHPPXKKXXXGXPRESPXRXXPPXXANXXPXGXGATX 901
            PL   PP      P   P   GG  P       G  + +P    PP      P   GA  
Sbjct: 1379 PLPVPPPTGTAAAPAPTPSPAGGPDPTSPSSDSGTAQAAPPLPPPPESGPGQPGWEGAPQ 1438

Query: 902  P 904
            P
Sbjct: 1439 P 1439


>AB002304-1|BAA20765.1| 1451|Homo sapiens KIAA0306 protein.
          Length = 1451

 Score = 31.5 bits (68), Expect = 4.6
 Identities = 17/61 (27%), Positives = 19/61 (31%)
 Frame = +2

Query: 722  PLXETPPAPXXTXPXAXPENXGGXHPPXKKXXXGXPRESPXRXXPPXXANXXPXGXGATX 901
            PL   PP      P   P   GG  P       G  + +P    PP      P   GA  
Sbjct: 1377 PLPVPPPTGTAAAPAPTPSPAGGPDPTSPSSDSGTAQAAPPLPPPPESGPGQPGWEGAPQ 1436

Query: 902  P 904
            P
Sbjct: 1437 P 1437


>BC038446-1|AAH38446.1|  673|Homo sapiens SF1 protein protein.
          Length = 673

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 32/120 (26%), Positives = 36/120 (30%), Gaps = 7/120 (5%)
 Frame = +2

Query: 596 PXKCPXAGGGXXAP-PPXXGPXKXTLXXXGAKPGQEL*KXRXFPLXETPPAPXXTXPXAX 772
           P   P  G G  AP PP   P         A P   L      P    PP P    P   
Sbjct: 32  PPPAPGPGAGLLAPGPPPPPPVGSMGALTAAFPFAALPPP---PPPPPPPPPQQPPPPPP 88

Query: 773 PENXGGXHPPXKKXXXG--XPRESPXRXXPP----XXANXXPXGXGATXPXLXRXSRAXN 934
           P + G  +PP +         R SP +  PP          P G G   P   R     N
Sbjct: 89  PPSPGASYPPPQPPPPPPLYQRVSPPQPPPPQPPRKDQQPGPAGGGGDFPSKKRKRSRWN 148


>AB209153-1|BAD92390.1| 1332|Homo sapiens formin 2 variant protein.
          Length = 1332

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 27/98 (27%), Positives = 29/98 (29%), Gaps = 3/98 (3%)
 Frame = +2

Query: 596  PXKCPXAGGGXXAPPPXXG---PXKXTLXXXGAKPGQEL*KXRXFPLXETPPAPXXTXPX 766
            P   P  G G   PPP  G   P    L   G  P   L       +   PP P    P 
Sbjct: 751  PPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPL---PGVGIPPPPPLPGVGIPP 807

Query: 767  AXPENXGGXHPPXKKXXXGXPRESPXRXXPPXXANXXP 880
              P    G  PP      G P  +P    PP      P
Sbjct: 808  PPPLPGAGIPPPPPLPGMGIP-PAPAPPLPPPGTGIPP 844


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,405,810
Number of Sequences: 237096
Number of extensions: 880308
Number of successful extensions: 6111
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5840
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12381054106
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)