Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_C23
(893 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.077
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 35 0.077
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 33 0.24
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 33 0.31
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.31
SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051) 31 0.95
SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 30 2.9
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 29 3.8
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 29 3.8
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 29 6.7
SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069) 29 6.7
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 29 6.7
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 29 6.7
SB_37025| Best HMM Match : Homeobox (HMM E-Value=1.3e-16) 28 8.9
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 35.1 bits (77), Expect = 0.077
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = +3
Query: 540 PXPPPPXGGXXXPXRXGGXP-PKKXXXXXPPKXPPHP 647
P PPPP GG P G P P PP PP P
Sbjct: 953 PPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPPP 989
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/79 (26%), Positives = 21/79 (26%), Gaps = 4/79 (5%)
Frame = +3
Query: 522 GXXXPHPXPPPPXGGXXXPXRXGG----XPPKKXXXXXPPKXPPHPKXXXXGGXXXXXXX 689
G P P PPP P GG PP PP PP GG
Sbjct: 916 GGSVPPPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPP 975
Query: 690 XXXXXXXXXXXXXGGPPPP 746
PPPP
Sbjct: 976 PPGGSAPPPPPPPPPPPPP 994
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 35.1 bits (77), Expect = 0.077
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPP 641
P P PPPP GG P PP PP PP
Sbjct: 302 PAPPPPPPPGGAPPPPPPPPPPPPGDGGAPPPPPPP 337
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +3
Query: 522 GXXXPHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHPKXXXXGG 668
G P P PPP G P PP PP PP P GG
Sbjct: 286 GGGAPVPPPPPADGSAPAPP-----PPPPPGGAPPPPPPPPPPPPGDGG 329
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 33.5 bits (73), Expect = 0.24
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = +3
Query: 522 GXXXPHPXPPPPXGG-XXXPXRXGGXPPKKXXXXXPPKXP 638
G P P PPPP GG P G PP PP P
Sbjct: 359 GGAAPPPPPPPPVGGPPPPPPPIEGRPPSSLGNPPPPPPP 398
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 546 PPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPP 641
PPPP G P G PP PP PP
Sbjct: 338 PPPPSRGAPPPPSMGMAPPPVGGAAPPPPPPP 369
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 540 PXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXP 638
P PPP G P G PP PP P
Sbjct: 287 PPPPPSRGAAPPPPSRGAPPPPPSRGSAPPPPP 319
Score = 28.3 bits (60), Expect = 8.9
Identities = 21/79 (26%), Positives = 21/79 (26%), Gaps = 4/79 (5%)
Frame = +3
Query: 540 PXPPPPXGGXXXPXRXGGXPPKKXXXXXPP----KXPPHPKXXXXGGXXXXXXXXXXXXX 707
P PPP P G PP PP PP P GG
Sbjct: 327 PPPPPSRSSQRPPPPSRGAPPPPSMGMAPPPVGGAAPPPPPPPPVGGPPPPPPPIEGRPP 386
Query: 708 XXXXXXXGGPPPPXGXXKP 764
PPPP G P
Sbjct: 387 SSLGNPP--PPPPPGRGAP 403
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHP 647
P P PPPP P + PP PP PP P
Sbjct: 378 PPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPP 415
Score = 31.9 bits (69), Expect = 0.72
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHP 647
P P PPPP P PP PP PP P
Sbjct: 368 PPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPP 405
Score = 31.9 bits (69), Expect = 0.72
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHP 647
P P PPPP P PP PP PP P
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPP 406
Score = 31.9 bits (69), Expect = 0.72
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHP 647
P P PPPP P PP PP PP P
Sbjct: 379 PPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPP 416
Score = 31.9 bits (69), Expect = 0.72
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHP 647
P P PPPP P PP PP PP P
Sbjct: 393 PQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPP 430
Score = 31.5 bits (68), Expect = 0.95
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHP 647
P P PPPP P PP PP PP P
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPP 402
Score = 31.5 bits (68), Expect = 0.95
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHP 647
P P PPPP P PP PP PP P
Sbjct: 376 PSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPP 413
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHP 647
P P PPPP P PP PP PP P
Sbjct: 391 PPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHP 647
P P PPPP P PP PP PP P
Sbjct: 395 PPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPP 432
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHP 647
P P PPP P PP + PP PP P
Sbjct: 370 PPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPP 407
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +3
Query: 516 GXGXXXPHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHP 647
G P P PPPP P PP PP+ PP P
Sbjct: 360 GINMSPPPPPPPPPPPPSPPPP----PPPPPPSPPPPPQPPPPP 399
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHP 647
P P PP P P PP+ PP PP P
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPP 408
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHP 647
P P PPP P PP PP PP P
Sbjct: 387 PSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPP 424
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPP 641
P P PPP G P G PP PP PP
Sbjct: 374 PPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPPP 409
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/43 (30%), Positives = 14/43 (32%)
Frame = +3
Query: 513 GGXGXXXPHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPP 641
G G +P PPP P PP PP PP
Sbjct: 337 GTSGGGGVNPPPPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPP 379
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPP 629
P P PPP G P G PP PP
Sbjct: 384 PPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPP 415
>SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051)
Length = 421
Score = 31.5 bits (68), Expect = 0.95
Identities = 21/77 (27%), Positives = 22/77 (28%)
Frame = +3
Query: 513 GGXGXXXPHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHPKXXXXGGXXXXXXXX 692
GG P PPP P GG PP+ P PP GG
Sbjct: 194 GGYQQPPPGGYAPPPY----VPQEGGGIPPQNHPLTNYPAPPPQGYAPPPGGYPGAPPAG 249
Query: 693 XXXXXXXXXXXXGGPPP 743
GGPPP
Sbjct: 250 GYPGAPPPGGYPGGPPP 266
>SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 4/47 (8%)
Frame = +3
Query: 540 PXPPPPXGGXXXPXRXGG----XPPKKXXXXXPPKXPPHPKXXXXGG 668
P PPPP G P GG PP P PP P GG
Sbjct: 280 PPPPPPLTGGMLPPPFGGHPAAAPPPPPLPAGVPAPPPPPPPPMLGG 326
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +3
Query: 513 GGXGXXXPHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHP 647
GG P PPPP G P G P PP PP P
Sbjct: 448 GGGPPQLPPNLPPPPGGMRGMPPPPMGMYPPPRGFPPPPFGPPPP 492
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHP 647
P+P PPP P PP PP PP P
Sbjct: 128 PNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPP 165
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHP 647
P P PPPP P PP PP PP+P
Sbjct: 176 PPPYPPPPNPPYPPPPNPP-YPPPPNAPNPPPPNPPYP 212
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHP 647
P P PPPP P PP PP PP+P
Sbjct: 163 PPPNPPPPNAPYPPPP----YPPPPNPPYPPPPNPPYP 196
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHP 647
P P PP P P PP PP PP+P
Sbjct: 96 PPPYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYP 133
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +3
Query: 540 PXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHP 647
P PPPP P PP PP PP+P
Sbjct: 123 PYPPPP-NPPYPPPPNAPYPPSPNAPYPPPPNPPYP 157
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHP 647
P P PPPP P PP PP P P
Sbjct: 105 PPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPP 142
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +3
Query: 513 GGXGXXXPHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPP 641
GG P P PPP GG P PP PP PP
Sbjct: 669 GGQAGGAPPPPPPPLPGGAAPP------PPPPIGGGAPPPPPP 705
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHPKXXXXG 665
P P PPPP GG + GG PP PP P G
Sbjct: 660 PPPPPPPPPGG-----QAGGAPPPPPPPLPGGAAPPPPPPIGGG 698
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +3
Query: 516 GXGXXXPHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHP 647
G G P P PPPP P PP PP PP P
Sbjct: 459 GVGQAPPPPPPPPPPPPPPPP------PPPPPPPPFPPPPPPTP 496
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 546 PPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPP 641
PPPP GG P PP PPK PP
Sbjct: 653 PPPPPGGGMFPPPP--PPPPGGGVPGPPKPPP 682
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHPKXXXXG 665
PHP PPP G P PP PP PHPK G
Sbjct: 567 PHPRVPPP--GAPHPRVP---PPGTPHPRVPPPGAPHPKVPPPG 605
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHPKXXXXG 665
PHP PPP G R G P + PP PHP+ G
Sbjct: 407 PHPRVPPP-GASHQRVRPPGAPHPR----VPPPGAPHPRFPPPG 445
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHPKXXXXG 665
PHP PPP G P PP PP PHP+ G
Sbjct: 427 PHPRVPPP--GAPHPR---FPPPGAPHPRVPPPGAPHPRVPPPG 465
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHPKXXXXG 665
PHP PPP G P PP PP PHP+ G
Sbjct: 447 PHPRVPPP--GAPHPR---VPPPGAPHPRVPPPGAPHPRVPPPG 485
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHPKXXXXG 665
PHP PPP G P PP PP PHP+ G
Sbjct: 457 PHPRVPPP--GAPHPR---VPPPGAPHPRVPPPGAPHPRVPPPG 495
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHPKXXXXG 665
PHP PPP G P PP PP PHP+ G
Sbjct: 507 PHPRVPPP--GAPHPR---VPPPGAPHPRVPPPGAPHPRVPPPG 545
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHPKXXXXG 665
PHP PPP G P PP PP PHP+ G
Sbjct: 517 PHPRVPPP--GAPHPR---VPPPGAPHPRVPPPGAPHPRVPPPG 555
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHPKXXXXG 665
PHP PPP G P PP PP PHP+ G
Sbjct: 537 PHPRVPPP--GAPHPR---VPPPGASHPRVPPPGAPHPRVPPPG 575
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHPKXXXXG 665
PHP PPP G P PP PP PHP+ G
Sbjct: 547 PHPRVPPP--GASHPR---VPPPGAPHPRVPPPGAPHPRVPPPG 585
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 28.7 bits (61), Expect = 6.7
Identities = 22/66 (33%), Positives = 22/66 (33%), Gaps = 3/66 (4%)
Frame = +3
Query: 480 GAXXXXXXXKXGGXGXXXPHPX---PPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHPK 650
GA K G P P PPPP G P R GG KK P PP K
Sbjct: 115 GAGPRGPALKPPGFRTTAPPPKNSSPPPPFGAPPPPDR-GGQLAKKPSQGSFPPPPPMGK 173
Query: 651 XXXXGG 668
G
Sbjct: 174 PPPPSG 179
>SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069)
Length = 135
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +3
Query: 522 GXXXPHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPP 641
G P P PP GG P G PP+ PP PP
Sbjct: 35 GGYPPAPGGYPPSGGYGYPPAGGYPPPQPGYAGGPP--PP 72
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +3
Query: 513 GGXGXXXPHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHPKXXXXGG 668
GG P PP P G P GG PP P P P+ GG
Sbjct: 20 GGYPPAAPGGYPPAPGG---YPPAPGGYPPSGGYGYPPAGGYPPPQPGYAGG 68
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHPKXXXXG 665
P P PPPP P PP PP PP P+ G
Sbjct: 696 PPPPPPPPLLSGTLPMPPPPPPPPPGCAGLPP-PPPSPQPGCAG 738
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPP 641
P P PPPP G P P PP PP
Sbjct: 712 PPPPPPPPPGCAGLPPPPPSPQPGCAGLPPPPPPPP 747
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 28.7 bits (61), Expect = 6.7
Identities = 22/66 (33%), Positives = 22/66 (33%), Gaps = 3/66 (4%)
Frame = +3
Query: 480 GAXXXXXXXKXGGXGXXXPHPX---PPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHPK 650
GA K G P P PPPP G P R GG KK P PP K
Sbjct: 27 GAGPRGPALKPPGFRTTAPPPKNSSPPPPFGAPPPPDR-GGQLAKKPSQGSFPPPPPMGK 85
Query: 651 XXXXGG 668
G
Sbjct: 86 PPPPSG 91
>SB_37025| Best HMM Match : Homeobox (HMM E-Value=1.3e-16)
Length = 154
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/47 (31%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
Frame = +3
Query: 534 PHPXPPP---PXGGXXXPXRXGGXPPKKXXXXXPPKXPPHPKXXXXG 665
P+P PPP P P + G PP PP P P G
Sbjct: 75 PYPGPPPALSPQVYRGYPFQYPGTPPPPMYPAFPPSFPSSPPPEYPG 121
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.141 0.461
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,529,397
Number of Sequences: 59808
Number of extensions: 152878
Number of successful extensions: 570
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 433
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2562198215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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