Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_C23
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 39 0.006
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 39 0.006
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 39 0.006
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.052
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.052
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.052
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 35 0.090
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 35 0.090
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 27 1.7
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 1.9
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 1.9
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 1.9
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.5
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 4.5
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 5.9
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 5.9
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 28 7.8
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 38.7 bits (86), Expect = 0.006
Identities = 20/52 (38%), Positives = 20/52 (38%)
Frame = +3
Query: 513 GGXGXXXPHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHPKXXXXGG 668
GG P PPPP GG P G PP PP PP P GG
Sbjct: 733 GGLPPITGGPPPPPPPGG-LPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 34.7 bits (76), Expect = 0.090
Identities = 26/87 (29%), Positives = 26/87 (29%), Gaps = 6/87 (6%)
Frame = +3
Query: 522 GXXXPHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHPKXXXXGGXXXXXXXXXXX 701
G P P PP GG P GG PP PP PP GG
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPP--ITGGPPPPPPPGGLPPISGGPPPPPPPPGGC 768
Query: 702 XXXXXXXXXGG------PPPPXGXXKP 764
GG PPPP G P
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPPGMFAP 795
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 38.7 bits (86), Expect = 0.006
Identities = 20/52 (38%), Positives = 20/52 (38%)
Frame = +3
Query: 513 GGXGXXXPHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHPKXXXXGG 668
GG P PPPP GG P G PP PP PP P GG
Sbjct: 733 GGLPPITGGPPPPPPPGG-LPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 34.7 bits (76), Expect = 0.090
Identities = 26/87 (29%), Positives = 26/87 (29%), Gaps = 6/87 (6%)
Frame = +3
Query: 522 GXXXPHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHPKXXXXGGXXXXXXXXXXX 701
G P P PP GG P GG PP PP PP GG
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPP--ITGGPPPPPPPGGLPPISGGPPPPPPPPGGC 768
Query: 702 XXXXXXXXXGG------PPPPXGXXKP 764
GG PPPP G P
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPPGMFAP 795
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 38.7 bits (86), Expect = 0.006
Identities = 20/52 (38%), Positives = 20/52 (38%)
Frame = +3
Query: 513 GGXGXXXPHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHPKXXXXGG 668
GG P PPPP GG P G PP PP PP P GG
Sbjct: 316 GGLPPITGGPPPPPPPGG-LPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Score = 34.7 bits (76), Expect = 0.090
Identities = 26/87 (29%), Positives = 26/87 (29%), Gaps = 6/87 (6%)
Frame = +3
Query: 522 GXXXPHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHPKXXXXGGXXXXXXXXXXX 701
G P P PP GG P GG PP PP PP GG
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPP--ITGGPPPPPPPGGLPPISGGPPPPPPPPGGC 351
Query: 702 XXXXXXXXXGG------PPPPXGXXKP 764
GG PPPP G P
Sbjct: 352 PPPPPPPPPGGFKGGPPPPPPPGMFAP 378
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.5 bits (78), Expect = 0.052
Identities = 21/74 (28%), Positives = 21/74 (28%), Gaps = 1/74 (1%)
Frame = +3
Query: 546 PPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHPKXXXXGG-XXXXXXXXXXXXXXXXXX 722
PPPP G P R G PP PP P G
Sbjct: 256 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 315
Query: 723 XXGGPPPPXGXXKP 764
GG PPP G P
Sbjct: 316 QAGGSPPPAGTGSP 329
Score = 28.3 bits (60), Expect = 7.8
Identities = 23/83 (27%), Positives = 23/83 (27%), Gaps = 6/83 (7%)
Frame = +3
Query: 516 GXGXXXPHPX---PPPPXGGXXXPXRXGGXPPKKXXXXXPP---KXPPHPKXXXXGGXXX 677
G G P P PPPP G P G PP PP P P G
Sbjct: 251 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPA-GGSPPPPRAGSPPPPPPPRGSPPT 309
Query: 678 XXXXXXXXXXXXXXXXXGGPPPP 746
G PPPP
Sbjct: 310 GSLPPPQAGGSPPPAGTGSPPPP 332
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.5 bits (78), Expect = 0.052
Identities = 21/74 (28%), Positives = 21/74 (28%), Gaps = 1/74 (1%)
Frame = +3
Query: 546 PPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHPKXXXXGG-XXXXXXXXXXXXXXXXXX 722
PPPP G P R G PP PP P G
Sbjct: 277 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 336
Query: 723 XXGGPPPPXGXXKP 764
GG PPP G P
Sbjct: 337 QAGGSPPPAGTGSP 350
Score = 28.3 bits (60), Expect = 7.8
Identities = 23/83 (27%), Positives = 23/83 (27%), Gaps = 6/83 (7%)
Frame = +3
Query: 516 GXGXXXPHPX---PPPPXGGXXXPXRXGGXPPKKXXXXXPP---KXPPHPKXXXXGGXXX 677
G G P P PPPP G P G PP PP P P G
Sbjct: 272 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPA-GGSPPPPRAGSPPPPPPPRGSPPT 330
Query: 678 XXXXXXXXXXXXXXXXXGGPPPP 746
G PPPP
Sbjct: 331 GSLPPPQAGGSPPPAGTGSPPPP 353
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.5 bits (78), Expect = 0.052
Identities = 21/74 (28%), Positives = 21/74 (28%), Gaps = 1/74 (1%)
Frame = +3
Query: 546 PPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPPHPKXXXXGG-XXXXXXXXXXXXXXXXXX 722
PPPP G P R G PP PP P G
Sbjct: 262 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 321
Query: 723 XXGGPPPPXGXXKP 764
GG PPP G P
Sbjct: 322 QAGGSPPPAGTGSP 335
Score = 28.3 bits (60), Expect = 7.8
Identities = 23/83 (27%), Positives = 23/83 (27%), Gaps = 6/83 (7%)
Frame = +3
Query: 516 GXGXXXPHPX---PPPPXGGXXXPXRXGGXPPKKXXXXXPP---KXPPHPKXXXXGGXXX 677
G G P P PPPP G P G PP PP P P G
Sbjct: 257 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPA-GGSPPPPRAGSPPPPPPPRGSPPT 315
Query: 678 XXXXXXXXXXXXXXXXXGGPPPP 746
G PPPP
Sbjct: 316 GSLPPPQAGGSPPPAGTGSPPPP 338
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 34.7 bits (76), Expect = 0.090
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +3
Query: 507 KXGGXGXXXPHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPP 641
+ G G P P PPPP P GG PP PP PP
Sbjct: 761 RGGPVGVGVP-PPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPP 804
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 34.7 bits (76), Expect = 0.090
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +3
Query: 507 KXGGXGXXXPHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPPKXPP 641
+ G G P P PPPP P GG PP PP PP
Sbjct: 761 RGGPVGVGVP-PPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPP 804
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 27.5 bits (58), Expect(2) = 1.7
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = +3
Query: 546 PPPPXGGXXX--PXRXGGXPPKKXXXXXPPKXPPHP 647
PPPP GG P G PP + PP PP P
Sbjct: 1573 PPPPRGGSHCQGPPPLMGGPPPR--LGMPPPGPPPP 1606
Score = 21.4 bits (43), Expect(2) = 1.7
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 732 GPPPPXGXXKP 764
GPPPP G P
Sbjct: 1602 GPPPPNGGPPP 1612
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 3/39 (7%)
Frame = +3
Query: 540 PXPPPPXGGXXXPXRXGGXPP---KKXXXXXPPKXPPHP 647
P PPPP GG G PP PP PP P
Sbjct: 216 PAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPP 254
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 3/39 (7%)
Frame = +3
Query: 540 PXPPPPXGGXXXPXRXGGXPP---KKXXXXXPPKXPPHP 647
P PPPP GG G PP PP PP P
Sbjct: 202 PAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPP 240
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 3/39 (7%)
Frame = +3
Query: 540 PXPPPPXGGXXXPXRXGGXPP---KKXXXXXPPKXPPHP 647
P PPPP GG G PP PP PP P
Sbjct: 202 PAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPP 240
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 514 PXFXGGGGGXAPKXXPPXPXGGGG 443
P GGG G AP PP P G GG
Sbjct: 20 PSGGGGGCGCAPPPPPPSPCGCGG 43
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 517 PPXFXGGGGGXAPKXXPPXPXGGG 446
PP GGGGG P P P GG
Sbjct: 798 PPGAPGGGGGMYPPLIPTRPGPGG 821
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 2/36 (5%)
Frame = +3
Query: 540 PXPPPPXGGXXXPX--RXGGXPPKKXXXXXPPKXPP 641
P PPP G P GG PP PP PP
Sbjct: 84 PPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPP 119
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 5/50 (10%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPP-----KXPPHPKXXXXGG 668
P P PPPP P G PP PP PP P GG
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 346
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2
Query: 502 GGGGGXAPKXXPPXPXGGG 446
GGGGG AP PP P GGG
Sbjct: 43 GGGGGCAP---PPAPCGGG 58
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2
Query: 502 GGGGGXAPKXXPPXPXGGG 446
GGGGG AP PP P GGG
Sbjct: 67 GGGGGCAP---PPAPCGGG 82
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2
Query: 502 GGGGGXAPKXXPPXPXGGG 446
GGGGG AP PP P GGG
Sbjct: 43 GGGGGCAP---PPAPCGGG 58
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2
Query: 502 GGGGGXAPKXXPPXPXGGG 446
GGGGG AP PP P GGG
Sbjct: 67 GGGGGCAP---PPAPCGGG 82
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 5/50 (10%)
Frame = +3
Query: 534 PHPXPPPPXGGXXXPXRXGGXPPKKXXXXXPP-----KXPPHPKXXXXGG 668
P P PPPP P G PP PP PP P GG
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 356
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 517 PPXFXGGGGGXAPKXXPPXPXGGG 446
PP GGGGG P P P GG
Sbjct: 798 PPGAPGGGGGMYPPLIPTRPGPGG 821
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 513 GGXGXXXPHPXPPPPXGGXXXPXRXGGXPP 602
GG G P P PPPP G PP
Sbjct: 667 GGLGGFMPPPPPPPPMPGDLSSLLAAAPPP 696
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 513 GGXGXXXPHPXPPPPXGGXXXPXRXGGXPP 602
GG G P P PPPP G PP
Sbjct: 667 GGLGGFMPPPPPPPPMPGDLSSLLAAAPPP 696
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 502 GGGGGXAPKXXPPXPXGGG 446
GGGGG PP P GGG
Sbjct: 22 GGGGGGCCAPPPPPPCGGG 40
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.141 0.461
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,114,749
Number of Sequences: 27780
Number of extensions: 154034
Number of successful extensions: 806
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 676
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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