Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_C22
(890 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 134 2e-30
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 133 7e-30
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 116 8e-25
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 113 8e-24
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 112 1e-23
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 103 8e-21
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 100 1e-19
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 98 2e-19
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 98 3e-19
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 98 3e-19
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 95 3e-18
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 95 3e-18
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 94 4e-18
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 92 2e-17
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 91 5e-17
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 89 1e-16
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 89 1e-16
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 88 2e-16
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 75 3e-12
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 74 6e-12
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 66 1e-09
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 61 3e-08
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 59 1e-07
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 54 4e-06
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 53 1e-05
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 52 3e-05
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 51 3e-05
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 50 6e-05
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 49 1e-04
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 49 2e-04
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 48 4e-04
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 45 0.002
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 42 0.016
UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole gen... 42 0.021
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 42 0.028
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 40 0.085
UniRef50_A7F9H5 Cluster: Putative uncharacterized protein; n=1; ... 37 0.79
UniRef50_A6SHQ7 Cluster: Putative uncharacterized protein; n=1; ... 37 0.79
UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein DKFZp4... 36 1.0
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 36 1.4
UniRef50_A6FXV5 Cluster: Putative uncharacterized protein; n=1; ... 36 1.8
UniRef50_A3YC61 Cluster: Ornithine cyclodeaminase; n=1; Marinomo... 35 2.4
UniRef50_Q4RK83 Cluster: Chromosome 2 SCAF15032, whole genome sh... 35 3.2
UniRef50_Q15911 Cluster: Zinc finger homeobox protein 3; n=25; A... 35 3.2
UniRef50_UPI0000F2E191 Cluster: PREDICTED: hypothetical protein;... 34 4.2
UniRef50_Q021H3 Cluster: Peptidase M61 domain protein precursor;... 34 5.6
UniRef50_A0H7D7 Cluster: Cytochrome c, class I; n=4; Comamonadac... 34 5.6
UniRef50_Q75LF8 Cluster: Putative uncharacterized protein OSJNBb... 34 5.6
UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole gen... 34 5.6
UniRef50_Q6PEV8 Cluster: Uncharacterized protein CXorf39; n=19; ... 34 5.6
UniRef50_Q6ZQU4 Cluster: CDNA FLJ46885 fis, clone UTERU3016274; ... 33 7.4
UniRef50_A2QMQ0 Cluster: Contig An07c0080, complete genome; n=11... 33 7.4
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 134 bits (325), Expect = 2e-30
Identities = 64/137 (46%), Positives = 84/137 (61%)
Frame = +3
Query: 408 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 587
AFGNMCRGGRMFAPTK +RRWH Q++GH+I+ + E
Sbjct: 94 AFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHVIDGVSEF 153
Query: 588 PLVVADKVQEINKTKQAVIFLRRLKAWSDILKGVQVSASSCW*G*NAQPSSYQRKGPLII 767
PLVV+D+VQ++ KTKQAVIFLRRLK W+DI K + G R+GPL++
Sbjct: 154 PLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLVV 213
Query: 768 FNKDQGLTRAFRXIPGV 818
++KD+GL +AFR IPG+
Sbjct: 214 YDKDEGLRKAFRNIPGI 230
Score = 125 bits (302), Expect = 1e-27
Identities = 63/94 (67%), Positives = 73/94 (77%)
Frame = +2
Query: 125 MSLSVARPLXVGVFREERDGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 304
MSL ARPL V V+ E+ + A + VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPL-VSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSE 59
Query: 305 EAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 406
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG
Sbjct: 60 LAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 93
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 133 bits (321), Expect = 7e-30
Identities = 64/137 (46%), Positives = 80/137 (58%)
Frame = +3
Query: 408 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 587
AFGNMCRGGRMFAPTK WRRWH ++GH IE++PEL
Sbjct: 91 AFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPEL 150
Query: 588 PLVVADKVQEINKTKQAVIFLRRLKAWSDILKGVQVSASSCW*G*NAQPSSYQRKGPLII 767
PLVV DKV+ KTK+AV+ L++LKAW+DI K G QR+GP II
Sbjct: 151 PLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCII 210
Query: 768 FNKDQGLTRAFRXIPGV 818
+N+D G+ +AFR IPG+
Sbjct: 211 YNEDNGIIKAFRNIPGI 227
Score = 126 bits (305), Expect = 6e-28
Identities = 61/92 (66%), Positives = 74/92 (80%)
Frame = +2
Query: 131 LSVARPLXVGVFREERDGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 310
++ ARPL + V+ E+ + +G + VFKAPIRPD+VN VH ++ KN+RQPY VS+ A
Sbjct: 1 MACARPL-ISVYSEKGESSGKNVTLPA-VFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 58
Query: 311 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 406
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQG
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 90
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 116 bits (279), Expect = 8e-25
Identities = 52/64 (81%), Positives = 57/64 (89%)
Frame = +2
Query: 215 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 394
VF+AP+RPD+V+ VH + KN RQPY VS EAGHQTSAESWGTGRAVARIPRVRGGGTHR
Sbjct: 144 VFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAESWGTGRAVARIPRVRGGGTHR 203
Query: 395 SGQG 406
SGQG
Sbjct: 204 SGQG 207
Score = 51.6 bits (118), Expect = 3e-05
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +3
Query: 408 AFGNMCRGGRMFAPTKPWRRWH 473
AFGNMCRGGRMFAPTK +RRWH
Sbjct: 208 AFGNMCRGGRMFAPTKVFRRWH 229
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 113 bits (271), Expect = 8e-24
Identities = 53/88 (60%), Positives = 66/88 (75%)
Frame = +3
Query: 555 RGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKGVQVSASSCW*G*NAQP 734
RG++++ + E+PLVV+DK+QEINKTKQAVIFLRR+KAWSD+LK + G
Sbjct: 5 RGYVVDNVSEIPLVVSDKIQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNR 64
Query: 735 SSYQRKGPLIIFNKDQGLTRAFRXIPGV 818
RKGPLII+NKDQGLTR+FR IPGV
Sbjct: 65 RRLHRKGPLIIYNKDQGLTRSFRNIPGV 92
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 112 bits (269), Expect = 1e-23
Identities = 49/63 (77%), Positives = 55/63 (87%)
Frame = +2
Query: 215 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 394
VF +PIRPD+V VH M+KN RQPY VS++AGHQTSAESWGTGRAVARIPRV GGGTHR
Sbjct: 26 VFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQTSAESWGTGRAVARIPRVSGGGTHR 85
Query: 395 SGQ 403
+GQ
Sbjct: 86 AGQ 88
Score = 81.0 bits (191), Expect = 4e-14
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Frame = +3
Query: 408 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 587
AFGNMCR GRMFAPTK WR+WH ARGH I ++ E+
Sbjct: 90 AFGNMCRSGRMFAPTKVWRKWHQKINLGQKRFATVSALAASGVPALLFARGHQISEVAEV 149
Query: 588 PLVVADKVQE---INKTKQAVIFLRRLKAWSDILKGVQVSASSCW*G*NAQPSSYQRKGP 758
PLV+ +V E I +T A L+ + A D+ K G QR+GP
Sbjct: 150 PLVINSEVFEGAKIARTAAAAGLLKTVGALKDVEKVKDSRKLRAGKGKLRGRRHRQRRGP 209
Query: 759 LIIFN---KDQGLTRAFRXIPGV 818
L++++ + L RAFR +PGV
Sbjct: 210 LVVYDGATDGKELVRAFRNLPGV 232
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 103 bits (246), Expect = 8e-21
Identities = 50/77 (64%), Positives = 58/77 (75%)
Frame = +2
Query: 173 ERDGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRA 352
ER GA P VF AP+R DLV VH +MSKN RQ Y VSK +G+QTSA SWGTGRA
Sbjct: 16 ERVGATLMPK----VFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTSARSWGTGRA 71
Query: 353 VARIPRVRGGGTHRSGQ 403
+AR+PRV+GGGTHR+GQ
Sbjct: 72 MARVPRVKGGGTHRAGQ 88
Score = 77.4 bits (182), Expect = 5e-13
Identities = 50/139 (35%), Positives = 66/139 (47%), Gaps = 2/139 (1%)
Frame = +3
Query: 408 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 587
A+ N CR G M+APT+ WRRWH +RGH IE + E+
Sbjct: 90 AYANFCRAGGMYAPTRVWRRWHRKVNLKEKRQALASALAATAVVPVVMSRGHRIEALREV 149
Query: 588 PLVVADKVQEINKTKQAVIFLRRLKAWSDILKGVQVSASSCW*G*NAQPSSYQRKGPLII 767
P+VV D +++INKTK AV L + ++ LK + G +P GPLII
Sbjct: 150 PMVVDDAIEQINKTKDAVKLLETIGLGAE-LKRIDKVTGRARDGRKKRP-----VGPLII 203
Query: 768 FNKD--QGLTRAFRXIPGV 818
+G RAFR IPGV
Sbjct: 204 LRATAVEG-KRAFRNIPGV 221
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 99.5 bits (237), Expect = 1e-19
Identities = 52/92 (56%), Positives = 65/92 (70%), Gaps = 3/92 (3%)
Frame = +2
Query: 137 VARPLXVGVFR---EERDGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 307
V RP+ V VF E+R G+ P VF P+R DLV+ VH +MSKN RQ Y +S+
Sbjct: 2 VHRPV-VSVFSVSTEKRMGSTIMPR----VFSTPLRSDLVHYVHTNMSKNKRQAYAISRM 56
Query: 308 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 403
+G+QTSA SWGTGRA++R PRV+GGGTHRSGQ
Sbjct: 57 SGYQTSARSWGTGRALSRTPRVKGGGTHRSGQ 88
Score = 77.4 bits (182), Expect = 5e-13
Identities = 47/139 (33%), Positives = 66/139 (47%), Gaps = 2/139 (1%)
Frame = +3
Query: 408 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 587
A+ N CR G MFAPT+ WR WH +RGH +E +PEL
Sbjct: 90 AYANFCRAGGMFAPTRTWRHWHRKINLKEKRLALAVSVAATASVPLVMSRGHRVESVPEL 149
Query: 588 PLVVADKVQEINKTKQAVIFLRRLKAWSDILKGVQVSASSCW*G*NAQPSSYQRKGPLII 767
PLV+ D ++ + KT+ AV L + +D LK V V+ + + + GPL++
Sbjct: 150 PLVLDDTMETLTKTRDAVELLNSM-GLADELKRVSVTKRT------KRKGKKRPVGPLVV 202
Query: 768 FNKD--QGLTRAFRXIPGV 818
+G RAFR IPGV
Sbjct: 203 MRSTAVEG-KRAFRNIPGV 220
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 98.3 bits (234), Expect = 2e-19
Identities = 52/138 (37%), Positives = 68/138 (49%), Gaps = 1/138 (0%)
Frame = +3
Query: 408 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 587
AFGN CR GRM P K WRRWH ARGH I ++P++
Sbjct: 92 AFGNQCRKGRMSLPIKVWRRWHRRVNIKQKRHAAATAVAATGIVPLVLARGHRISQVPQI 151
Query: 588 PLVVADKVQEINKTKQAVIFLRRLKAWSDILKGVQVSASSCW*G*NAQPSSYQRKGPLII 767
PLVV DK++ KT A+ FL+R A+ D+ K V RKGPL++
Sbjct: 152 PLVVEDKIESYEKTTDALNFLKRFGAFEDVQKVVSTKVVRAGISKQRGKKYRVRKGPLVV 211
Query: 768 -FNKDQGLTRAFRXIPGV 818
FN++ L +AFR +PGV
Sbjct: 212 YFNENAKLLKAFRNVPGV 229
Score = 96.3 bits (229), Expect = 9e-19
Identities = 44/67 (65%), Positives = 53/67 (79%)
Frame = +2
Query: 203 PSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGG 382
P VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q SAESWGTGRAVARIPRV G
Sbjct: 24 PLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHSAESWGTGRAVARIPRVSGS 83
Query: 383 GTHRSGQ 403
GTHRSGQ
Sbjct: 84 GTHRSGQ 90
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 97.9 bits (233), Expect = 3e-19
Identities = 53/137 (38%), Positives = 69/137 (50%)
Frame = +3
Query: 408 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 587
AF N RGG M++P K WRRWH ARGH I+ +PEL
Sbjct: 91 AFANSARGGHMYSPLKVWRRWHRMVNVTQRRFAMCSAIAASSNPSLVLARGHKIDNVPEL 150
Query: 588 PLVVADKVQEINKTKQAVIFLRRLKAWSDILKGVQVSASSCW*G*NAQPSSYQRKGPLII 767
PLVV+D V++I KTK+AV L LKA D+ + G QR+G LI+
Sbjct: 151 PLVVSDDVEQIKKTKEAVKVLAALKASDDVKHSAESKRIRVGSGKARNRRYTQRRGVLIV 210
Query: 768 FNKDQGLTRAFRXIPGV 818
++++GL AFR I GV
Sbjct: 211 HDQNEGLANAFRNISGV 227
Score = 87.0 bits (206), Expect = 6e-16
Identities = 38/60 (63%), Positives = 49/60 (81%)
Frame = +2
Query: 224 APIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 403
+PIRPD+V+ VH++++KN RQP+ AGHQ SAESWGTGRAVAR+PR+ G GT R+GQ
Sbjct: 30 SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAESWGTGRAVARVPRISGSGTSRNGQ 89
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 97.9 bits (233), Expect = 3e-19
Identities = 52/92 (56%), Positives = 59/92 (64%)
Frame = +2
Query: 131 LSVARPLXVGVFREERDGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 310
++ ARP+ V VF P VF +P+R DLV V +MSKN RQ Y VS +A
Sbjct: 1 MTFARPI-VSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKA 59
Query: 311 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 406
GHQ SAESWGTGRAVARIPRV GT RSGQG
Sbjct: 60 GHQHSAESWGTGRAVARIPRVSASGTSRSGQG 91
Score = 93.5 bits (222), Expect = 7e-18
Identities = 51/139 (36%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
Frame = +3
Query: 408 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 587
AFGNMCRGG MF+P K +RR+H ARGH I +PEL
Sbjct: 92 AFGNMCRGGHMFSPNKTYRRFHRKINTTEKRHAVAAAIAATGCPSLVMARGHRINNVPEL 151
Query: 588 PLVVADKVQEINKTKQAVIFLRRL-KAWSDILKGVQVS-ASSCW*G*NAQPSSYQRKGPL 761
PLV+++++Q INKT AV F + K + +K ++ S A C G GPL
Sbjct: 152 PLVISNEIQNINKTSTAVEFFKNFGKGLEEEMKRIESSIAIRCGKGKMRNRRRVCAVGPL 211
Query: 762 IIFNKDQGLTRAFRXIPGV 818
+++ +D G+ +A R I GV
Sbjct: 212 VVYAEDNGIVKAMRNIKGV 230
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 94.7 bits (225), Expect = 3e-18
Identities = 43/63 (68%), Positives = 50/63 (79%)
Frame = +2
Query: 215 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 394
VF+ PIR DL+ + +MSKN R PY V AG++TSAESWGTGRAVARIPRV GGGTHR
Sbjct: 27 VFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAGYETSAESWGTGRAVARIPRVPGGGTHR 86
Query: 395 SGQ 403
+GQ
Sbjct: 87 AGQ 89
Score = 87.8 bits (208), Expect = 3e-16
Identities = 49/137 (35%), Positives = 66/137 (48%)
Frame = +3
Query: 408 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 587
AFGNMCRGG MF PTK WRRW ARGH I + E+
Sbjct: 91 AFGNMCRGGGMFNPTKIWRRWGRKINLKEKRYAVCSSIAASGITSLVLARGHRISNLKEV 150
Query: 588 PLVVADKVQEINKTKQAVIFLRRLKAWSDILKGVQVSASSCW*G*NAQPSSYQRKGPLII 767
PLV ++ ++ + KTK A+ FL L ++ + ++ G GPLII
Sbjct: 151 PLVASNDIESMQKTKDALKFLISLGLRDEVNRLIKSXKLRARXGKMRNRKYKISNGPLII 210
Query: 768 FNKDQGLTRAFRXIPGV 818
++ D G+ +AFR IPGV
Sbjct: 211 YSXDSGIKKAFRNIPGV 227
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 94.7 bits (225), Expect = 3e-18
Identities = 47/137 (34%), Positives = 72/137 (52%)
Frame = +3
Query: 408 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 587
A+ N CRGG F P RRW QARGH++ ++ E+
Sbjct: 88 AYANFCRGGHRFNPPTLLRRWFRPVPSRQRKFAIASAIAATAVVPLVQARGHVLGEVKEV 147
Query: 588 PLVVADKVQEINKTKQAVIFLRRLKAWSDILKGVQVSASSCW*G*NAQPSSYQRKGPLII 767
P+VV D VQEI +T+ AV L+++ + D+ + + S G + + +KGPL+I
Sbjct: 148 PIVVVDAVQEIKRTRDAVELLKKVGVYGDVQRVLDGSVHRSSKGKFRRAAYKTKKGPLVI 207
Query: 768 FNKDQGLTRAFRXIPGV 818
+N+D+G+ +AFR IPGV
Sbjct: 208 YNEDKGIVKAFRNIPGV 224
Score = 76.6 bits (180), Expect = 8e-13
Identities = 38/84 (45%), Positives = 54/84 (64%)
Frame = +2
Query: 155 VGVFREERDGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 334
V V +E A P VF PIR ++V +V+V+++KN++QP+ AG + SA S
Sbjct: 6 VNVLTQEGQKASTIELPK--VFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKKVSAIS 63
Query: 335 WGTGRAVARIPRVRGGGTHRSGQG 406
WGTGRA A +PRV G G++R+GQG
Sbjct: 64 WGTGRAKACVPRVNGSGSNRNGQG 87
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 94.3 bits (224), Expect = 4e-18
Identities = 52/137 (37%), Positives = 70/137 (51%)
Frame = +3
Query: 408 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 587
AFGNMCRGGRMFAPTK +RRWH +RGH I +PE+
Sbjct: 90 AFGNMCRGGRMFAPTKIFRRWHRKINLHQKRFAVVSALAASSVPSLVMSRGHQIGNVPEV 149
Query: 588 PLVVADKVQEINKTKQAVIFLRRLKAWSDILKGVQVSASSCW*G*NAQPSSYQRKGPLII 767
PLVV D +Q KTK+A+ FL+ + A D+ + G R+GP+++
Sbjct: 150 PLVVEDSIQGYEKTKEAMAFLKAIAAIDDVNRVNDSREIRAGRGKMRNRRYVARRGPMLV 209
Query: 768 FNKDQGLTRAFRXIPGV 818
++G TRAFR I G+
Sbjct: 210 MPNNKG-TRAFRNIFGL 225
Score = 92.3 bits (219), Expect = 2e-17
Identities = 50/90 (55%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Frame = +2
Query: 140 ARPLXVGVFREERDGA-GXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGH 316
ARP V V+ D G P P+ VF APIR D+V VH +M+KNSRQ Y V++ +G
Sbjct: 3 ARP-SVSVYSASSDSVVGTCPLPA--VFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGM 59
Query: 317 QTSAESWGTGRAVARIPRVRGGGTHRSGQG 406
SA SWGTGRAVARIPR+ GGGT SG G
Sbjct: 60 NHSAHSWGTGRAVARIPRISGGGTSTSGAG 89
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 92.3 bits (219), Expect = 2e-17
Identities = 54/143 (37%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Frame = +3
Query: 408 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 587
AFGNMCR GRMFAPTK WR+WH ARGH + +PE+
Sbjct: 67 AFGNMCRSGRMFAPTKVWRKWHQKINLNQKRFATASALAASGSPALLMARGHNVSTVPEV 126
Query: 588 PLVVADKV---QEINKTKQAVIFLRRLKAWSDILKGVQVSASSCW*G*NAQPSSYQRKGP 758
PLV++ I KT AV L+ + A +D K G QR+GP
Sbjct: 127 PLVISSTAFADAAIRKTSAAVALLKAVGAGADCEKAKNSRKLRAGKGKLRGRRHKQRRGP 186
Query: 759 LIIFNKDQG---LTRAFRXIPGV 818
L+I+N D+ L +AFR IPGV
Sbjct: 187 LVIYNPDEDGKELVKAFRNIPGV 209
Score = 71.7 bits (168), Expect = 2e-11
Identities = 31/44 (70%), Positives = 37/44 (84%)
Frame = +2
Query: 272 KNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 403
++++ V +AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ
Sbjct: 22 ESTKDTLTVPNKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQ 65
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 90.6 bits (215), Expect = 5e-17
Identities = 52/139 (37%), Positives = 70/139 (50%), Gaps = 2/139 (1%)
Frame = +3
Query: 408 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 587
AFGNM R G MF+P K +R+W ARGH I +P++
Sbjct: 91 AFGNMTRKGHMFSPLKNFRKWQRKTPKQMRRFAVASCIAASAVPALVSARGHHIAGVPQI 150
Query: 588 PLVVADK-VQEINKTKQAVIFLRRLKAWSDILKGVQVSASSCW*G*NAQPSSYQRKGPLI 764
PLVV K + I KTKQAV L+++ A+SD+LK + G +RKGPL+
Sbjct: 151 PLVVNSKSISVIKKTKQAVYLLKKINAYSDVLKVIASKTVRAGQGKMRGRKIKERKGPLV 210
Query: 765 IF-NKDQGLTRAFRXIPGV 818
++ N D +AFR IPGV
Sbjct: 211 VYGNDDLQAVKAFRNIPGV 229
Score = 83.8 bits (198), Expect = 5e-15
Identities = 41/64 (64%), Positives = 50/64 (78%)
Frame = +2
Query: 215 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 394
VF APIR D+V+ V+ + SKN+RQP VS +AG Q SA SWGTGRAVARIPR+ G G+ R
Sbjct: 27 VFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQHSAISWGTGRAVARIPRISGSGSGR 86
Query: 395 SGQG 406
+GQG
Sbjct: 87 NGQG 90
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 89.4 bits (212), Expect = 1e-16
Identities = 57/168 (33%), Positives = 75/168 (44%)
Frame = +3
Query: 315 TKPVPNHGVPDVLSPEFLXXXXXXPIGPVRXAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 494
TKP P+ G P S F P PV+ G + WRRWH
Sbjct: 71 TKPRPSPGAPVARSLVFRVCRAVVPTAPVK--------GRSVTCAAVTWRRWHRRVNIKE 122
Query: 495 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSD 674
ARGH +E +PE+PLVV D I KT +AV L++L A++D
Sbjct: 123 KRYAVCSAIAASAVPSLLLARGHRVEGVPEVPLVVDDSASSIKKTAKAVELLKQLGAYAD 182
Query: 675 ILKGVQVSASSCW*G*NAQPSSYQRKGPLIIFNKDQGLTRAFRXIPGV 818
I K G QR+GPL+++++D G+TRAFR IPGV
Sbjct: 183 IEKVKASRNVRSGKGKMRNRRYVQRRGPLVVYSEDNGVTRAFRNIPGV 230
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 89.4 bits (212), Expect = 1e-16
Identities = 41/64 (64%), Positives = 47/64 (73%)
Frame = +2
Query: 215 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 394
VF PIR DLV + +RQPY VSK AG Q SAESWGTGRA+AR+PRV+GGGT R
Sbjct: 24 VFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAESWGTGRAIARVPRVKGGGTRR 83
Query: 395 SGQG 406
+GQG
Sbjct: 84 AGQG 87
Score = 68.1 bits (159), Expect = 3e-10
Identities = 44/137 (32%), Positives = 58/137 (42%)
Frame = +3
Query: 408 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 587
AF N CR GRM PTK RRW +ARGH I + L
Sbjct: 88 AFANFCRKGRMAHPTKTHRRWARKVVENTKKIAEAMAVAASAQASLVEARGHRISDVKML 147
Query: 588 PLVVADKVQEINKTKQAVIFLRRLKAWSDILKGVQVSASSCW*G*NAQPSSYQRKGPLII 767
P++V+D + + KTK AV LR L ++ + + C G QRKG LI+
Sbjct: 148 PIIVSDDIAKARKTKDAVEILRNLNMTEELKRVEKSRGVRCGKGKMRNRRYTQRKGILIV 207
Query: 768 FNKDQGLTRAFRXIPGV 818
+ + FR I GV
Sbjct: 208 HGESSEML-GFRNIRGV 223
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 88.2 bits (209), Expect = 2e-16
Identities = 42/66 (63%), Positives = 48/66 (72%)
Frame = +2
Query: 215 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 394
VF + IR D+V VH +M KN RQ Y VS AG TSA SWGTGRAV+R+PRV G GTHR
Sbjct: 22 VFFSKIRVDIVRFVHKNMCKNKRQVYAVSSTAGMGTSAVSWGTGRAVSRVPRVPGSGTHR 81
Query: 395 SGQGCL 412
SGQG +
Sbjct: 82 SGQGAI 87
Score = 60.5 bits (140), Expect = 6e-08
Identities = 27/84 (32%), Positives = 40/84 (47%)
Frame = +3
Query: 408 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 587
A N CRGGR+F PT WR+WH +RG+ ++ IPE+
Sbjct: 86 AIANFCRGGRIFNPTTIWRKWHHKINKNQRKSAIFSAIASSSIVSIIVSRGYRVKTIPEI 145
Query: 588 PLVVADKVQEINKTKQAVIFLRRL 659
P V+ D +++I KT+ + L L
Sbjct: 146 PFVIEDSIEKIPKTRDLIKILTTL 169
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 74.5 bits (175), Expect = 3e-12
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +2
Query: 239 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 385
D+VN VH ++ KN QPY VS+ AG+QTSAESWGTGRA +PRVRGGG
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTSAESWGTGRARGPMPRVRGGG 73
Score = 47.2 bits (107), Expect = 6e-04
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +3
Query: 606 KVQEINKTKQAVIFLRRLKAWSDILKGVQVSASSCW*G*NAQPSSYQRKGPLIIFNKDQG 785
KV+ KTK+ V+ L++LKAW+DI K G QR+G II+N+D G
Sbjct: 98 KVEGYKKTKEEVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRPIQRRGSCIIYNEDNG 157
Query: 786 LTRA 797
+ +A
Sbjct: 158 IIKA 161
Score = 43.6 bits (98), Expect = 0.007
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +1
Query: 682 KVYKSQRLRAGKGKMRNRRRISVRG 756
KVY SQR+RAGKGKMRNRR I RG
Sbjct: 123 KVYASQRMRAGKGKMRNRRPIQRRG 147
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 73.7 bits (173), Expect = 6e-12
Identities = 33/60 (55%), Positives = 40/60 (66%)
Frame = +2
Query: 203 PSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGG 382
P VF P+RPD++N VH + K R PY VS+ AG Q +A SWG GRAVAR+PR GG
Sbjct: 19 PRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQCTAHSWGPGRAVARLPRKHGG 78
Score = 60.9 bits (141), Expect = 4e-08
Identities = 40/137 (29%), Positives = 56/137 (40%)
Frame = +3
Query: 408 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 587
A+ N RGG M PT RRW +ARGH I +P +
Sbjct: 81 AYANFARGGHMAHPTTVIRRWCRKVNLNQRRYAVASALAASANAALVEARGHRIADVPSI 140
Query: 588 PLVVADKVQEINKTKQAVIFLRRLKAWSDILKGVQVSASSCW*G*NAQPSSYQRKGPLII 767
PLVV + KTK A+ ++ + D+ + G RKGPL+I
Sbjct: 141 PLVV--DTDNVTKTKDALAIIKAVGVLRDVERCKDSRHIRAGRGKMRNRRYITRKGPLVI 198
Query: 768 FNKDQGLTRAFRXIPGV 818
+N + + R FR +PGV
Sbjct: 199 YNTED-VARGFRNLPGV 214
Score = 34.7 bits (76), Expect = 3.2
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +1
Query: 694 SQRLRAGKGKMRNRRRISVRGP 759
S+ +RAG+GKMRNRR I+ +GP
Sbjct: 174 SRHIRAGRGKMRNRRYITRKGP 195
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 65.7 bits (153), Expect = 1e-09
Identities = 36/90 (40%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = +3
Query: 552 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKGVQVSASSCW*G*NAQ 731
ARGH IE +PELPLV+ D + + KT A+ L++ A+ D K A G
Sbjct: 2 ARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQFDAYLDTEKAKDSHAIHPGKGKMRN 61
Query: 732 PSSYQRKGPLIIFNKDQG-LTRAFRXIPGV 818
RKGPLI++ + L +AFR IPGV
Sbjct: 62 RRYISRKGPLIVYGMEGAKLVKAFRNIPGV 91
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 61.3 bits (142), Expect = 3e-08
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = +2
Query: 218 FKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRG 379
F+ P+R DL+ ++ N RQPY AG +TSAESWG G VA +PRV+G
Sbjct: 22 FEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSAESWGAGHGVAMVPRVKG 75
Score = 53.2 bits (122), Expect = 9e-06
Identities = 25/88 (28%), Positives = 46/88 (52%)
Frame = +3
Query: 555 RGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKGVQVSASSCW*G*NAQP 734
RGH+I+ +P LP+VV D+++ +NK ++ F + + W+D+ + G
Sbjct: 134 RGHVIDDVPHLPVVVVDELKSLNKAREVREFFKSVGLWADVERAKSNRRIRAGKGKRRGR 193
Query: 735 SSYQRKGPLIIFNKDQGLTRAFRXIPGV 818
+ K LI+ ++D+G+ R PGV
Sbjct: 194 RYVKPKSVLIVVDEDEGIKLGARNHPGV 221
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 59.3 bits (137), Expect = 1e-07
Identities = 25/44 (56%), Positives = 36/44 (81%)
Frame = +3
Query: 552 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILK 683
++GH I ++PELPLVV DKV+ KT++AV+ L++LKAW+DI K
Sbjct: 2 SKGHRIGEVPELPLVVEDKVEGYKKTEEAVLLLKKLKAWNDIKK 45
Score = 40.7 bits (91), Expect = 0.049
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +1
Query: 682 KVYKSQRLRAGKGKMRNRRRISVRGPS*SSTRIRV*HAPSAXS 810
KVY SQR+RAGKGKMRN S P+ S+ + V PS S
Sbjct: 45 KVYASQRMRAGKGKMRNPLASSAGDPASSTMKTTVSSRPSETS 87
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 54.4 bits (125), Expect = 4e-06
Identities = 21/35 (60%), Positives = 29/35 (82%)
Frame = +2
Query: 308 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGCL 412
+G+Q SA+SWG GR +ARIPR++G GT ++GQG L
Sbjct: 59 SGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGAL 93
Score = 38.7 bits (86), Expect = 0.20
Identities = 26/123 (21%), Positives = 50/123 (40%)
Frame = +3
Query: 408 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 587
A NMCRGGR+F ++W+ +RGH ++ +
Sbjct: 92 ALANMCRGGRLFGNRNYSKKWNIKTNRKVKVSAFKTALLSTLFETLVVSRGHSLKDVKNF 151
Query: 588 PLVVADKVQEINKTKQAVIFLRRLKAWSDILKGVQVSASSCW*G*NAQPSSYQRKGPLII 767
P+++ ++ I + ++ L+ +SD K + A + S+ + GPLII
Sbjct: 152 PMIIDSILKYIWHPSELLMLLKLYGGYSDFKKAMISHAKR---KKHLASSNTCKNGPLII 208
Query: 768 FNK 776
++
Sbjct: 209 VDQ 211
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 52.8 bits (121), Expect = 1e-05
Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Frame = +3
Query: 402 RXAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIP 581
R F RGGR P K ++ H ARGH++EK+P
Sbjct: 106 RGCFAPNTRGGRRAHPPKVEKKLHEEINKKEKKLAIRSAIAATAYRSWVAARGHVVEKVP 165
Query: 582 ELPLVVADKVQEINKTKQAVIFLRRLKAWSDI---LKGVQVSA 701
LP+VV ++IN+ K+A L W D+ +GV++ A
Sbjct: 166 SLPVVVVGDAEKINRAKEAKKLFEALGLWPDVERAAEGVKIRA 208
Score = 50.0 bits (114), Expect = 8e-05
Identities = 27/67 (40%), Positives = 36/67 (53%)
Frame = +2
Query: 179 DGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVA 358
DGA + F PIRPDL+ ++S QP V + AG + S ES+G G +A
Sbjct: 35 DGAYVADIEAPLHFLEPIRPDLIRRAYLSALSARFQPKGVYEGAGKEHSCESFGVGLGIA 94
Query: 359 RIPRVRG 379
RIPR +G
Sbjct: 95 RIPRYKG 101
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 51.6 bits (118), Expect = 3e-05
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +3
Query: 597 VADKVQEINKTKQAVIFLRRLKAWSDILKGVQVSASSCW*G*NAQPSSYQRKGPLII-FN 773
V DK++ KTK A+ FL+R A+ D+ K V + RKGPL++ FN
Sbjct: 1 VEDKIESYEKTKDALNFLKRFGAFEDVQKVVSTKTIRAGVSKSRGKKYRVRKGPLVVYFN 60
Query: 774 KDQGLTRAFRXIPGV 818
++ L +AFR +PGV
Sbjct: 61 ENAKLLKAFRNVPGV 75
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 51.2 bits (117), Expect = 3e-05
Identities = 25/71 (35%), Positives = 39/71 (54%)
Frame = +2
Query: 173 ERDGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRA 352
++DG + +F P+R DL+ V ++ +S QP AG +TSAES+G
Sbjct: 14 DKDGNRIKEVELPIIFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTSAESFGINLG 73
Query: 353 VARIPRVRGGG 385
+AR+PRV+ G
Sbjct: 74 MARVPRVKNSG 84
Score = 34.7 bits (76), Expect = 3.2
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +3
Query: 549 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKGVQVSASSCW*G*NA 728
+ARGH+ + P+VV D + + T + FL+++ + D+ + + G
Sbjct: 134 RARGHVFKDSVRFPIVVTDDIVNLKTTSEVEEFLKKIGVYDDVERVKERIRIRAGKGKMR 193
Query: 729 QPSSYQRKGPLII-FNKDQGLTRAFRXIPGV 818
+ GPLII + + + +A R + GV
Sbjct: 194 GRKYKEPIGPLIIVHDSNSPIIKAARNLAGV 224
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 50.4 bits (115), Expect = 6e-05
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = +2
Query: 215 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRG 379
+F+ RPD++ +SM QP+ AG +T+AES+G+GR A +PRV+G
Sbjct: 22 IFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTAESFGSGRGAAMVPRVKG 76
Score = 41.5 bits (93), Expect = 0.028
Identities = 30/143 (20%), Positives = 56/143 (39%), Gaps = 1/143 (0%)
Frame = +3
Query: 393 GPVRXAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIE 572
G + AF GGR P + +H + RGH +
Sbjct: 76 GSSKAAFVPQAIGGRKAHPPRVNTIYHEKINKKERTLAIRSAIAATANKELVEQRGHQVS 135
Query: 573 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKGVQVSASSCW*G*NAQPSSYQR- 749
++ ++P V+ D+++ + TK+ + L DI++ + G + Y+
Sbjct: 136 ELEQIPFVIDDEIETVKTTKETREIFKDLGIMDDIVRAKKGRKIKSGKG-KLRGRKYRTP 194
Query: 750 KGPLIIFNKDQGLTRAFRXIPGV 818
KGPL++ D+G++ R GV
Sbjct: 195 KGPLVVVGNDRGISLGARNHAGV 217
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 49.2 bits (112), Expect = 1e-04
Identities = 30/130 (23%), Positives = 54/130 (41%)
Frame = +3
Query: 429 GGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADK 608
GGR P KP R+W + R H+ E ELP VV+++
Sbjct: 87 GGRRAHPPKPERKWAEKINKKEMRKALKSAIAATANEELVRQRSHVFEG--ELPKVVSNE 144
Query: 609 VQEINKTKQAVIFLRRLKAWSDILKGVQVSASSCW*G*NAQPSSYQRKGPLIIFNKDQGL 788
++ + +TK R + ++D+ + + G ++K L++ KD G+
Sbjct: 145 LESVKRTKDVAEVFRAIGVYADVERAKERKRYRAGRGKMRGRRYVKKKSVLLVVGKDDGV 204
Query: 789 TRAFRXIPGV 818
+A + +PGV
Sbjct: 205 VKAAKNLPGV 214
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +2
Query: 215 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGG 382
VF RPD++ +++ + RQPY + +G S E+WG G AR+PR + G
Sbjct: 21 VFAEEFRPDIIKRAVLALQSHRRQPYGPNPLSGVDYSWENWGPGHGYARVPRWKLG 76
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 48.8 bits (111), Expect = 2e-04
Identities = 28/88 (31%), Positives = 47/88 (53%)
Frame = +3
Query: 555 RGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKGVQVSASSCW*G*NAQP 734
RGH ++ +LP+VV D V+ INKTK A+ L+ L + DI + + G +
Sbjct: 131 RGHRFKEGLKLPIVVEDGVEGINKTKDAIALLKNLGVYEDIERSREGKHIRAGRG-KMRG 189
Query: 735 SSYQRKGPLIIFNKDQGLTRAFRXIPGV 818
Y++ ++I ++ +AFR +PGV
Sbjct: 190 RRYKQPKSVLIVARNSSAMKAFRSLPGV 217
Score = 38.3 bits (85), Expect = 0.26
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +2
Query: 215 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGG 382
VF +R D++ ++S + RQPY S AG + + G ++R+PR+ GG
Sbjct: 23 VFDTEVREDIIRRAFRAISLSMRQPYGSSPLAGMRRVGHTTRPGLGISRMPRIAGG 78
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 47.6 bits (108), Expect = 4e-04
Identities = 23/55 (41%), Positives = 32/55 (58%)
Frame = +2
Query: 215 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRG 379
+F+ P+R DL+ +S QP AG +TSA S G GR VAR+PR++G
Sbjct: 34 IFRFPVRKDLIRRAFLSEFTARLQPKGRDPMAGKRTSAVSLGVGRGVARVPRIKG 88
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +2
Query: 215 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRG 379
VF+ P+R DL+ + N +Q Y + AG +T AES+G+GR A +P+ G
Sbjct: 21 VFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPKQDG 75
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 42.3 bits (95), Expect = 0.016
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 215 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG--TGRAVARIPRVRGGGT 388
VF P R DL+ + + + QP AG SA+S TG ARI R++GGG
Sbjct: 21 VFGTPYRRDLIKKAYTILDTHHFQPKGTHPTAGMDVSADSLNPPTGHGQARIARMKGGGG 80
Query: 389 HRSGQ 403
R G+
Sbjct: 81 RRRGE 85
>UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_113, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 145
Score = 41.9 bits (94), Expect = 0.021
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +3
Query: 552 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILK 683
ARGH IE + ELPLV+ D + ++KT + L+++ A D+ K
Sbjct: 24 ARGHRIESVLELPLVIGDSTKSVDKTSTTIDILKQVGACPDVEK 67
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 41.5 bits (93), Expect = 0.028
Identities = 30/84 (35%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +2
Query: 407 CLR*HVSWWTYVRPHEALAALAPSRQPPTAESGLGSSRCCYRRPSARSG*RTHY*KDSRA 586
C+R HV WW +VR E L LAP QP A L C R A +G RA
Sbjct: 142 CVRQHVPWWPHVRADEDLPPLAPQDQP--APEALRCGVCARRVVCAVAGDVARPPDRQRA 199
Query: 587 --SLGCS*QSPGDQQDQTGCHLPE 652
+ G PG ++D+ G +PE
Sbjct: 200 GGAAGGGGLDPGLREDEGGYGVPE 223
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 39.9 bits (89), Expect = 0.085
Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Frame = +3
Query: 549 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKGVQVSASSCW*G*NA 728
+ARGHII+K +P+VV D ++++ KTK+ L +L ++ + ++ + G
Sbjct: 142 KARGHIIDK--PVPIVV-DGLEQLRKTKEIQQLLLKLGLEKELERVYEIKRRA-GKGKRR 197
Query: 729 QPSSYQRKGPLIIFNK-DQGLTRAFRXIPGV 818
+ +RKGPLI+ N ++ L +A IPG+
Sbjct: 198 GRAYIERKGPLIVVNDYNEQLFKAVDNIPGL 228
>UniRef50_A7F9H5 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 1513
Score = 36.7 bits (81), Expect = 0.79
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 533 AGSSNGCCQGRSPLSEVDATVPAPPGLRGGEHTSTTT 423
AG +G +P E+ A +P PPGL G+H S+ T
Sbjct: 232 AGLGDGTAVQMTPEGEIKAEIPKPPGLNDGDHVSSIT 268
>UniRef50_A6SHQ7 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1512
Score = 36.7 bits (81), Expect = 0.79
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 533 AGSSNGCCQGRSPLSEVDATVPAPPGLRGGEHTSTTT 423
AG +G +P E+ A +P PPGL G+H S+ T
Sbjct: 232 AGLGDGSAVQMTPEGEIKAEIPKPPGLNDGDHVSSIT 268
>UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein
DKFZp434E026; n=1; Homo sapiens|Rep: Putative
uncharacterized protein DKFZp434E026 - Homo sapiens
(Human)
Length = 158
Score = 36.3 bits (80), Expect = 1.0
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -1
Query: 554 SLNERWDAGSSNGCCQGRSPLSEVDATVPAPPGL 453
+L +W S+G C G SPLS A PAPPGL
Sbjct: 106 ALPGKWHLLLSSGLCGGNSPLSGNGAVCPAPPGL 139
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 35.9 bits (79), Expect = 1.4
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = +2
Query: 215 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSK-------EAGHQTSAESWGTGRAVARIPRV 373
VF IR DL+ ++ N RQ Y + +AG + S E WG GR V+RI R
Sbjct: 53 VFSGEIREDLIRRAVLASRANRRQSYGHREHDGKRKPQAGMKHSVEWWGKGRGVSRIMRK 112
Query: 374 RGGGT 388
G T
Sbjct: 113 AGQRT 117
>UniRef50_A6FXV5 Cluster: Putative uncharacterized protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative
uncharacterized protein - Plesiocystis pacifica SIR-1
Length = 342
Score = 35.5 bits (78), Expect = 1.8
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Frame = +1
Query: 271 QELEAALLREQGGWSPNQCRIMGYRTCC--RPNSSCPWWWYP*VRSGXPSVTCVVVDVCS 444
+EL AALL G SP C R CC R + P W R+G S + V+ D +
Sbjct: 261 EELTAALLAFANGSSPGDCLTASTRPCCASRAGTRSPTPWACRRRTGRGSSSVVIADWSA 320
Query: 445 PPRSPGGAGTVASTSDSG 498
P +G S G
Sbjct: 321 SPTGSRISGPCPPGSPHG 338
>UniRef50_A3YC61 Cluster: Ornithine cyclodeaminase; n=1; Marinomonas
sp. MED121|Rep: Ornithine cyclodeaminase - Marinomonas
sp. MED121
Length = 321
Score = 35.1 bits (77), Expect = 2.4
Identities = 35/131 (26%), Positives = 53/131 (40%), Gaps = 2/131 (1%)
Frame = +2
Query: 125 MSLSVARPLXVGVFREERDGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 304
+S + A +F + G QP P + +FK D HV +++S QPY V K
Sbjct: 13 LSFTAAIDAVKEIFIDYSKGLIEQPEPMQILFKES-NGAFFGDCHVKAAQHSEQPYFVIK 71
Query: 305 EAG--HQTSAESWGTGRAVARIPRVRGGGTHRSGQGCLR*HVSWWTYVRPHEALAALAPS 478
A +Q +A+ + + + G L W T VR A ALA S
Sbjct: 72 VASGFYQNTAKGLAANNGLVLVMSAQTG-----VPVALLQDEGWLTQVRT-AAAGALAAS 125
Query: 479 RQPPTAESGLG 511
+P ++ LG
Sbjct: 126 LKPVCEDACLG 136
>UniRef50_Q4RK83 Cluster: Chromosome 2 SCAF15032, whole genome
shotgun sequence; n=2; Clupeocephala|Rep: Chromosome 2
SCAF15032, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 386
Score = 34.7 bits (76), Expect = 3.2
Identities = 28/68 (41%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +2
Query: 359 RIPRVRGGGTHRSGQGCLR*HVSWWTYVRPHEA---LAALAPSRQPPTAE-SGLGSSRCC 526
R+ R R S Q L+ WWT RPH +A AP R P T SGLGS
Sbjct: 284 RLHRARNAAAE-SRQHLLQGLSCWWT--RPHRRGTRPSARAPPRVPATPPPSGLGSGCYG 340
Query: 527 YRRPSARS 550
YRRP R+
Sbjct: 341 YRRPLGRT 348
>UniRef50_Q15911 Cluster: Zinc finger homeobox protein 3; n=25;
Amniota|Rep: Zinc finger homeobox protein 3 - Homo
sapiens (Human)
Length = 3703
Score = 34.7 bits (76), Expect = 3.2
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +1
Query: 412 SVTCVVVDVCSPPRSPGGAGTVASTSDSGERPWQQ 516
S T + D CSP SPG +G+ + DSG+RP Q+
Sbjct: 2915 SETSSLADPCSP--SPGASGSAGKSGDSGDRPGQK 2947
>UniRef50_UPI0000F2E191 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 278
Score = 34.3 bits (75), Expect = 4.2
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 8/76 (10%)
Frame = +2
Query: 344 GRAVARIPRVRGGGTHRSGQGCLR*HVSWWTYVR--------PHEALAALAPSRQPPTAE 499
GR PR RG +G G + V W R P + + A + P +
Sbjct: 105 GRGNDGSPRPRGSAQEAAGSGFPKHSVFPWPQARGSRAPEMEPIKGASGRAGPARTPGSR 164
Query: 500 SGLGSSRCCYRRPSAR 547
SG G RCC R PS +
Sbjct: 165 SGTGHPRCCLRHPSTK 180
>UniRef50_Q021H3 Cluster: Peptidase M61 domain protein precursor;
n=1; Solibacter usitatus Ellin6076|Rep: Peptidase M61
domain protein precursor - Solibacter usitatus (strain
Ellin6076)
Length = 626
Score = 33.9 bits (74), Expect = 5.6
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +1
Query: 424 VVVDVCSPPRSPGGAGTVASTSDSGERPWQQPLLLPASQRS 546
VV D SPP S G + ++TS+ W Q LL P RS
Sbjct: 107 VVFDFISPPESEGFSSGASATSELAVLSWNQLLLYPEGARS 147
>UniRef50_A0H7D7 Cluster: Cytochrome c, class I; n=4;
Comamonadaceae|Rep: Cytochrome c, class I - Comamonas
testosteroni KF-1
Length = 991
Score = 33.9 bits (74), Expect = 5.6
Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 296 VSKEAGHQTSAESWGTGRAVARIPRVRGG-GTHRSGQGCLR*HVSWW 433
VS G Q S ES TGR V R+ G GT R CL H+S W
Sbjct: 94 VSHSPGSQESYESIDTGRYVWRMAGASAGSGTARVAAWCLDGHISLW 140
>UniRef50_Q75LF8 Cluster: Putative uncharacterized protein
OSJNBb0079B16.11; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBb0079B16.11 - Oryza sativa subsp. japonica (Rice)
Length = 228
Score = 33.9 bits (74), Expect = 5.6
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = +2
Query: 167 REERDGAGXQPSP---SRFVFKAPIRPDLVNDVHVSMSKNSR-QPYCVSKEAGHQTSAES 334
R+ + G+G + P ++ AP D +V S + R P C S E + +AES
Sbjct: 90 RQRQGGSGWERHPWPHDSWIHAAPTAADDEKEVARSNAHARRPDPRCPSDEEDEEEAAES 149
Query: 335 WGTGRAVARIPRVRGGGTH 391
TG A R R+ G T+
Sbjct: 150 GATGLAHTRAGRIHAGPTN 168
>UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_48, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 131
Score = 33.9 bits (74), Expect = 5.6
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -2
Query: 451 VGANIRPPRHMLPKA 407
VGANI PPRHMLPKA
Sbjct: 107 VGANILPPRHMLPKA 121
>UniRef50_Q6PEV8 Cluster: Uncharacterized protein CXorf39; n=19;
Euteleostomi|Rep: Uncharacterized protein CXorf39 - Homo
sapiens (Human)
Length = 388
Score = 33.9 bits (74), Expect = 5.6
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Frame = -1
Query: 647 EDDSLFGLVDLLDFVSYNQGKLGNLFNNVSSSLNERWDAGSS--------NGCCQGRSPL 492
+ D + L+D DF S++ G++ ++VSSS++ WD S + G L
Sbjct: 93 DQDDCYSLLDDQDFTSFDLFPEGSVCSDVSSSISTYWDWSDSEFEWQLPGSDIASGSDVL 152
Query: 491 SEVDATVPAPPGL 453
S+V ++P+ P L
Sbjct: 153 SDVIPSIPSSPCL 165
>UniRef50_Q6ZQU4 Cluster: CDNA FLJ46885 fis, clone UTERU3016274;
n=1; Homo sapiens|Rep: CDNA FLJ46885 fis, clone
UTERU3016274 - Homo sapiens (Human)
Length = 410
Score = 33.5 bits (73), Expect = 7.4
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +1
Query: 352 CRPNSSCPWWWYP*VRSGXPSVTCVVVDVCSPPRSPGGAGTVASTSDSGERPWQQPL 522
C P+ WW P RSG D+ P++P G G+ R WQ+PL
Sbjct: 356 CFPHGERGWWSVP-TRSGCLQAQLCPADLTGQPQAP-GLGSSTCRHRRKPRAWQEPL 410
>UniRef50_A2QMQ0 Cluster: Contig An07c0080, complete genome; n=11;
Pezizomycotina|Rep: Contig An07c0080, complete genome -
Aspergillus niger
Length = 598
Score = 33.5 bits (73), Expect = 7.4
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = -1
Query: 680 KDIRPCLEAPQEDDSLFGLVDLLDFVSYNQGKLGNLFNNVSSSLNERWDAGSSNGCCQGR 501
+ + PC+ A D F L L+F S N + F+ ++ +E G++NG QG
Sbjct: 283 QSVDPCISAQVAQDHTFAL---LEFKSPNDATVALAFDGIAMEEHEAAGNGAANGAAQGL 339
Query: 500 SPLSEVDATVP 468
D VP
Sbjct: 340 EVRRPKDYIVP 350
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 856,014,668
Number of Sequences: 1657284
Number of extensions: 17906184
Number of successful extensions: 49521
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 46913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49432
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80342087756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -