Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_C22
         (890 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           24   5.4  
AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding pr...    24   7.1  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   7.1  
AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding pr...    24   7.1  

>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 446 GEHTSTTTHVTEGXPD 399
           G  T+TT HVT   PD
Sbjct: 436 GSSTTTTNHVTNNIPD 451


>AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding
           protein AgamOBP31 protein.
          Length = 313

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 223 GAHTSGPGQ*CSRFYVQELEAALLR 297
           G +T+  G   SRFYV++LE   LR
Sbjct: 199 GLYTTESGIHLSRFYVRDLEVNDLR 223


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 527 SSNGCCQGRSPLSEVDATVPAPPGLRGGE 441
           +S GCC  +    + +  +P P GL+G +
Sbjct: 89  TSGGCCLPKCFAEKGNRGLPGPMGLKGAK 117


>AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 304

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 223 GAHTSGPGQ*CSRFYVQELEAALLR 297
           G +T+  G   SRFYV++LE   LR
Sbjct: 199 GLYTTESGIHLSRFYVRDLEVNDLR 223


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 869,271
Number of Sequences: 2352
Number of extensions: 19306
Number of successful extensions: 55
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95920632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)