Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_C21
(908 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 415 e-116
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 415 e-116
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 246 5e-94
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 305 2e-83
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 226 1e-59
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 226 1e-59
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 210 8e-55
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 4e-33
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 95 6e-20
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 95 6e-20
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 95 6e-20
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 92 4e-19
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 92 4e-19
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 58 9e-09
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 56 3e-08
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 42 5e-05
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 45 7e-05
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 45 9e-05
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 45 9e-05
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 40 0.002
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 39 0.006
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 39 0.006
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 38 0.010
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 36 0.030
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 36 0.040
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 34 0.12
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 34 0.12
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.21
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 31 0.86
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 3.5
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 3.5
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 3.5
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 3.5
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 3.5
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 3.5
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 6.1
AF067211-3|ABC71845.1| 720|Caenorhabditis elegans Hypothetical ... 29 6.1
AF067211-2|AAC16990.3| 745|Caenorhabditis elegans Hypothetical ... 29 6.1
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 29 6.1
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 415 bits (1022), Expect = e-116
Identities = 208/267 (77%), Positives = 218/267 (81%)
Frame = +1
Query: 103 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 282
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 283 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 462
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 463 GEFEAGISKNGQTREHALLAFTLGVKQLIVGXNKMDSTEPPYSEPRFEEIKKEVSSYIKK 642
GEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180
Query: 643 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFMGSRXWQVERKESXX*RXNASLKLSMPSW 822
IGYNP AV FVPISG++GDNMLE S+ MPWF G W VERKE L+
Sbjct: 181 IGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKG---WAVERKEGNA-SGKTLLEALDSII 236
Query: 823 PPXXPX*QAPXFFPXLXRIQKSVGIGT 903
PP P P P L + K GIGT
Sbjct: 237 PPQRPT-DRPLRLP-LQDVYKIGGIGT 261
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 415 bits (1022), Expect = e-116
Identities = 208/267 (77%), Positives = 218/267 (81%)
Frame = +1
Query: 103 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 282
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 283 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 462
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 463 GEFEAGISKNGQTREHALLAFTLGVKQLIVGXNKMDSTEPPYSEPRFEEIKKEVSSYIKK 642
GEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180
Query: 643 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFMGSRXWQVERKESXX*RXNASLKLSMPSW 822
IGYNP AV FVPISG++GDNMLE S+ MPWF G W VERKE L+
Sbjct: 181 IGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKG---WAVERKEGNA-SGKTLLEALDSII 236
Query: 823 PPXXPX*QAPXFFPXLXRIQKSVGIGT 903
PP P P P L + K GIGT
Sbjct: 237 PPQRPT-DRPLRLP-LQDVYKIGGIGT 261
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 246 bits (602), Expect(2) = 5e-94
Identities = 113/117 (96%), Positives = 116/117 (99%)
Frame = +1
Query: 103 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 282
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 283 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 453
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 117 bits (281), Expect(2) = 5e-94
Identities = 66/120 (55%), Positives = 74/120 (61%)
Frame = +1
Query: 544 LIVGXNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 723
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 724 MPWFMGSRXWQVERKESXX*RXNASLKLSMPSWPPXXPX*QAPXFFPXLXRIQKSVGIGT 903
MPWF G W VERKE L+ PP P P P L + K GIGT
Sbjct: 174 MPWFKG---WAVERKEGNA-SGKTLLEALDSIIPPQRPT-DRPLRLP-LQDVYKIGGIGT 227
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 305 bits (750), Expect = 2e-83
Identities = 147/172 (85%), Positives = 155/172 (90%)
Frame = +1
Query: 103 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 282
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 283 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 462
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 463 GEFEAGISKNGQTREHALLAFTLGVKQLIVGXNKMDSTEPPYSEPRFEEIKK 618
GEFEAGISKNGQTREHALLA TLGVKQL+ + T P S R + I++
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLV---SLRSPTRSPDSSRRSDTIQR 169
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 226 bits (553), Expect = 1e-59
Identities = 108/211 (51%), Positives = 152/211 (72%), Gaps = 1/211 (0%)
Frame = +1
Query: 112 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 291
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 292 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 471
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 286
Query: 472 EAGISKNGQTREHALLAFTLGVKQLIVGXNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIG 648
E G GQT+EHALL +LGV QLIV NK+D+ + +S+ RF+EIK +S ++ ++ G
Sbjct: 287 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAG 344
Query: 649 YNPAAVAFVPISGWHGDNMLEPSTKMPWFMG 741
++ FVP+SG+ G+N+++ ++ W+ G
Sbjct: 345 FSKP--KFVPVSGFTGENLIK-RMELDWYDG 372
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 226 bits (553), Expect = 1e-59
Identities = 108/211 (51%), Positives = 152/211 (72%), Gaps = 1/211 (0%)
Frame = +1
Query: 112 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 291
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 292 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 471
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 304
Query: 472 EAGISKNGQTREHALLAFTLGVKQLIVGXNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIG 648
E G GQT+EHALL +LGV QLIV NK+D+ + +S+ RF+EIK +S ++ ++ G
Sbjct: 305 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAG 362
Query: 649 YNPAAVAFVPISGWHGDNMLEPSTKMPWFMG 741
++ FVP+SG+ G+N+++ ++ W+ G
Sbjct: 363 FSKP--KFVPVSGFTGENLIK-RMELDWYDG 390
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 210 bits (514), Expect = 8e-55
Identities = 94/198 (47%), Positives = 138/198 (69%), Gaps = 1/198 (0%)
Frame = +1
Query: 106 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 285
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 286 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 465
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A G
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRG 223
Query: 466 EFEAGISKNGQTREHALLAFTLGVKQLIVGXNKMDSTEPPYSEPRFEEIKKEVSSYIKKI 645
EFE G + GQTREH++L T GVK L++ NKMD + E RF+EI+ +++ +++K+
Sbjct: 224 EFETGFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKL 283
Query: 646 GYNPAA-VAFVPISGWHG 696
G+NP + +VP SG G
Sbjct: 284 GFNPKTDITYVPCSGLTG 301
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 138 bits (335), Expect = 4e-33
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +1
Query: 103 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 282
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 283 DKLKAER 303
DKLK +
Sbjct: 61 DKLKVTK 67
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 95.1 bits (226), Expect = 6e-20
Identities = 65/183 (35%), Positives = 95/183 (51%), Gaps = 2/183 (1%)
Frame = +1
Query: 109 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 288
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 289 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 468
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 149
Query: 469 FEAGISKNGQTREHALLAFTLGV--KQLIVGXNKMDSTEPPYSEPRFEEIKKEVSSYIKK 642
QTREH LLA +GV ++V NK+D E P +E R E ++ ++ + +
Sbjct: 150 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 199
Query: 643 IGY 651
GY
Sbjct: 200 FGY 202
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 95.1 bits (226), Expect = 6e-20
Identities = 65/183 (35%), Positives = 95/183 (51%), Gaps = 2/183 (1%)
Frame = +1
Query: 109 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 288
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 289 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 468
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 469 FEAGISKNGQTREHALLAFTLGV--KQLIVGXNKMDSTEPPYSEPRFEEIKKEVSSYIKK 642
QTREH LLA +GV ++V NK+D E P +E R E ++ ++ + +
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 200
Query: 643 IGY 651
GY
Sbjct: 201 FGY 203
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 95.1 bits (226), Expect = 6e-20
Identities = 65/183 (35%), Positives = 95/183 (51%), Gaps = 2/183 (1%)
Frame = +1
Query: 109 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 288
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 289 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 468
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 469 FEAGISKNGQTREHALLAFTLGV--KQLIVGXNKMDSTEPPYSEPRFEEIKKEVSSYIKK 642
QTREH LLA +GV ++V NK+D E P +E R E ++ ++ + +
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 200
Query: 643 IGY 651
GY
Sbjct: 201 FGY 203
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 92.3 bits (219), Expect = 4e-19
Identities = 66/189 (34%), Positives = 96/189 (50%), Gaps = 2/189 (1%)
Frame = +1
Query: 115 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 288
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 289 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 468
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 469 FEAGISKNGQTREHALLAFTLGVKQLIVGXNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG 648
E QT+EH +LA +GVK + + NK D E E + ++ E + G
Sbjct: 146 ME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHG 194
Query: 649 YNPAAVAFV 675
+N A +
Sbjct: 195 FNGDATPVI 203
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 92.3 bits (219), Expect = 4e-19
Identities = 66/189 (34%), Positives = 96/189 (50%), Gaps = 2/189 (1%)
Frame = +1
Query: 115 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 288
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 289 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 468
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 469 FEAGISKNGQTREHALLAFTLGVKQLIVGXNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG 648
E QT+EH +LA +GVK + + NK D E E + ++ E + G
Sbjct: 146 ME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHG 194
Query: 649 YNPAAVAFV 675
+N A +
Sbjct: 195 FNGDATPVI 203
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 58.0 bits (134), Expect = 9e-09
Identities = 47/148 (31%), Positives = 66/148 (44%)
Frame = +1
Query: 127 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 306
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 307 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 486
RGIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG------- 138
Query: 487 KNGQTREHALLAFTLGVKQLIVGXNKMD 570
QT + LAF + Q+I NK+D
Sbjct: 139 VQAQTIANFWLAFEKNI-QIIPVINKID 165
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 56.0 bits (129), Expect = 3e-08
Identities = 39/113 (34%), Positives = 53/113 (46%)
Frame = +1
Query: 127 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 306
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 307 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 465
RGIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 54.4 bits (125), Expect = 1e-07
Identities = 38/113 (33%), Positives = 53/113 (46%)
Frame = +1
Query: 127 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 306
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 307 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 465
RGITI A + + IID PGH DF + D AVL++ G G
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG 147
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 41.9 bits (94), Expect(2) = 5e-05
Identities = 37/108 (34%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Frame = +1
Query: 250 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 426
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 427 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGXNKMD 570
AD VL+VAA G E QT + A V QL+V NK+D
Sbjct: 228 ADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLVVAVNKID 267
Score = 23.0 bits (47), Expect(2) = 5e-05
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 130 IVVIGHVDSGKST 168
+ ++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 45.2 bits (102), Expect = 7e-05
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Frame = +1
Query: 103 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 255
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 256 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 423
+ + L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALG 132
Query: 424 QADCAVLIVAAGTG 465
D A+++V +G
Sbjct: 133 VTDGALVVVDCVSG 146
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 44.8 bits (101), Expect = 9e-05
Identities = 52/199 (26%), Positives = 84/199 (42%), Gaps = 3/199 (1%)
Frame = +1
Query: 124 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 303
+N+ ++GHVDSGK+T T + E+G S A
Sbjct: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54
Query: 304 ERGITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 480
R T+D+ + S + +ID PGH I+ ++ ++ D A++I+ + AG
Sbjct: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAG 108
Query: 481 ISKNGQTREHALLAFTLGVKQLIVGXNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY--N 654
I QT EH LLA ++I+ NK D E + + E K+V +K +G N
Sbjct: 109 IQP--QTAEHLLLASKFCPNRVIIVLNKCDLAE----KSKISESAKKVRKGLKSMGVDEN 162
Query: 655 PAAVAFVPISGWHGDNMLE 711
V G+ + ML+
Sbjct: 163 SPIVEMSLADGYFKEEMLQ 181
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 44.8 bits (101), Expect = 9e-05
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Frame = +1
Query: 103 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 255
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 256 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 423
+ + L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALR 132
Query: 424 QADCAVLIVAAGTG 465
D A+++V +G
Sbjct: 133 VTDGALVVVDCVSG 146
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 39.9 bits (89), Expect = 0.002
Identities = 53/195 (27%), Positives = 80/195 (41%), Gaps = 11/195 (5%)
Frame = +1
Query: 79 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTIEKFEKEAQEM 249
++IRD P K+ + V+G+VD+GKST G L + G RT K E
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKHEFES 185
Query: 250 GKGSFKYAWVL------DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMI 411
G+ S +L + + +D + +K VT ID GH ++K I
Sbjct: 186 GRTSSVGNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAK-LVTFIDLAGHEKYLKTTI 244
Query: 412 TGTS--QADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGXNKMDSTEPP 585
G + D +L++ A G G T+EH LA +L V +V K+D
Sbjct: 245 FGMTGHMPDYTMLMIGANMGII-------GTTKEHLSLALSLHVPVYLV-VTKIDMCPAN 296
Query: 586 YSEPRFEEIKKEVSS 630
E + I + V S
Sbjct: 297 ILEETMKNITRLVRS 311
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 38.7 bits (86), Expect = 0.006
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +1
Query: 109 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 285
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 286 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 450
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 38.7 bits (86), Expect = 0.006
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +1
Query: 109 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 285
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 286 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 450
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +1
Query: 358 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 537
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 538 KQLIVGXNKMDSTEPPYSEPRFEEI 612
L++ NK+D + + +E+I
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 36.3 bits (80), Expect = 0.030
Identities = 55/199 (27%), Positives = 86/199 (43%), Gaps = 8/199 (4%)
Frame = +1
Query: 76 QFVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC--GGIDKRTIEKFEKEAQEM 249
+ ++R P+ ++ + + V+G D GKST G L C G K I F + E+
Sbjct: 154 EVLVRKVPE-SQQFIEVRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEV 211
Query: 250 GKGSFKYAWVLDKLKAERERGITIDIALWKF----ETSKYYVTIIDAPGHRDFIKNMITG 417
G K + V + + RG ++ A E S VT+ID G + K I G
Sbjct: 212 RTG--KTSSVCNDVIGFDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHG 269
Query: 418 TS--QADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGXNKMDSTEPPYS 591
+ A L+VAA + GI+ TREH L L + ++ KMD +
Sbjct: 270 LTGYTPHFACLVVAA-----DRGIT--WATREHLGLIAALNIPMFVL-ITKMDLVD---- 317
Query: 592 EPRFEEIKKEVSSYIKKIG 648
++I K+VS+ + K G
Sbjct: 318 RQGLKKIIKDVSNLVAKAG 336
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 35.9 bits (79), Expect = 0.040
Identities = 55/208 (26%), Positives = 85/208 (40%), Gaps = 12/208 (5%)
Frame = +1
Query: 79 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTIEKFEKEAQEM 249
++IRD P K+ + V+G+VD+GKST G L + G RT K E
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKHEFES 185
Query: 250 GKGSFKYAWVL------DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMI 411
G+ S +L + + +D + +K VT ID GH ++K I
Sbjct: 186 GRTSSVGNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAK-LVTFIDLAGHEIYLKTTI 244
Query: 412 TGTSQ---ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGXNKMDSTEP 582
G + + +L++ A G G T+EH LA +L V +V K+D P
Sbjct: 245 FGMHRPYARNYTMLMIGANMGII-------GTTKEHLSLALSLHVPVYLV-VTKIDMC-P 295
Query: 583 PYSEPRFEEIKKEVSSYIKKIGYNPAAV 666
Y EE K ++ ++ P V
Sbjct: 296 AYI---LEETMKNITRLVRSAKKLPILV 320
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 34.3 bits (75), Expect = 0.12
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +1
Query: 127 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 306
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 307 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 465
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 34.3 bits (75), Expect = 0.12
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +1
Query: 127 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 306
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 307 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 465
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.21
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1
Query: 563 LFXPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 435
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 31.5 bits (68), Expect = 0.86
Identities = 25/78 (32%), Positives = 34/78 (43%)
Frame = +1
Query: 367 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 546
IID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 547 IVGXNKMDSTEPPYSEPR 600
++ NK+D S PR
Sbjct: 605 VIALNKIDRLYEYESNPR 622
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 205 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 306
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 205 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 306
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 626 PHTSRRLATTQLLSLSCPFLD 688
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 626 PHTSRRLATTQLLSLSCPFLD 688
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 626 PHTSRRLATTQLLSLSCPFLD 688
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 626 PHTSRRLATTQLLSLSCPFLD 688
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 124 INIVVIGHVDSGKSTTT 174
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>AF067211-3|ABC71845.1| 720|Caenorhabditis elegans Hypothetical
protein B0205.1b protein.
Length = 720
Score = 28.7 bits (61), Expect = 6.1
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 13/114 (11%)
Frame = +1
Query: 391 DFIKNMI-TGTSQADCAVLIV--AAGTGEFEAGISKNGQTREHALLAF-TLGVKQLIVGX 558
DF+ MI +G Q D IV + G+ E ++G R + + TLG ++ ++
Sbjct: 445 DFLAQMIQSGAVQLDENYRIVRYTSNNGKVELSEKRSGVKRRSSTKSSKTLGKRRQVIEK 504
Query: 559 NKMDSTEP---------PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWH 693
D EP P EP +EEI + Y + + P + PI H
Sbjct: 505 ELSDLDEPEFVGIMHGYPKQEPVYEEIINQDMRYNNEDPHIPPEIEQFPIQAVH 558
>AF067211-2|AAC16990.3| 745|Caenorhabditis elegans Hypothetical
protein B0205.1a protein.
Length = 745
Score = 28.7 bits (61), Expect = 6.1
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 13/114 (11%)
Frame = +1
Query: 391 DFIKNMI-TGTSQADCAVLIV--AAGTGEFEAGISKNGQTREHALLAF-TLGVKQLIVGX 558
DF+ MI +G Q D IV + G+ E ++G R + + TLG ++ ++
Sbjct: 470 DFLAQMIQSGAVQLDENYRIVRYTSNNGKVELSEKRSGVKRRSSTKSSKTLGKRRQVIEK 529
Query: 559 NKMDSTEP---------PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWH 693
D EP P EP +EEI + Y + + P + PI H
Sbjct: 530 ELSDLDEPEFVGIMHGYPKQEPVYEEIINQDMRYNNEDPHIPPEIEQFPIQAVH 583
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.1
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -3
Query: 546 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 388
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 387 VSRSINDGNIVLASFELPESNIDCDTTLTLSL*FVQYPSI 268
S S +D E+P ++ C++ +L + +Y SI
Sbjct: 84 FSGSKSDA-------EIPSTSNRCESFKWSNLDYSKYLSI 116
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,629,964
Number of Sequences: 27780
Number of extensions: 404985
Number of successful extensions: 1133
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1114
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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