Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_C18
         (945 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    31   0.067
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    31   0.067
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    27   1.1  

>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 30.7 bits (66), Expect = 0.067
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = +2

Query: 287 LRP--PXRASQKSTLKSEVAKPDRTIKIPGVSPWKLPRCALLFPTLPLTGYLSAFLPSGS 460
           LRP  P  A Q+     EV      + +PGV+ W  P+    FPT      + A + SG+
Sbjct: 48  LRPLIPDEAPQQPEKWEEVMADVERVIMPGVTHWHSPKFHAYFPTANSYPAIVADMLSGA 107

Query: 461 VA 466
           +A
Sbjct: 108 IA 109


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 30.7 bits (66), Expect = 0.067
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = +2

Query: 287 LRP--PXRASQKSTLKSEVAKPDRTIKIPGVSPWKLPRCALLFPTLPLTGYLSAFLPSGS 460
           LRP  P  A Q+     EV      + +PGV+ W  P+    FPT      + A + SG+
Sbjct: 79  LRPLIPDEAPQQPEKWEEVMADVERVIMPGVTHWHSPKFHAYFPTANSYPAIVADMLSGA 138

Query: 461 VA 466
           +A
Sbjct: 139 IA 140


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -1

Query: 222 SHVLSCVITLILWITVLPPLSELIPLAA 139
           S +LS V+ L+L   +LPP S ++PL A
Sbjct: 269 SILLSLVVFLLLVSKILPPTSLVLPLIA 296


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 885,058
Number of Sequences: 2352
Number of extensions: 17775
Number of successful extensions: 39
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 103362750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)