Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_C18
(945 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g58040.1 68418.m07263 fip1 motif-containing protein contains ... 31 1.1
At3g24380.1 68416.m03061 hypothetical protein similar to At5g368... 31 1.5
At1g27790.1 68414.m03401 hypothetical protein similar to At3g243... 31 1.5
At5g35010.1 68418.m04132 hypothetical protein similar to At3g243... 30 1.9
At5g20380.1 68418.m02424 transporter-related low similarity to v... 30 1.9
At2g05564.1 68415.m00590 hypothetical protein 30 1.9
At4g05290.1 68417.m00801 hypothetical protein similar to At3g243... 30 2.6
At3g43390.1 68416.m04592 hypothetical protein similar to At3g243... 29 3.4
At5g45050.2 68418.m05524 disease resistance protein-related simi... 29 5.9
At5g45050.1 68418.m05523 disease resistance protein-related simi... 29 5.9
At2g14774.1 68415.m01671 hypothetical protein 29 5.9
>At5g58040.1 68418.m07263 fip1 motif-containing protein contains Pfam
profile PF05182: Fip1 motif
Length = 1192
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = -3
Query: 550 NGGFVHTAQLGANDLH--RTEIPTA*AMRKRHASRREKGGQVSGKRQGR 410
NG V T G ND R+EIP KRH G ++ ++GR
Sbjct: 1003 NGSSVVTGSKGTNDARNCRSEIPHQPNTAKRHKENASSGDEIHDSKRGR 1051
>At3g24380.1 68416.m03061 hypothetical protein similar to At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790
Length = 230
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -1
Query: 714 VAVVRPPLQELC--STRLHTSLC*SCYQWLLPVAISRVL 604
V V P E+C +RL +LC CY WL IS++L
Sbjct: 192 VDVSTPECAEVCYIRSRLFNNLCNQCYIWLCAKRISQIL 230
>At1g27790.1 68414.m03401 hypothetical protein similar to At3g24380,
At5g36840, At5g35010, At3g42740, At4g05290, At2g14770,
At3g43390, At2g05560, At4g08880, At1g34730
Length = 120
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -1
Query: 714 VAVVRPPLQELC--STRLHTSLC*SCYQWLLPVAISRVL 604
V V P E+C +RL +LC CY WL IS++L
Sbjct: 82 VDVSTPECAEVCYIRSRLFNNLCNQCYIWLCAKQISQIL 120
>At5g35010.1 68418.m04132 hypothetical protein similar to At3g24380,
At5g36840, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790
Length = 230
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -1
Query: 708 VVRPPLQELC--STRLHTSLC*SCYQWLLPVAISRVL 604
V P E+C +RL +LC CY WL IS++L
Sbjct: 194 VSTPKCAEMCYMRSRLFNNLCNQCYIWLCAKRISQIL 230
>At5g20380.1 68418.m02424 transporter-related low similarity to
vesicular glutamate transporter 3 [Rattus norvegicus]
GI:21685382
Length = 517
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = -1
Query: 261 GLFTVPGLLLAFCSHVLSCVITLILWITVLPPLSELIPLAAAER 130
G +T L + S LS +T W+++LPPL+ ++ + A +
Sbjct: 332 GHYTCLSWLPTYFSEALSLNLTEAAWVSILPPLASIVVTSLASQ 375
>At2g05564.1 68415.m00590 hypothetical protein
Length = 231
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -1
Query: 708 VVRPPLQELC--STRLHTSLC*SCYQWLLPVAISRVL 604
V P E+C +RL +LC CY WL IS++L
Sbjct: 195 VSTPECAEMCYMRSRLFNNLCNQCYIWLCAKRISQIL 231
>At4g05290.1 68417.m00801 hypothetical protein similar to At3g24380,
At5g36840, At5g35010, At3g42740, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790
Length = 213
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -1
Query: 699 PPLQELC--STRLHTSLC*SCYQWLLPVAISRVL 604
P E+C +RL +LC CY WL IS++L
Sbjct: 180 PECAEMCYMRSRLFNNLCNQCYIWLCAKRISQIL 213
>At3g43390.1 68416.m04592 hypothetical protein similar to At3g24380,
At5g36840, At5g35010, At3g42740, At4g05290, At2g14770,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At4g05280, At1g25886, At4g03300
Length = 1113
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -1
Query: 708 VVRPPLQELC--STRLHTSLC*SCYQWLLPVAISRVL 604
V P E+C +RL +LC CY WL IS++L
Sbjct: 1077 VSTPECTEMCYMRSRLFNNLCNQCYIWLCAKWISQIL 1113
>At5g45050.2 68418.m05524 disease resistance protein-related similar
to NL27 [Solanum tuberosum] GI:3947735; contains Pfam
profiles PF03106: WRKY DNA -binding domain, PF00931:
NB-ARC domain, PF00560: Leucine Rich Repeat
Length = 1344
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 97 PLPRSLTRCARSFGCGERYQLTQRR 171
P PRS RCA S GC R Q+ + R
Sbjct: 1169 PYPRSYYRCASSKGCFARKQVERSR 1193
>At5g45050.1 68418.m05523 disease resistance protein-related similar
to NL27 [Solanum tuberosum] GI:3947735; contains Pfam
profiles PF03106: WRKY DNA -binding domain, PF00931:
NB-ARC domain, PF00560: Leucine Rich Repeat
Length = 1372
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 97 PLPRSLTRCARSFGCGERYQLTQRR 171
P PRS RCA S GC R Q+ + R
Sbjct: 1197 PYPRSYYRCASSKGCFARKQVERSR 1221
>At2g14774.1 68415.m01671 hypothetical protein
Length = 230
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -1
Query: 708 VVRPPLQELC--STRLHTSLC*SCYQWLLPVAISRVL 604
V P ++C +RL +LC CY WL IS++L
Sbjct: 194 VSTPECADVCYIRSRLFNNLCNQCYIWLCAKRISQIL 230
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,896,556
Number of Sequences: 28952
Number of extensions: 400646
Number of successful extensions: 1102
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1102
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2266029384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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