Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_C17
(865 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 143 4e-33
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 95 2e-18
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 93 6e-18
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 69 1e-10
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 66 1e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 51 4e-05
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.046
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.081
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 39 0.14
UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;... 36 1.7
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 36 1.7
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.3
UniRef50_A5HC74 Cluster: Putative uncharacterized protein; n=1; ... 34 5.3
UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome sh... 33 7.1
UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer ariet... 33 7.1
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.1
UniRef50_A7H8A5 Cluster: Ribonuclease, Rne/Rng family; n=1; Anae... 33 9.3
UniRef50_A3MA42 Cluster: Putative uncharacterized protein; n=1; ... 33 9.3
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 33 9.3
UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase... 33 9.3
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 143 bits (347), Expect = 4e-33
Identities = 77/118 (65%), Positives = 83/118 (70%), Gaps = 2/118 (1%)
Frame = +1
Query: 469 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 648
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 649 CRLPDTV-VFRL-SPXRXSVGAFS*LTL*VSQFGXXRSLXXWAVCTNPPFSPTAAPFP 816
CRLPDT F L R + +++ F WAVCTNPPFSPTAAP+P
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFA-----PSWAVCTNPPFSPTAAPYP 114
Score = 50.8 bits (116), Expect = 4e-05
Identities = 25/41 (60%), Positives = 26/41 (63%)
Frame = +3
Query: 675 PPFSXSXKRWRFLIAHAVGISVRXXSFAPXLGCVHEPPVQP 797
PPFS + WRFLIAHAVGISVR SFAP PP P
Sbjct: 69 PPFSLR-EAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSP 108
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 95.1 bits (226), Expect = 2e-18
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +1
Query: 487 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 648
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 93.5 bits (222), Expect = 6e-18
Identities = 45/56 (80%), Positives = 46/56 (82%)
Frame = +1
Query: 493 RPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 660
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P LP
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +3
Query: 300 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 398
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 69.3 bits (162), Expect = 1e-10
Identities = 41/60 (68%), Positives = 42/60 (70%)
Frame = -3
Query: 542 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAAERP 363
MLVRGAEPMEKR + L V LL CS L PLILWITVLPPLSEL PLAA ERP
Sbjct: 1 MLVRGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 66.1 bits (154), Expect = 1e-09
Identities = 37/66 (56%), Positives = 42/66 (63%)
Frame = -3
Query: 758 SERXXPN*DTYSVSYEKAPTLXRXGERRXTTVSGKRQGRNRRAHEGASRGKRLVSL*SCR 579
SER P+ DT SVSYEKAP + ++ VSGKRQGRNRRAHEGA+ K SL
Sbjct: 36 SERPKPSRDTSSVSYEKAPRFPKG--KKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVG 93
Query: 578 VSPPLT 561
PPLT
Sbjct: 94 FRPPLT 99
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +3
Query: 276 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 434
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 50.8 bits (116), Expect = 4e-05
Identities = 27/71 (38%), Positives = 39/71 (54%)
Frame = +1
Query: 436 ITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 615
I +R + + + P T F S PLT+ITKI Q + +T+ +YK T FPL
Sbjct: 44 IMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPL 103
Query: 616 EAPSCALLFRP 648
++PS +LLF P
Sbjct: 104 QSPSYSLLFPP 114
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 79 DPDMIRYIDEFGQTTTRMQ 135
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.046
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 274 SALMNRPTRGERRFAYW 324
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.081
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 346 ERGSGRAPNTQTASPRALADSLMQ 275
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 39.1 bits (87), Expect = 0.14
Identities = 30/87 (34%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Frame = +1
Query: 562 VRGGETRQDYKDTRRFPLEAPSCALLFRPC--RLPDTVVFRLSPXRXSVGAFS*LTL*VS 735
VR GETRQD K P P R+P S + S ++
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 736 QFGXXRSLXXWAVCTNPPFSPTAAPFP 816
F WAV NPPFSPTAAP+P
Sbjct: 83 SFAPS-----WAVSKNPPFSPTAAPYP 104
>UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;
Janthinobacterium sp. Marseille|Rep: Uncharacterized
conserved protein - Janthinobacterium sp. (strain
Marseille) (Minibacterium massiliensis)
Length = 212
Score = 35.5 bits (78), Expect = 1.7
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = -3
Query: 569 PLT*ASIFVMLVRGAEPMEKRQQRGL---FTVPGLLLAFCSHVLSCVIPLILWITVLPPL 399
PLT AS+ + L+ P+ + + RGL T+ G ++A +S V L+L T+L PL
Sbjct: 50 PLTVASLIMFLIANLFPIVEIELRGLRSQTTLTGAVMALAGEGMSLVAMLVLATTLLFPL 109
Query: 398 SELIPL 381
+L+ L
Sbjct: 110 LQLLIL 115
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 35.5 bits (78), Expect = 1.7
Identities = 18/22 (81%), Positives = 18/22 (81%), Gaps = 1/22 (4%)
Frame = -2
Query: 810 RRSGRAERGVRAHSP-XXERTT 748
RRSGRAERGVRAHSP ER T
Sbjct: 19 RRSGRAERGVRAHSPAWSERPT 40
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.3
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 157 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 324
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A5HC74 Cluster: Putative uncharacterized protein; n=1;
Adineta vaga|Rep: Putative uncharacterized protein -
Adineta vaga
Length = 400
Score = 33.9 bits (74), Expect = 5.3
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = -2
Query: 609 ETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWPFAGLLLTCSFLRYPP 430
E GIF GF + L +D C + GG A +T + G+W + G L C+ + PP
Sbjct: 247 EGGGIF-KRKGFYYTMLGIDCCFCQWGGDA--RTFISNNPLGNWTYFGQLNYCADGKAPP 303
Query: 429 DSVD 418
D +D
Sbjct: 304 DHID 307
>UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 3
SCAF15018, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 754
Score = 33.5 bits (73), Expect = 7.1
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +1
Query: 403 GGNTVIHRIRGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETR 582
GG+ V ++GI+ ERT + +P + PR W S+ P + +++GG+ R
Sbjct: 611 GGHGVPGELQGIS-ERTLLELTRGKP-LLSHPRAWFVSLDGKPAAQVRHSIIELQGGQRR 668
Query: 583 QDYKDT 600
DT
Sbjct: 669 PSSNDT 674
>UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer
arietinum|Rep: Reverse transcriptase - Cicer arietinum
(Chickpea) (Garbanzo)
Length = 37
Score = 33.5 bits (73), Expect = 7.1
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 409 NTVIHRIRGITQERTCE 459
NTVIH +GITQERTCE
Sbjct: 21 NTVIHXNQGITQERTCE 37
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.5 bits (73), Expect = 7.1
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -2
Query: 237 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQIN 70
+MNA V + FIAA + +T + AFF L S G ++VSY VW ++
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDLH 77
>UniRef50_A7H8A5 Cluster: Ribonuclease, Rne/Rng family; n=1;
Anaeromyxobacter sp. Fw109-5|Rep: Ribonuclease, Rne/Rng
family - Anaeromyxobacter sp. Fw109-5
Length = 740
Score = 33.1 bits (72), Expect = 9.3
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -3
Query: 734 DTYSVSYEKAPTLXRXGERRXTTVS-GKRQGRNRRAHEGASRGKR 603
D ++ P + GERR G+R GR+R A EG RG R
Sbjct: 241 DAREARADREPKEGKGGERRRDREERGRRDGRDREAREGRERGNR 285
>UniRef50_A3MA42 Cluster: Putative uncharacterized protein; n=1;
Acinetobacter baumannii ATCC 17978|Rep: Putative
uncharacterized protein - Acinetobacter baumannii
(strain ATCC 17978 / NCDC KC 755)
Length = 183
Score = 33.1 bits (72), Expect = 9.3
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = -3
Query: 542 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAA 372
ML A+ + + ++ GL G+ L C H+++ + L ++P L ++I + A
Sbjct: 1 MLYTAAQTLSRGRKSGLMAAFGIFLGGCFHIIAASLGLTTIFQIIPKLYDIIKILGA 57
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 33.1 bits (72), Expect = 9.3
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3
Query: 774 VHEPPVQPDRCAFS 815
+HEPPVQPDRCA S
Sbjct: 1 MHEPPVQPDRCALS 14
>UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase
kinase 10; n=21; Euteleostomi|Rep: Mitogen-activated
protein kinase kinase kinase 10 - Homo sapiens (Human)
Length = 954
Score = 33.1 bits (72), Expect = 9.3
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = -2
Query: 648 GSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWP 475
GS+Q S+ G++P + GFA+ + +F +A GG + +P + P Y S P
Sbjct: 582 GSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPSYLSVP 639
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 762,547,770
Number of Sequences: 1657284
Number of extensions: 14588663
Number of successful extensions: 40310
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 38561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40297
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76652910257
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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