Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_C13
(936 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 190 3e-47
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 123 6e-27
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 93 1e-17
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 4e-09
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 62 2e-08
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 58 3e-07
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 58 4e-07
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 44 0.006
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 44 0.006
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.091
UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4; ... 35 3.4
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 35 3.4
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 6.0
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 6.0
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 190 bits (464), Expect = 3e-47
Identities = 89/103 (86%), Positives = 91/103 (88%)
Frame = +1
Query: 484 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTXRFPLEAPSCALLFRP 663
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDT RFPLEAPSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 664 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPAGLXCTNP 792
CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAP+ CTNP
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNP 104
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 123 bits (297), Expect = 6e-27
Identities = 72/120 (60%), Positives = 77/120 (64%)
Frame = +1
Query: 316 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 495
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 496 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTXRFPLEAPSCALLFRPCRLP 675
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RFPL APSCALLF P LP
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 92.7 bits (220), Expect = 1e-17
Identities = 44/54 (81%), Positives = 46/54 (85%)
Frame = +1
Query: 502 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTXRFPLEAPSCALLFRP 663
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDT RFPL APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 4e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -1
Query: 492 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 379
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 62.1 bits (144), Expect = 2e-08
Identities = 30/56 (53%), Positives = 38/56 (67%)
Frame = -1
Query: 792 GVRAXQPSWSERPTPN*DTYSVSYEKAPRFPKGERRTGIR*AAGSEQESARGSFQG 625
GVRA P+WSERP P+ DT SVSYEKAPRFPKG++ + +G Q R + +G
Sbjct: 27 GVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQV---SGKRQGRNRRAHEG 79
Score = 56.8 bits (131), Expect = 7e-07
Identities = 36/87 (41%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = -2
Query: 833 DQXSTEXXSGRAERGFVXHSPAGANDLHRTEIPTA*AMRKR-HASRREKGGQVSGKRQGR 657
D + S RAERG +SPA + + ++ + K + +K QVSGKRQGR
Sbjct: 13 DDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGKRQGR 72
Query: 656 NRRAHEGASRGKRXVSL*SCRVSPPLT 576
NRRAHEGA+ K SL PPLT
Sbjct: 73 NRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 292 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 459
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 58.0 bits (134), Expect = 3e-07
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +1
Query: 391 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 564
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 565 IDAQVRGGETRQDYKDTXRFPLEAPSCALLFRP 663
I Q + +T+ +YK T FPL++PS +LLF P
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 57.6 bits (133), Expect = 4e-07
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 642 VRSPVPTLPLTGYLSAFLPSGSVALSH 722
+RSPVPTLPLTGYLSAFLPSGSVALSH
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSH 27
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 94 DPDMIRYIDEFGQTTTRMQ 150
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 411 HSKAVIRLSTESGDNAGKNM 470
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 44.0 bits (99), Expect = 0.006
Identities = 28/72 (38%), Positives = 31/72 (43%)
Frame = +1
Query: 577 VRGGETRQDYKDTXRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCR 756
VR GETRQD K P P PPFSL + + GIS RCR
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 757 SFAPAGLXCTNP 792
SFAP+ NP
Sbjct: 83 SFAPSWAVSKNP 94
Score = 37.5 bits (83), Expect = 0.48
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = +3
Query: 690 FLPSGSVALSHXXXXXXXXXXXXXXXXWAVXHEPPFSPTAAXF 818
F +GSVALSH WAV PPFSPTAA +
Sbjct: 61 FSLAGSVALSHSSHSGISARCRSFAPSWAVSKNPPFSPTAAPY 103
Score = 35.5 bits (78), Expect = 2.0
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +2
Query: 605 IKIPXVSPWKLPRALSCSDPAAYRIPVRLSPFGKRGA 715
+KI VS LP ALSCS+PA RIPV PF G+
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPV--PPFSLAGS 66
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 44.0 bits (99), Expect = 0.006
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +2
Query: 218 INKLTTTIAFILCFRFRVEVWEVFSALMNRPTRGERRFAYW 340
+++LT L RF V V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.091
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2
Query: 362 ERGSGRAPNTQTASPRALADSLMQ 291
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 668)
Length = 755
Score = 34.7 bits (76), Expect = 3.4
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -2
Query: 722 MRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKR 618
+R+R A RR GG+ G+R+GRNR+ + RG+R
Sbjct: 355 VRRRAAPRRRHGGEWRGRRRGRNRKRRQ--QRGQR 387
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 34.7 bits (76), Expect = 3.4
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 792 GVRAXQPSWSERPTPN 745
GVRA P+WSERPTPN
Sbjct: 27 GVRAHSPAWSERPTPN 42
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 6.0
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -1
Query: 501 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 379
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 6.0
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -1
Query: 252 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 88
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 798,160,050
Number of Sequences: 1657284
Number of extensions: 16034771
Number of successful extensions: 43901
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 41724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43865
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 85732778670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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