Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_C12
         (934 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    30   0.030
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    27   0.21 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.21 
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    25   0.64 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   4.5  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   5.9  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   5.9  

>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 29.9 bits (64), Expect = 0.030
 Identities = 17/64 (26%), Positives = 33/64 (51%)
 Frame = +2

Query: 377 IQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQDL 556
           +  +H T + +N+N      +  NK    S+ E+RR+ + +A ++ RDA +   D +   
Sbjct: 108 LAQVHGTNNGTNKNMRRLSTTTQNKNDDPSYWEKRRK-NNEAAKRSRDARRAKEDEIAIR 166

Query: 557 XAYL 568
            A+L
Sbjct: 167 CAFL 170


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 27.1 bits (57), Expect = 0.21
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +1

Query: 196 LSYIYNVINVFFIPYIEIMEQGTMNSEK*KIALM*CFILLKFHYNN 333
           L+ IY  I   F PY    +QG  NS +  ++L  CF+ +  HY++
Sbjct: 106 LNGIYEYIMRNF-PYYRENKQGWQNSIRHNLSLNKCFVKVPRHYDD 150


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.1 bits (57), Expect = 0.21
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = -2

Query: 801 FVLVRQPLLIQTRYGMLSFNNLFIICLHYTKSDNIFTQCIALFF 670
           F++    LL    +   + + LF++CL Y     +F  CI  F+
Sbjct: 173 FIIFTMHLLFCCAFIFFNMHLLFLLCLDYFTLHLLFLPCIYYFY 216



 Score = 22.6 bits (46), Expect = 4.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 738 LFIICLHYTKSDNIFTQCIALFF 670
           LF++C++Y      F  CI  F+
Sbjct: 128 LFLLCIYYFVVPLFFLLCIYYFY 150


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 25.4 bits (53), Expect = 0.64
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -1

Query: 451 LVVTTVIFILCVLI 410
           L++T VIF++CVL+
Sbjct: 253 LIITQVIFVICVLV 266


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -1

Query: 451 LVVTTVIFILCVLI 410
           L++T  IFI+CV++
Sbjct: 609 LLITQTIFIICVIV 622


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 14/79 (17%), Positives = 36/79 (45%), Gaps = 16/79 (20%)
 Frame = -1

Query: 733 HNLLALYEERQHLYAMHCALLPVYDAVVTNTGCSQLISEGLQ----------------LC 602
           H +  L +    +Y+M+C L+ +   V +    ++++ +G+                 L 
Sbjct: 268 HMMQQLGKAYSGMYSMYCLLILLTTIVASYGSVTEIMDQGISFKEAGLFMIAFYCMTLLY 327

Query: 601 LVCSQTHHSAXQVGXKVLE 545
           ++C++ HH+  ++G +  E
Sbjct: 328 IICNEGHHATRKMGPEFRE 346


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 14/79 (17%), Positives = 36/79 (45%), Gaps = 16/79 (20%)
 Frame = -1

Query: 733 HNLLALYEERQHLYAMHCALLPVYDAVVTNTGCSQLISEGLQ----------------LC 602
           H +  L +    +Y+M+C L+ +   V +    ++++ +G+                 L 
Sbjct: 268 HMMQQLGKAYSGMYSMYCLLILLTTIVASYGSVTEIMDQGISFKEAGLFMIAFYCMTLLY 327

Query: 601 LVCSQTHHSAXQVGXKVLE 545
           ++C++ HH+  ++G +  E
Sbjct: 328 IICNEGHHATRKMGPEFRE 346


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,197
Number of Sequences: 336
Number of extensions: 4236
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26168549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)