Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_C12
(934 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10010| Best HMM Match : HLH (HMM E-Value=8.5e-09) 40 0.002
SB_40437| Best HMM Match : VapD_N (HMM E-Value=2.4) 37 0.027
SB_9980| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.062
SB_32904| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.082
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 31 1.0
SB_27282| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_43750| Best HMM Match : NAP (HMM E-Value=3.3) 31 1.3
SB_5702| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_49233| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.8
SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14) 31 1.8
SB_44231| Best HMM Match : Ion_trans_2 (HMM E-Value=6.5e-09) 30 2.3
SB_29054| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_55724| Best HMM Match : SURF6 (HMM E-Value=0.62) 29 4.1
SB_23556| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_40771| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_899| Best HMM Match : Alpha_L_fucos (HMM E-Value=0) 29 5.4
SB_54715| Best HMM Match : Hexapep (HMM E-Value=1.2e-05) 29 7.1
SB_49663| Best HMM Match : TolA (HMM E-Value=0.059) 29 7.1
SB_45809| Best HMM Match : Vicilin_N (HMM E-Value=4.5) 29 7.1
SB_39750| Best HMM Match : Borrelia_orfA (HMM E-Value=1.1) 29 7.1
SB_49776| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
>SB_10010| Best HMM Match : HLH (HMM E-Value=8.5e-09)
Length = 227
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +2
Query: 467 FKERRREAHTQAEQKRRDAIKKGYDSLQDLXAYLXSRVMRLATNQAKLQSFRNQL-TTSS 643
+KE RR +H AEQKRR IK G+D L + L S+ + LQ N + +
Sbjct: 16 YKEHRRMSHISAEQKRRCNIKMGFDQLASMVPTLASQKSSKVSKATVLQKNDNMVHLCLA 75
Query: 644 ICYNSVVDRKKSAM 685
+ Y + + +++ +M
Sbjct: 76 VDYTTRLQQERQSM 89
>SB_40437| Best HMM Match : VapD_N (HMM E-Value=2.4)
Length = 89
Score = 36.7 bits (81), Expect = 0.027
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +1
Query: 625 SIDYIQYLLXXXXXXXXXXNALRKDVVALRIMQANYEQIVKA 750
+I+Y+ ++ LRK+V+AL+IM+ NYEQI +A
Sbjct: 5 AIEYVSFMHHQRKKHEEELEKLRKEVLALKIMKQNYEQIARA 46
>SB_9980| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 35.5 bits (78), Expect = 0.062
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +2
Query: 455 SALSFKERRREAHTQAEQKRRDAIK 529
S+ S K+ RR AH+ AEQKRRDAIK
Sbjct: 34 SSSSSKQNRRFAHSVAEQKRRDAIK 58
>SB_32904| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 35.1 bits (77), Expect = 0.082
Identities = 23/98 (23%), Positives = 44/98 (44%)
Frame = +2
Query: 167 NSGHEVLVQDYLIFIMLSMYSSYPT*K*WNKAP*TPKSERSH*CNVLFY*SFIITINIPI 346
N ++ + D+L FI + +Y + + ++ P KSE + + +I +P
Sbjct: 53 NHPRDICIPDWLSFIAVRVYRYFAKKRVSSEQPSNQKSESWRFKSSRMFVYILIAFLVPY 112
Query: 347 CILVCGSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASA 460
+ C SS S + + SSSN N+ S + +S+
Sbjct: 113 --VTCTSSSSSNSSRSSSSSSNSNSNSSSSSSSSSSSS 148
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 31.5 bits (68), Expect = 1.0
Identities = 20/83 (24%), Positives = 40/83 (48%)
Frame = +2
Query: 428 EDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQDLXAYLXSRVMRLATNQAK 607
E+D N+ SA++ K E + + +D +KK + + + A L +R+ L +++
Sbjct: 1867 ENDRLQNEISAINRKLVYLETRNENLESEKDRLKKDFANSKKESAELRARLEALLNEKSR 1926
Query: 608 LQSFRNQLTTSSICYNSVVDRKK 676
LQ+ + Y S +D K+
Sbjct: 1927 LQNEVTLVNRKYTEYRSSIDDKR 1949
>SB_27282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 644
Score = 31.5 bits (68), Expect = 1.0
Identities = 14/23 (60%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = +2
Query: 395 TPSSS-NQNTEDEDDSGDNKASA 460
TPSSS N +T+D+DD DNK +A
Sbjct: 494 TPSSSDNDDTQDDDDKSDNKPNA 516
>SB_43750| Best HMM Match : NAP (HMM E-Value=3.3)
Length = 514
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +2
Query: 341 PICILVCGSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRD 520
P + CGSSG + + P+ + E+ + S + + +R+RE Q EQ+R+
Sbjct: 431 PPGVWTCGSSGRKKRQAEMPAPVSTVQEETERSINMCPPGIWVCDRKRELKRQREQRRQA 490
Query: 521 AIKK 532
A++K
Sbjct: 491 AMEK 494
>SB_5702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 362 GSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQ 508
G S SI +Q P Q+ +D +D D+ A+ SF+ +AH A Q
Sbjct: 2 GHSASIAKKYQAPK---QHVDDTNDEVDSLATVSSFRPTSPDAHNDARQ 47
>SB_49233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 30.7 bits (66), Expect = 1.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 368 SGSIQNIHQTPSSSNQNTEDEDDSGDNKA 454
SG+++ QTPS +N NT DSG A
Sbjct: 4 SGALKEEQQTPSDTNNNTNGSSDSGGGGA 32
>SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14)
Length = 856
Score = 30.7 bits (66), Expect = 1.8
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = -1
Query: 529 LNCISSFLLCLCVSFPSSLFETECRCL 449
LNC +++ +C+C + S+++E+ RCL
Sbjct: 637 LNCQTNYFVCICDARESTIYESLSRCL 663
>SB_44231| Best HMM Match : Ion_trans_2 (HMM E-Value=6.5e-09)
Length = 441
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +2
Query: 350 ILVCGSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDA 523
IL S +++ HQ +S+ + + D A+ K+RR E QA +KR +A
Sbjct: 351 ILQVVMSSVVEDFHQNLTSTIERLRERHDQDMRNYIAILKKQRRNENKYQAYEKREEA 408
>SB_29054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 515
Score = 30.3 bits (65), Expect = 2.3
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Frame = +2
Query: 407 SNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQDLXAYLXSRVMR 586
++Q + DD + A AL+ +E +REA +A+ + K+G + + + R
Sbjct: 291 ADQMQQKVDDEDERIAKALAEREAKREAEERAKFEADMKEKRG---IHEHRISMMRESER 347
Query: 587 LATNQAK--LQSFRNQLTTSSICYNSVVDRKKSAMHCVKMLSLF 712
A +AK + R ++ + + + V++K +H K L F
Sbjct: 348 KAAEEAKRDQEILRKRVESDKLYHAKQVEKKLEKLHETKNLKTF 391
>SB_55724| Best HMM Match : SURF6 (HMM E-Value=0.62)
Length = 1105
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/64 (20%), Positives = 28/64 (43%)
Frame = +2
Query: 383 NIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQDLXA 562
N H + S +++ T+D + + + +SF H A R D + L+++
Sbjct: 188 NTHSSLSDTSEKTKDRQQTSAKQGNTMSFSSIDNSKHGHANTTREDPRLRHLQKLENVQK 247
Query: 563 YLXS 574
++ S
Sbjct: 248 HIES 251
>SB_23556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 671
Score = 29.5 bits (63), Expect = 4.1
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +3
Query: 105 KFDFSITLRKCYVTTWFKSDLIRVMKYLSKTILYL*CYQCILHTLHRNNGTRHHELRKVK 284
K +F+ L + T + V+ Y+S ++ YQ I H N TR+H++ K
Sbjct: 253 KMEFTARLTLNWKFTHLDQRGLSVIGYMSNELVGSSLYQNI-HPNDLENITRYHKILVYK 311
Query: 285 DRINVMFY 308
R+N +Y
Sbjct: 312 GRVNTCYY 319
>SB_40771| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 553
Score = 29.1 bits (62), Expect = 5.4
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 395 TPSSSNQNTEDEDDSGDNKASAL-SFKERRREAHTQAEQKRRDAIKKGYDSLQDL 556
TP S+ + + + + ++ S S R+EAH + E+KRR+ I + + L+ +
Sbjct: 452 TPRSTKRKRDSINSAVNHSTSKTPSTPAERKEAHLEKERKRRERIARSWFLLRSM 506
>SB_899| Best HMM Match : Alpha_L_fucos (HMM E-Value=0)
Length = 1127
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +2
Query: 398 PSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQ 550
P + N+ D+DD D F+ + ++ ++ K+R + KKG++ Q
Sbjct: 1038 PGAKNKKKHDDDDDDDEGGGDDKFEPKHKKKG-RSSSKKRHSRKKGHEEQQ 1087
>SB_54715| Best HMM Match : Hexapep (HMM E-Value=1.2e-05)
Length = 1143
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 392 QTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKK 532
+T S +T D D S D+ ++ S +ER + H + ++KR+ IKK
Sbjct: 745 ETKKSRKYSTTDSDCSSDDGENSDSSRERSIKKH-KKKKKRKKKIKK 790
>SB_49663| Best HMM Match : TolA (HMM E-Value=0.059)
Length = 591
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 477 EEGKLTHRQSRKEEMQLRKAMIHSKTLXPT 566
+EGK ++SRK+E Q +K I +K PT
Sbjct: 494 QEGKQRKKESRKQEEQNKKEQILNKMAEPT 523
>SB_45809| Best HMM Match : Vicilin_N (HMM E-Value=4.5)
Length = 215
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 419 TEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDS 544
+ D DD K S+ S K+R R + +++ ++RR + + DS
Sbjct: 5 SSDSDDDRRRKRSSKSSKKRDRRSRSRSRERRRRSKSRDRDS 46
>SB_39750| Best HMM Match : Borrelia_orfA (HMM E-Value=1.1)
Length = 810
Score = 28.7 bits (61), Expect = 7.1
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +2
Query: 398 PSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSL 547
PSS + S NK S +SF + + E+++++ + K Y ++
Sbjct: 371 PSSKSHKKSSSKSSSSNKLSKISFLRKLMDGKILTEEQKKEELAKLYAAI 420
>SB_49776| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 28.3 bits (60), Expect = 9.4
Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = -1
Query: 511 FLLCLCVSFPSSLFE-TECRC 452
FLL +C SF SSLF T C+C
Sbjct: 17 FLLRICTSFGSSLFPGTSCQC 37
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,741,174
Number of Sequences: 59808
Number of extensions: 480034
Number of successful extensions: 1960
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1913
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2717121828
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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