Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_C10
(899 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.) 108 7e-24
SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 92 5e-19
SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 8e-10
SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 58 7e-09
SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1) 52 5e-07
SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_15292| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.73
SB_56768| Best HMM Match : VWA (HMM E-Value=0.0042) 29 3.9
SB_52108| Best HMM Match : DUF1053 (HMM E-Value=6) 29 3.9
SB_16774| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 4.7
SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061) 29 5.1
SB_34637| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_9539| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_6739| Best HMM Match : RCC1 (HMM E-Value=1.6e-34) 28 8.9
SB_17878| Best HMM Match : Drf_FH1 (HMM E-Value=0.022) 25 9.7
>SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 108 bits (259), Expect = 7e-24
Identities = 56/124 (45%), Positives = 75/124 (60%)
Frame = +2
Query: 353 VATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 532
+AT+KL +G MPV+ LGT P V+ AI GYR ID AY Y NEK +G A++
Sbjct: 1 MATVKLNNGLEMPVLGLGTWKSKPGQVENAVKFAIKEGYRHIDCAYAYRNEKEVGDALRE 60
Query: 533 KIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKEGNS 712
+ V R +LFI KLW+T H V + C SL DLGL++ DL+LIH P+S ++G+
Sbjct: 61 LLGS-VVERKDLFITSKLWNTKHNPKDVRSNCVDSLKDLGLDYLDLYLIHWPLSFRDGDE 119
Query: 713 SIPK 724
PK
Sbjct: 120 FFPK 123
>SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 407
Score = 92.3 bits (219), Expect = 5e-19
Identities = 42/88 (47%), Positives = 60/88 (68%)
Frame = +2
Query: 443 VETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKLWSTFHRTDLVET 622
V AI++GYR ID A IYGNE IG+A+ + +G V+R+ELF+ KLW H D V
Sbjct: 71 VRLAIELGYRHIDCAEIYGNEGEIGEALSEVLTEGKVKREELFVTSKLWCDSHHPDDVLP 130
Query: 623 ACRISLADLGLEFFDLFLIHNPMSLKEG 706
AC+ +L +L L++ DL+LIH P++ K+G
Sbjct: 131 ACQATLKNLQLDYLDLYLIHIPVAFKKG 158
Score = 38.3 bits (85), Expect = 0.008
Identities = 26/75 (34%), Positives = 40/75 (53%)
Frame = +2
Query: 443 VETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKLWSTFHRTDLVET 622
V A ++GYR ID A I+GNE G+A+ + G V+R+E G W + + V
Sbjct: 18 VRLAAELGYRLIDCAEIHGNE---GEALSGVLTKGKVKREE---CGSTWQS--SKEEVGN 69
Query: 623 ACRISLADLGLEFFD 667
A R+++ +LG D
Sbjct: 70 AVRLAI-ELGYRHID 83
>SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 61.7 bits (143), Expect = 8e-10
Identities = 43/111 (38%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Frame = +2
Query: 356 ATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYG-NEKLIGKAIKN 532
A + L G MPV+ GTA L T +V+TA++ GYR IDTA Y +E + KAI
Sbjct: 327 ADVLLASGYTMPVMGFGTATLGED-TLSVVKTALETGYRLIDTAQGYPLSEPQVAKAIA- 384
Query: 533 KIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHN 685
D G R+D +FI+ KL + + + +SL L ++ DLFLIH+
Sbjct: 385 --DSGIPRKD-IFIITKLHPRYLGYEPTLKSVEMSLRALSTDYIDLFLIHS 432
>SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 333
Score = 58.4 bits (135), Expect = 7e-09
Identities = 37/112 (33%), Positives = 62/112 (55%)
Frame = +2
Query: 356 ATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNK 535
+T + DG +P++ LG + + + V A++ GYR IDTA Y NE+ +G+A++
Sbjct: 66 STRIMNDGRKIPLLGLGAHDIHSK---QAVLWALESGYRLIDTASRYHNEQSVGEAVR-- 120
Query: 536 IDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPM 691
+ R E++++ K++ T H A SL LGL + DL+LIH P+
Sbjct: 121 --CSNIPRCEIYVVTKVYFTEHGYKETMDAFYKSLTRLGLGYVDLYLIHFPV 170
>SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1)
Length = 93
Score = 52.4 bits (120), Expect = 5e-07
Identities = 33/94 (35%), Positives = 51/94 (54%)
Frame = +2
Query: 368 LRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 547
L DG +P LG L + T + V A++ GYR IDTA Y NEK +G+A++ +
Sbjct: 3 LSDGYKIPRFGLGLYDLDEKHTKQAVLWALENGYRMIDTAASYNNEKRVGEALR----ES 58
Query: 548 TVRRDELFIMGKLWSTFHRTDLVETACRISLADL 649
V R E++++ K++ T H + A SL+ L
Sbjct: 59 AVPRSEVYLVTKVYHTDHGYEKTMKAYDRSLSAL 92
>SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 48.0 bits (109), Expect = 1e-05
Identities = 26/79 (32%), Positives = 43/79 (54%)
Frame = +2
Query: 452 AIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKLWSTFHRTDLVETACR 631
A+ GYR +DTA IY NEK +G A++ ++R+++++ KL + +
Sbjct: 53 ALKNGYRMLDTADIYQNEKEVGSAVRK----SGLKREDIYVTTKLKPSEEGHSNALKYAK 108
Query: 632 ISLADLGLEFFDLFLIHNP 688
S+ L + + DLFLIH P
Sbjct: 109 ESIKKLDIGYVDLFLIHTP 127
>SB_15292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 983
Score = 31.9 bits (69), Expect = 0.73
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 710 CCLPSTTSDCG*GRGRKTPSPGLPVKSCRP 621
C P ++CG GRG + S LP +SC P
Sbjct: 283 CIFPENDTECGGGRGFEEGSRLLPYESCHP 312
>SB_56768| Best HMM Match : VWA (HMM E-Value=0.0042)
Length = 815
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +2
Query: 230 SGQRRLDNGKQKRDTGDLTDEQYKTRIAELNEAKLKGSVKEVATLK 367
S R+D K RD L E++ RIA LN K KG ++ A +K
Sbjct: 90 SSASRIDGKKVIRDLAGLLRERFDERIAALNAIK-KGVEEDYAAVK 134
>SB_52108| Best HMM Match : DUF1053 (HMM E-Value=6)
Length = 349
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -2
Query: 574 NEKLVSPHGAVVNLVLDRFSYELFVAVNISGIYSSVAHI 458
N++LV+ H VLD+F+ E FVA + + SVA +
Sbjct: 66 NQELVTAHDDAQENVLDQFADEAFVASAFAAMGESVASV 104
>SB_16774| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 25.4 bits (53), Expect(2) = 4.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 629 CRPSPPDRCDGMYSTIYP 576
C PS P +CDG + +P
Sbjct: 225 CHPSTPTKCDGPVQSKFP 242
Score = 22.2 bits (45), Expect(2) = 4.7
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -1
Query: 713 NCCLPSTTSDC 681
NCC PST + C
Sbjct: 223 NCCHPSTPTKC 233
>SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061)
Length = 2735
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +1
Query: 385 HAGHSLGHSFASSTVNNGNSG 447
H GHS GHSF S V G+SG
Sbjct: 979 HPGHSFGHSFGKSKV-EGSSG 998
>SB_34637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 202
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = -3
Query: 774 PGVPCSRTXEYWITDDIFGIELLPSFNDIGLWMRKRSKNSKPRSASEILQAVST 613
P P + W++ D F + P+F + R R K+SK + Q ST
Sbjct: 71 PVSPEEEENDKWLSADFFAGGVEPAFVEQTFKKRSRDKDSKDEKIEQFTQPTST 124
>SB_9539| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1642
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Frame = +2
Query: 227 GSGQRRLDNGKQKRDTGDLT---DEQYKTRIAELNEA 328
G G+ +D+G+ D+G+LT D ++K+ EL+E+
Sbjct: 1367 GGGELTIDSGELTIDSGELTIGGDPEFKSEYRELSES 1403
>SB_6739| Best HMM Match : RCC1 (HMM E-Value=1.6e-34)
Length = 1790
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = -3
Query: 774 PGVPCSRTXEYWITDDIFGIELLPSFNDIGLWMRKRSKNSKPRSASEILQAVST 613
P P + W++ D F + P+F + R R K+SK + Q ST
Sbjct: 1342 PVSPEEEENDKWLSADFFAGGVEPAFVEQTFKKRSRDKDSKDEKIEQFTQPTST 1395
>SB_17878| Best HMM Match : Drf_FH1 (HMM E-Value=0.022)
Length = 664
Score = 25.4 bits (53), Expect(2) = 9.7
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -1
Query: 701 PSTTSDCG*GRGRKTPSPGLPVKSCRPSPPDRC 603
P+ S G G TPSP L C PS C
Sbjct: 212 PAERSLKGAKGGDGTPSPSLSTAPCEPSTSSSC 244
Score = 21.0 bits (42), Expect(2) = 9.7
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -1
Query: 707 CLPSTTSDCG 678
C PST+S CG
Sbjct: 172 CEPSTSSSCG 181
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,368,420
Number of Sequences: 59808
Number of extensions: 534753
Number of successful extensions: 3838
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3830
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2586032617
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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