Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_C09
         (914 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    30   0.11 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   2.4  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   3.2  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   9.8  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 29.9 bits (64), Expect = 0.11
 Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
 Frame = -2

Query: 733 TPXPPXLXGGXGPXGAPGXXG--GSPXXP 653
           TP PP   G  GP G PG  G  G P  P
Sbjct: 147 TPGPPGYPGDVGPKGEPGPKGPAGHPGAP 175



 Score = 24.2 bits (50), Expect = 5.6
 Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 2/28 (7%)
 Frame = -2

Query: 730 PXPPXLXGGXGPXGAPGXXG--GSPXXP 653
           P PP   G  G  G PG  G  G P  P
Sbjct: 718 PGPPGFNGPKGDKGLPGLAGPAGIPGAP 745



 Score = 23.4 bits (48), Expect = 9.8
 Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 2/21 (9%)
 Frame = -2

Query: 709 GGXGPXGAPGXXG--GSPXXP 653
           G  GP GAPG  G  G+P  P
Sbjct: 69  GPVGPPGAPGRDGMPGAPGLP 89


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -2

Query: 721 PXLXGGXGPXGAPGXXGGSPXXP 653
           P   GG    GAPG  GGS   P
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGP 222


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -3

Query: 729 PPPXXXXGVXGLXGPPGXXGGPPXTPXFXGDGGXR 625
           P P    G  G  G PG   G P TP   G+ G +
Sbjct: 240 PGPQGEVGPRGFPGRPGEK-GVPGTPGVRGERGDK 273



 Score = 25.0 bits (52), Expect = 3.2
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -2

Query: 721 PXLXGGXGPXGAPGXXGGSPXXP 653
           P   G  GP GAPG   G P  P
Sbjct: 391 PGQPGIAGPAGAPGGGEGRPGAP 413


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 632 PPSPXXXGVXGGPP 673
           PP P   G  GGPP
Sbjct: 300 PPMPMQGGAPGGPP 313


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 334,591
Number of Sequences: 2352
Number of extensions: 2894
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99228240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)