Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_C09
(914 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC046645-1|AAH46645.1| 215|Homo sapiens CCBE1 protein protein. 34 0.83
AY358347-1|AAQ88713.1| 406|Homo sapiens VPPP1921 protein. 34 0.83
AB075863-1|BAB85569.1| 418|Homo sapiens KIAA1983 protein protein. 34 0.83
U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5 ... 33 1.4
U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5 ... 33 1.4
M90464-1|AAA52046.1| 910|Homo sapiens alpha-5 type IV collagen ... 33 1.4
AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha ... 33 1.4
AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha ... 33 1.4
AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha ... 33 1.4
X80031-1|CAA56335.1| 1670|Homo sapiens type IV collagen alpha 3 ... 32 3.3
AJ288487-1|CAC36101.1| 1670|Homo sapiens alpha3 type IV collagen... 32 3.3
AC097662-1|AAY24251.1| 1084|Homo sapiens unknown protein. 32 3.3
M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collag... 31 4.4
D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain... 31 4.4
DQ067453-1|AAZ23040.1| 1262|Homo sapiens diaphanous-1 protein. 31 4.4
DQ067452-1|AAZ23039.1| 229|Homo sapiens diaphanous-1 protein. 31 4.4
BC117257-1|AAI17258.1| 1262|Homo sapiens diaphanous homolog 1 (D... 31 4.4
BC008760-1|AAH08760.3| 591|Homo sapiens COL5A1 protein protein. 31 4.4
AY363395-1|AAQ63049.1| 1272|Homo sapiens diaphanous 1 protein. 31 4.4
AY360322-1|AAQ64023.1| 179|Homo sapiens diaphanous 1 protein. 31 4.4
AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1... 31 4.4
AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1... 31 4.4
AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1... 31 4.4
AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein. 31 4.4
AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V coll... 31 4.4
AB209482-1|BAD92719.1| 1299|Homo sapiens Diaphanous 1 variant pr... 31 4.4
Y00706-1|CAA68698.1| 1212|Homo sapiens protein ( Human mRNA for ... 31 7.7
X05561-1|CAA29075.1| 944|Homo sapiens protein ( Human mRNA for ... 31 7.7
M26576-1|AAA53098.1| 1669|Homo sapiens alpha-1 type IV collagen ... 31 7.7
BC151220-1|AAI51221.1| 1669|Homo sapiens COL4A1 protein protein. 31 7.7
BC142626-1|AAI42627.1| 519|Homo sapiens COL4A1 protein protein. 31 7.7
BC063833-1|AAH63833.1| 1336|Homo sapiens collagen, type XVIII, a... 31 7.7
AY484971-3|AAR83297.1| 1516|Homo sapiens type XVIII collagen mid... 31 7.7
AY484971-2|AAR83296.1| 1751|Homo sapiens type XVIII collagen lon... 31 7.7
AY484971-1|AAR83298.1| 1336|Homo sapiens type XVIII collagen sho... 31 7.7
AL390755-2|CAM20295.1| 1318|Homo sapiens collagen type IV alpha ... 31 7.7
AL390755-1|CAH74130.1| 1669|Homo sapiens collagen type IV alpha ... 31 7.7
AL163302-2|CAB90482.1| 1519|Homo sapiens human type XVIII collag... 31 7.7
AL161773-2|CAM14222.1| 1318|Homo sapiens collagen type IV alpha ... 31 7.7
AL161773-1|CAH71365.1| 1669|Homo sapiens collagen type IV alpha ... 31 7.7
AF018082-1|AAC39659.1| 1336|Homo sapiens type XVIII collagen pro... 31 7.7
AF018081-1|AAC39658.1| 1516|Homo sapiens type XVIII collagen pro... 31 7.7
>BC046645-1|AAH46645.1| 215|Homo sapiens CCBE1 protein protein.
Length = 215
Score = 33.9 bits (74), Expect = 0.83
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = -2
Query: 730 PXPPXLXGGXGPXGAPGXXGGSPXXP 653
P PP L GG GP G+PG GSP P
Sbjct: 55 PGPPGLPGGQGPPGSPGPK-GSPGFP 79
>AY358347-1|AAQ88713.1| 406|Homo sapiens VPPP1921 protein.
Length = 406
Score = 33.9 bits (74), Expect = 0.83
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = -2
Query: 730 PXPPXLXGGXGPXGAPGXXGGSPXXP 653
P PP L GG GP G+PG GSP P
Sbjct: 246 PGPPGLPGGQGPPGSPGPK-GSPGFP 270
>AB075863-1|BAB85569.1| 418|Homo sapiens KIAA1983 protein protein.
Length = 418
Score = 33.9 bits (74), Expect = 0.83
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = -2
Query: 730 PXPPXLXGGXGPXGAPGXXGGSPXXP 653
P PP L GG GP G+PG GSP P
Sbjct: 258 PGPPGLPGGQGPPGSPGPK-GSPGFP 282
>U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5
chain protein.
Length = 1685
Score = 33.1 bits (72), Expect = 1.4
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -3
Query: 729 PPPXXXXGVXGLXGPPGXXG--GPPXTPXFXGDGG 631
P P G G+ GPPG G GPP P F G G
Sbjct: 71 PGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPG 105
>U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5
chain protein.
Length = 1691
Score = 33.1 bits (72), Expect = 1.4
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -3
Query: 729 PPPXXXXGVXGLXGPPGXXG--GPPXTPXFXGDGG 631
P P G G+ GPPG G GPP P F G G
Sbjct: 71 PGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPG 105
>M90464-1|AAA52046.1| 910|Homo sapiens alpha-5 type IV collagen
protein.
Length = 910
Score = 33.1 bits (72), Expect = 1.4
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -3
Query: 729 PPPXXXXGVXGLXGPPGXXG--GPPXTPXFXGDGG 631
P P G G+ GPPG G GPP P F G G
Sbjct: 71 PGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPG 105
>AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 33.1 bits (72), Expect = 1.4
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -3
Query: 729 PPPXXXXGVXGLXGPPGXXG--GPPXTPXFXGDGG 631
P P G G+ GPPG G GPP P F G G
Sbjct: 71 PGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPG 105
>AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 33.1 bits (72), Expect = 1.4
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -3
Query: 729 PPPXXXXGVXGLXGPPGXXG--GPPXTPXFXGDGG 631
P P G G+ GPPG G GPP P F G G
Sbjct: 71 PGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPG 105
>AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 33.1 bits (72), Expect = 1.4
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -3
Query: 729 PPPXXXXGVXGLXGPPGXXG--GPPXTPXFXGDGG 631
P P G G+ GPPG G GPP P F G G
Sbjct: 71 PGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPG 105
>X80031-1|CAA56335.1| 1670|Homo sapiens type IV collagen alpha 3 chain
protein.
Length = 1670
Score = 31.9 bits (69), Expect = 3.3
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 708 GVXGLXGPPGXXGGPPXTPXFXGDGG 631
G+ GL GPPG GPP P F G G
Sbjct: 1125 GIKGLLGPPGIR-GPPGLPGFPGSPG 1149
>AJ288487-1|CAC36101.1| 1670|Homo sapiens alpha3 type IV collagen
protein.
Length = 1670
Score = 31.9 bits (69), Expect = 3.3
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 708 GVXGLXGPPGXXGGPPXTPXFXGDGG 631
G+ GL GPPG GPP P F G G
Sbjct: 1125 GIKGLLGPPGIR-GPPGLPGFPGSPG 1149
>AC097662-1|AAY24251.1| 1084|Homo sapiens unknown protein.
Length = 1084
Score = 31.9 bits (69), Expect = 3.3
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 708 GVXGLXGPPGXXGGPPXTPXFXGDGG 631
G+ GL GPPG GPP P F G G
Sbjct: 539 GIKGLLGPPGIR-GPPGLPGFPGSPG 563
>M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collagen
protein.
Length = 1838
Score = 31.5 bits (68), Expect = 4.4
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = -3
Query: 729 PPPXXXXGVXGLXGPPGXXG--GPPXTPXFXGDGGXR 625
P P G+ G GP G G GPP P GD G +
Sbjct: 1443 PGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPK 1479
>D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain
precursor protein.
Length = 1838
Score = 31.5 bits (68), Expect = 4.4
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = -3
Query: 729 PPPXXXXGVXGLXGPPGXXG--GPPXTPXFXGDGGXR 625
P P G+ G GP G G GPP P GD G +
Sbjct: 1443 PGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPK 1479
>DQ067453-1|AAZ23040.1| 1262|Homo sapiens diaphanous-1 protein.
Length = 1262
Score = 31.5 bits (68), Expect = 4.4
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +2
Query: 632 PPSPXXXGVXGGPPXXPGGPXRPXTPXKXXGGG 730
PP P G+ PP PGGP P P G G
Sbjct: 695 PPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPG 727
>DQ067452-1|AAZ23039.1| 229|Homo sapiens diaphanous-1 protein.
Length = 229
Score = 31.5 bits (68), Expect = 4.4
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +2
Query: 632 PPSPXXXGVXGGPPXXPGGPXRPXTPXKXXGGG 730
PP P G+ PP PGGP P P G G
Sbjct: 89 PPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPG 121
>BC117257-1|AAI17258.1| 1262|Homo sapiens diaphanous homolog 1
(Drosophila) protein.
Length = 1262
Score = 31.5 bits (68), Expect = 4.4
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +2
Query: 632 PPSPXXXGVXGGPPXXPGGPXRPXTPXKXXGGG 730
PP P G+ PP PGGP P P G G
Sbjct: 695 PPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPG 727
>BC008760-1|AAH08760.3| 591|Homo sapiens COL5A1 protein protein.
Length = 591
Score = 31.5 bits (68), Expect = 4.4
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = -3
Query: 729 PPPXXXXGVXGLXGPPGXXG--GPPXTPXFXGDGGXR 625
P P G+ G GP G G GPP P GD G +
Sbjct: 196 PGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPK 232
>AY363395-1|AAQ63049.1| 1272|Homo sapiens diaphanous 1 protein.
Length = 1272
Score = 31.5 bits (68), Expect = 4.4
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +2
Query: 632 PPSPXXXGVXGGPPXXPGGPXRPXTPXKXXGGG 730
PP P G+ PP PGGP P P G G
Sbjct: 705 PPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPG 737
>AY360322-1|AAQ64023.1| 179|Homo sapiens diaphanous 1 protein.
Length = 179
Score = 31.5 bits (68), Expect = 4.4
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +2
Query: 632 PPSPXXXGVXGGPPXXPGGPXRPXTPXKXXGGG 730
PP P G+ PP PGGP P P G G
Sbjct: 89 PPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPG 121
>AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 31.5 bits (68), Expect = 4.4
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = -3
Query: 729 PPPXXXXGVXGLXGPPGXXG--GPPXTPXFXGDGGXR 625
P P G+ G GP G G GPP P GD G +
Sbjct: 1443 PGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPK 1479
>AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 31.5 bits (68), Expect = 4.4
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = -3
Query: 729 PPPXXXXGVXGLXGPPGXXG--GPPXTPXFXGDGGXR 625
P P G+ G GP G G GPP P GD G +
Sbjct: 1443 PGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPK 1479
>AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 31.5 bits (68), Expect = 4.4
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = -3
Query: 729 PPPXXXXGVXGLXGPPGXXG--GPPXTPXFXGDGGXR 625
P P G+ G GP G G GPP P GD G +
Sbjct: 1443 PGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPK 1479
>AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein.
Length = 1248
Score = 31.5 bits (68), Expect = 4.4
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +2
Query: 632 PPSPXXXGVXGGPPXXPGGPXRPXTPXKXXGGG 730
PP P G+ PP PGGP P P G G
Sbjct: 684 PPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPG 716
>AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V collagen
variant protein.
Length = 1792
Score = 31.5 bits (68), Expect = 4.4
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = -3
Query: 729 PPPXXXXGVXGLXGPPGXXG--GPPXTPXFXGDGGXR 625
P P G+ G GP G G GPP P GD G +
Sbjct: 1397 PGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPK 1433
>AB209482-1|BAD92719.1| 1299|Homo sapiens Diaphanous 1 variant
protein.
Length = 1299
Score = 31.5 bits (68), Expect = 4.4
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +2
Query: 632 PPSPXXXGVXGGPPXXPGGPXRPXTPXKXXGGG 730
PP P G+ PP PGGP P P G G
Sbjct: 732 PPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPG 764
>Y00706-1|CAA68698.1| 1212|Homo sapiens protein ( Human mRNA for
alpha1 chain of basement membrane (type IV) collagen.in
neoplastic tissue). ).
Length = 1212
Score = 30.7 bits (66), Expect = 7.7
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = -2
Query: 733 TPXPPXLXGGXGPXGAPGXXG--GSPXXP 653
TP PP L G GP G PG G G P P
Sbjct: 138 TPGPPGLPGLQGPVGPPGFTGPPGPPGPP 166
>X05561-1|CAA29075.1| 944|Homo sapiens protein ( Human mRNA for
alpha-1 chain of collagen IV N-terminus. ).
Length = 944
Score = 30.7 bits (66), Expect = 7.7
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = -2
Query: 733 TPXPPXLXGGXGPXGAPGXXG--GSPXXP 653
TP PP L G GP G PG G G P P
Sbjct: 183 TPGPPGLPGLQGPVGPPGFTGPPGPPGPP 211
>M26576-1|AAA53098.1| 1669|Homo sapiens alpha-1 type IV collagen
protein.
Length = 1669
Score = 30.7 bits (66), Expect = 7.7
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = -2
Query: 733 TPXPPXLXGGXGPXGAPGXXG--GSPXXP 653
TP PP L G GP G PG G G P P
Sbjct: 183 TPGPPGLPGLQGPVGPPGFTGPPGPPGPP 211
>BC151220-1|AAI51221.1| 1669|Homo sapiens COL4A1 protein protein.
Length = 1669
Score = 30.7 bits (66), Expect = 7.7
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = -2
Query: 733 TPXPPXLXGGXGPXGAPGXXG--GSPXXP 653
TP PP L G GP G PG G G P P
Sbjct: 183 TPGPPGLPGLQGPVGPPGFTGPPGPPGPP 211
>BC142626-1|AAI42627.1| 519|Homo sapiens COL4A1 protein protein.
Length = 519
Score = 30.7 bits (66), Expect = 7.7
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = -2
Query: 733 TPXPPXLXGGXGPXGAPGXXG--GSPXXP 653
TP PP L G GP G PG G G P P
Sbjct: 183 TPGPPGLPGLQGPVGPPGFTGPPGPPGPP 211
>BC063833-1|AAH63833.1| 1336|Homo sapiens collagen, type XVIII,
alpha 1 protein.
Length = 1336
Score = 30.7 bits (66), Expect = 7.7
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = -3
Query: 729 PPPXXXXGVXGLXGPPGXXG--GPPXTPXFXGDGG 631
P P GV G GPPG G GPP P G G
Sbjct: 516 PGPAGLPGVPGREGPPGFPGLPGPPGPPGREGPPG 550
>AY484971-3|AAR83297.1| 1516|Homo sapiens type XVIII collagen middle
variant protein.
Length = 1516
Score = 30.7 bits (66), Expect = 7.7
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = -3
Query: 729 PPPXXXXGVXGLXGPPGXXG--GPPXTPXFXGDGG 631
P P GV G GPPG G GPP P G G
Sbjct: 696 PGPAGLPGVPGREGPPGFPGLPGPPGPPGREGPPG 730
>AY484971-2|AAR83296.1| 1751|Homo sapiens type XVIII collagen long
variant protein.
Length = 1751
Score = 30.7 bits (66), Expect = 7.7
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = -3
Query: 729 PPPXXXXGVXGLXGPPGXXG--GPPXTPXFXGDGG 631
P P GV G GPPG G GPP P G G
Sbjct: 931 PGPAGLPGVPGREGPPGFPGLPGPPGPPGREGPPG 965
>AY484971-1|AAR83298.1| 1336|Homo sapiens type XVIII collagen short
variant protein.
Length = 1336
Score = 30.7 bits (66), Expect = 7.7
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = -3
Query: 729 PPPXXXXGVXGLXGPPGXXG--GPPXTPXFXGDGG 631
P P GV G GPPG G GPP P G G
Sbjct: 516 PGPAGLPGVPGREGPPGFPGLPGPPGPPGREGPPG 550
>AL390755-2|CAM20295.1| 1318|Homo sapiens collagen type IV alpha 1
protein.
Length = 1318
Score = 30.7 bits (66), Expect = 7.7
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = -2
Query: 733 TPXPPXLXGGXGPXGAPGXXG--GSPXXP 653
TP PP L G GP G PG G G P P
Sbjct: 183 TPGPPGLPGLQGPVGPPGFTGPPGPPGPP 211
>AL390755-1|CAH74130.1| 1669|Homo sapiens collagen type IV alpha 1
protein.
Length = 1669
Score = 30.7 bits (66), Expect = 7.7
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = -2
Query: 733 TPXPPXLXGGXGPXGAPGXXG--GSPXXP 653
TP PP L G GP G PG G G P P
Sbjct: 183 TPGPPGLPGLQGPVGPPGFTGPPGPPGPP 211
>AL163302-2|CAB90482.1| 1519|Homo sapiens human type XVIII collagen
protein.
Length = 1519
Score = 30.7 bits (66), Expect = 7.7
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = -3
Query: 729 PPPXXXXGVXGLXGPPGXXG--GPPXTPXFXGDGG 631
P P GV G GPPG G GPP P G G
Sbjct: 696 PGPAGLPGVPGREGPPGFPGLPGPPGPPGREGPPG 730
>AL161773-2|CAM14222.1| 1318|Homo sapiens collagen type IV alpha 1
protein.
Length = 1318
Score = 30.7 bits (66), Expect = 7.7
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = -2
Query: 733 TPXPPXLXGGXGPXGAPGXXG--GSPXXP 653
TP PP L G GP G PG G G P P
Sbjct: 183 TPGPPGLPGLQGPVGPPGFTGPPGPPGPP 211
>AL161773-1|CAH71365.1| 1669|Homo sapiens collagen type IV alpha 1
protein.
Length = 1669
Score = 30.7 bits (66), Expect = 7.7
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = -2
Query: 733 TPXPPXLXGGXGPXGAPGXXG--GSPXXP 653
TP PP L G GP G PG G G P P
Sbjct: 183 TPGPPGLPGLQGPVGPPGFTGPPGPPGPP 211
>AF018082-1|AAC39659.1| 1336|Homo sapiens type XVIII collagen
protein.
Length = 1336
Score = 30.7 bits (66), Expect = 7.7
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = -3
Query: 729 PPPXXXXGVXGLXGPPGXXG--GPPXTPXFXGDGG 631
P P GV G GPPG G GPP P G G
Sbjct: 516 PGPAGLPGVPGREGPPGFPGLPGPPGPPGREGPPG 550
>AF018081-1|AAC39658.1| 1516|Homo sapiens type XVIII collagen
protein.
Length = 1516
Score = 30.7 bits (66), Expect = 7.7
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = -3
Query: 729 PPPXXXXGVXGLXGPPGXXG--GPPXTPXFXGDGG 631
P P GV G GPPG G GPP P G G
Sbjct: 696 PGPAGLPGVPGREGPPGFPGLPGPPGPPGREGPPG 730
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,360,389
Number of Sequences: 237096
Number of extensions: 839159
Number of successful extensions: 14012
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 2885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12206
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11881370308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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