Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_C08
         (942 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1155 - 28065126-28065139,28065268-28065324,28065571-28066312     32   0.76 
06_03_1150 + 28022633-28023374,28023501-28023565                       32   0.76 
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249...    30   2.3  
02_05_0686 - 30900748-30902167,30903442-30904742                       30   3.1  
05_05_0219 + 23371561-23371680,23371799-23372207,23374520-233746...    29   4.1  
03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776     28   9.4  

>06_03_1155 - 28065126-28065139,28065268-28065324,28065571-28066312
          Length = 270

 Score = 31.9 bits (69), Expect = 0.76
 Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
 Frame = +1

Query: 358 FPVXGXXXXXFXGXXXXPXPGEX-GFXFWXPXPFPPPXXPGPGXSGXGXGFP 510
           FP+         G    P  G    F F  P PFP P  PG      G GFP
Sbjct: 78  FPLIPIGGSSGGGGAAPPSAGSGFRFPFPLPLPFPAPASPGGAPPSSGSGFP 129


>06_03_1150 + 28022633-28023374,28023501-28023565
          Length = 268

 Score = 31.9 bits (69), Expect = 0.76
 Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
 Frame = +1

Query: 358 FPVXGXXXXXFXGXXXXPXPGEX-GFXFWXPXPFPPPXXPGPGXSGXGXGFP 510
           FP+         G    P  G    F F  P PFP P  PG      G GFP
Sbjct: 78  FPLIPIGGSSGGGGAAPPSAGSGFRFPFPLPLPFPAPASPGGAPPSSGSGFP 129


>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
            27125387-27125656,27126027-27126377,27126480-27126757,
            27126887-27128330
          Length = 1398

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 19/62 (30%), Positives = 22/62 (35%)
 Frame = -1

Query: 915  PXXGGGRXXXXXXXXXXXXGXREGAXXXXQRGKKRGXXXPENXAGXGXREGPXGGFSXGE 736
            P  GG R            G R+G      R    G    +   G G R+GP GGF   E
Sbjct: 1003 PGGGGNRFESAVGIPGSYGGIRDGPGGFGGRDGPGGFGGRDGPGGFGGRDGP-GGFIGRE 1061

Query: 735  XP 730
             P
Sbjct: 1062 GP 1063


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 19/57 (33%), Positives = 19/57 (33%)
 Frame = +2

Query: 641 APPPXXXXXKNXPPXXQXGANPPXXF*XXXGXSPXENPPXGPSLXPXPAXFSGKXXP 811
           APPP        PP    G  PP          P   PP GPS  P P     K  P
Sbjct: 325 APPPPPPPKAAPPPPPPKGPPPP----PPAKGPPPPPPPKGPSPPPPPPPGGKKGGP 377


>05_05_0219 +
           23371561-23371680,23371799-23372207,23374520-23374635,
           23375385-23375855
          Length = 371

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
 Frame = -2

Query: 524 PPLXXGKPXPXPEXPGP-GXXGGGKGXGXQKXNP 426
           PP    K  P PE PGP G      G G +K NP
Sbjct: 111 PPTDAHKTSPPPEGPGPTGGKEQEGGAGGEKKNP 144


>03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776
          Length = 429

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 14/37 (37%), Positives = 15/37 (40%)
 Frame = +1

Query: 415 PGEXGFXFWXPXPFPPPXXPGPGXSGXGXGFPXXXGG 525
           PG  G  +    PFPPP  PG G    G   P    G
Sbjct: 227 PGHPGAFY----PFPPPSLPGVGPPRGGGAIPGLPAG 259


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,582,506
Number of Sequences: 37544
Number of extensions: 273299
Number of successful extensions: 1057
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 986
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2706104940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)