Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_C08
         (942 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2001|AAF48344.1|  334|Drosophila melanogaster CG11581-P...    29   7.0  

>AE014298-2001|AAF48344.1|  334|Drosophila melanogaster CG11581-PA
           protein.
          Length = 334

 Score = 29.5 bits (63), Expect = 7.0
 Identities = 27/96 (28%), Positives = 29/96 (30%), Gaps = 6/96 (6%)
 Frame = +1

Query: 445 PXPFPPPXXP---GPGXSGXGXGFPXXXGGXSVXPXXXGXPXKKXXXXRPTKGXXP*KGP 615
           P P  PP  P    P   G G G     GG  + P     P        PT G     GP
Sbjct: 75  PQPVQPPNFPLPIYPPFYGFGGGPVEQGGGHGIGPVPSAYPNGGAFPAGPTNGGAFAGGP 134

Query: 616 VXWGFS--XXGP-XPXEXXXKKXXPXXSXGGKPPTG 714
               F     GP  P      +       GG PP G
Sbjct: 135 TNAAFQLPPGGPFGPQAGNFAQPGGFPQAGGFPPQG 170


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,434,394
Number of Sequences: 53049
Number of extensions: 431040
Number of successful extensions: 2267
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2001
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4669258284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)