Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_C07
         (860 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    27   0.25 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   5.4  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   7.2  
AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    21   9.5  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   9.5  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   9.5  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 5/72 (6%)
 Frame = -1

Query: 542 IFLS*KLNFLFKSRHCDWRILFVKWI-----QHQFNVTLIDICEEIFYTVFISCIMNYYE 378
           +++S  LNF+    +  WR L+ +WI          V LI  C  +       C++N Y 
Sbjct: 144 LWISFFLNFMLHCNNTTWRCLY-RWIVLYTLSKMSQVMLIQFCAFVVVLKQKFCVVNQYI 202

Query: 377 PHLACCNKSRHE 342
             +   N   ++
Sbjct: 203 KQVCKLNNGHYK 214


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = -1

Query: 542 IFLS*KLNFLFKSRHCDWRILFVKWIQHQFNVTLIDICEEIFYTVFISCIMNYY 381
           IF +  L FL    +    +LF+  I + ++  +I     +FY V I  +  YY
Sbjct: 187 IFFNMHLLFLLCLDYFTLHLLFLPCIYYFYSAFIIFTIHLLFYCVLIILLCIYY 240


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -1

Query: 173 VRMSDYNKIICAGHDKFPI 117
           + M D++  +C G  K+P+
Sbjct: 429 IDMDDFSGTVCGGQVKYPL 447


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +3

Query: 339 WFVSAFVTASQMRFIIVHDTRNEDSIKNFFT 431
           +  +  V   Q RF+I++    + ++KNF T
Sbjct: 182 YLTTELVLMLQTRFVILNKQLTKITVKNFAT 212


>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 408 DSIKNFFTDVYE 443
           DSI+N F+DV E
Sbjct: 13  DSIRNIFSDVLE 24


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 408 DSIKNFFTDVYE 443
           DSI+N F+DV E
Sbjct: 73  DSIRNIFSDVLE 84


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 408 DSIKNFFTDVYE 443
           DSI+N F+DV E
Sbjct: 73  DSIRNIFSDVLE 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,098
Number of Sequences: 336
Number of extensions: 3918
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)