Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_C07
         (860 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071561-1|AAL49183.1|  139|Drosophila melanogaster RE62842p pro...   205   7e-53
AE014296-2645|AAF49531.2|  139|Drosophila melanogaster CG5161-PA...   205   7e-53
AE013599-1248|AAF58685.2|  138|Drosophila melanogaster CG9067-PA...    42   0.001

>AY071561-1|AAL49183.1|  139|Drosophila melanogaster RE62842p
           protein.
          Length = 139

 Score =  205 bits (500), Expect = 7e-53
 Identities = 89/135 (65%), Positives = 109/135 (80%)
 Frame = +3

Query: 141 TYYFVIVGHSDNPIFEMDFIPVTKETKKEDNRHLNQFIAHAALDLVDEHMWKVPNCYLKS 320
           TYYFVIVG +DNPI+E +F  V KE +KED+RHL QFIAHAALDLVDEH WK  N  LKS
Sbjct: 3   TYYFVIVGQNDNPIYEKEFSTVNKELRKEDHRHLTQFIAHAALDLVDEHKWKTANMQLKS 62

Query: 321 VDKFNQWFVSAFVTASQMRFIIVHDTRNEDSIKNFFTDVYECYIKLMLNPFYKEDTPITM 500
           +D+FNQWFVSAF+TASQ+RFIIVHD +N++ IKNFF ++Y+ YIK  +N FY+ +TPI  
Sbjct: 63  IDRFNQWFVSAFITASQIRFIIVHDNKNDEGIKNFFNEMYDTYIKNSMNAFYRINTPIKS 122

Query: 501 PAFEKKVQFLGKKYL 545
           P FEKK +  G+KYL
Sbjct: 123 PMFEKKSEIFGRKYL 137


>AE014296-2645|AAF49531.2|  139|Drosophila melanogaster CG5161-PA
           protein.
          Length = 139

 Score =  205 bits (500), Expect = 7e-53
 Identities = 89/135 (65%), Positives = 109/135 (80%)
 Frame = +3

Query: 141 TYYFVIVGHSDNPIFEMDFIPVTKETKKEDNRHLNQFIAHAALDLVDEHMWKVPNCYLKS 320
           TYYFVIVG +DNPI+E +F  V KE +KED+RHL QFIAHAALDLVDEH WK  N  LKS
Sbjct: 3   TYYFVIVGQNDNPIYEKEFSTVNKELRKEDHRHLTQFIAHAALDLVDEHKWKTANMQLKS 62

Query: 321 VDKFNQWFVSAFVTASQMRFIIVHDTRNEDSIKNFFTDVYECYIKLMLNPFYKEDTPITM 500
           +D+FNQWFVSAF+TASQ+RFIIVHD +N++ IKNFF ++Y+ YIK  +N FY+ +TPI  
Sbjct: 63  IDRFNQWFVSAFITASQIRFIIVHDNKNDEGIKNFFNEMYDTYIKNSMNAFYRINTPIKS 122

Query: 501 PAFEKKVQFLGKKYL 545
           P FEKK +  G+KYL
Sbjct: 123 PMFEKKSEIFGRKYL 137


>AE013599-1248|AAF58685.2|  138|Drosophila melanogaster CG9067-PA
           protein.
          Length = 138

 Score = 41.9 bits (94), Expect = 0.001
 Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
 Frame = +3

Query: 246 QFIAHAALDLVDEHMW------KVPNCYLKSVDKFNQWFVSAFVTASQMRFIIVHDTRN- 404
           Q+  +AALD+V+E         +    YL  +       +  FVT ++++FI+V D+ N 
Sbjct: 29  QYHVNAALDVVEEKCLIGKGAPESKELYLGLLYSTENHKIYGFVTNTRVKFIVVIDSSNV 88

Query: 405 ---EDSIKNFFTDVYECYIKLMLNPFYKEDTPITMPAFEKKVQFL 530
              E+ ++  F +++  Y   + NPFY     +T   F++ VQ L
Sbjct: 89  ALRENEVRAIFRNLHLLYTDAICNPFYIPGESLTSKKFDRAVQKL 133


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,778,641
Number of Sequences: 53049
Number of extensions: 596352
Number of successful extensions: 1172
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)