Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_C07
         (860 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    25   0.68 
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    24   1.6  

>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 25.4 bits (53), Expect = 0.68
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 260 MGYELVQMSVIFFLCFFSNR 201
           +GY L  +  +F LC F NR
Sbjct: 160 VGYLLYSLGQVFMLCIFGNR 179


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +3

Query: 348 SAFVTASQMRFIIVHDTRNEDSIKNFFTDVYECYIKLMLNPF 473
           +AF++   + FI VH +       N    V+   +  MLNPF
Sbjct: 126 AAFISYGTLFFIYVHPSATFSLDLNKVVSVFYTAVIPMLNPF 167


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,081
Number of Sequences: 438
Number of extensions: 4460
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)