Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_C07
         (860 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g80500.1 68414.m09433 expressed protein similar to Sedlin (Sw...    76   4e-14
At2g20930.1 68415.m02468 expressed protein                             43   2e-04
At2g41790.1 68415.m05165 peptidase M16 family protein / insulina...    31   0.99 
At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar ...    30   1.7  

>At1g80500.1 68414.m09433 expressed protein similar to Sedlin
           (Swiss-Prot:O14582) [Homo sapiens]; similar to MBP-1
           interacting protein-2A; MIP-2A (GI:9937493) [Homo
           sapiens]
          Length = 81

 Score = 75.8 bits (178), Expect = 4e-14
 Identities = 39/83 (46%), Positives = 51/83 (61%)
 Frame = +3

Query: 132 MAGTYYFVIVGHSDNPIFEMDFIPVTKETKKEDNRHLNQFIAHAALDLVDEHMWKVPNCY 311
           MA T  F+IVG +D PI+E +   V    K+ED   L+QFI HAALD+V +  W     +
Sbjct: 1   MANTACFIIVGRNDIPIYEAE---VGSAAKREDAAQLHQFILHAALDVVQDLAWTTSAMF 57

Query: 312 LKSVDKFNQWFVSAFVTASQMRF 380
           LKSVD+FN   VS +VTA  + F
Sbjct: 58  LKSVDRFNDLVVSVYVTAGHILF 80


>At2g20930.1 68415.m02468 expressed protein
          Length = 140

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 34/139 (24%), Positives = 66/139 (47%), Gaps = 10/139 (7%)
 Frame = +3

Query: 156 IVGHSDNPIFEMDFIPVTKETKKEDNRHLNQFIAHAALDLVDEHM-------WKVPNCYL 314
           +VGH +NP++   F      T  +D   L+  I H +LD+++E +         +   +L
Sbjct: 7   VVGHQNNPLYIQSF------TDADDALKLHH-IVHCSLDVIEERVNNPKKSGTTLNEAFL 59

Query: 315 KSVDKFNQWFVSAFVTASQMRFIIVH---DTRNEDSIKNFFTDVYECYIKLMLNPFYKED 485
             +     + V  ++T ++++FI+V    D R+ D +++FF   +  Y+  + NPF+   
Sbjct: 60  GLLYPTVNYKVYGYLTNTKVKFILVTTDLDVRDTD-VRSFFRKFHAAYVDAVSNPFHVPG 118

Query: 486 TPITMPAFEKKVQFLGKKY 542
             IT   F + V  +   Y
Sbjct: 119 KKITSRTFAQTVSNIVGSY 137


>At2g41790.1 68415.m05165 peptidase M16 family protein / insulinase
           family protein contains Pfam domain, PF05193: Peptidase
           M16 inactive domain; similar to insulin-degrading enzyme
           (Insulysin, Insulinase, Insulin protease) [Mouse]
           SWISS-PROT:Q9JHR7
          Length = 970

 Score = 31.1 bits (67), Expect = 0.99
 Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
 Frame = +3

Query: 255 AHAALDLVDEHMWKVPNCYLKSVDKFNQWFVSAFVTA-SQMRFIIVHDTRNEDSIKNFFT 431
           A+ A +  + H     +C+ +++D+F Q+F+   ++A + MR I   D+ N+   KN  +
Sbjct: 101 AYTASEETNYHFDVNADCFDEALDRFAQFFIKPLMSADATMREIKAVDSENQ---KNLLS 157

Query: 432 DVYECYIKLMLNPFYKEDTP 491
           D +   I+ +     KED P
Sbjct: 158 DGWR--IRQLQKHLSKEDHP 175


>At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar to
           beta-Amyrin Synthase GI:3688600 from [Panax ginseng] and
           GI:8918271 from [Pisum sativum]
          Length = 769

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -1

Query: 245 VQMSVIFFLCFFSNRNEIHFKDRIVRMSDY 156
           V+ ++    C+  + N IHFK  ++R+SDY
Sbjct: 372 VEKALCMLACWVEDPNGIHFKKHLLRISDY 401


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,239,320
Number of Sequences: 28952
Number of extensions: 298222
Number of successful extensions: 527
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2009406400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)