Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_C06
(937 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47181| Best HMM Match : Pkinase (HMM E-Value=7.7e-31) 41 0.001
SB_57637| Best HMM Match : SRP40_C (HMM E-Value=2.3e-08) 38 0.009
SB_53502| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.012
SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013) 38 0.012
SB_5548| Best HMM Match : PT (HMM E-Value=3.1) 38 0.012
SB_38133| Best HMM Match : TolA (HMM E-Value=0.38) 38 0.015
SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4) 37 0.027
SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7) 36 0.036
SB_24914| Best HMM Match : Nuc_sug_transp (HMM E-Value=3.6e-15) 36 0.047
SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.047
SB_51703| Best HMM Match : LRR_1 (HMM E-Value=1.9e-06) 36 0.047
SB_56336| Best HMM Match : Ag332 (HMM E-Value=5.1) 36 0.062
SB_44922| Best HMM Match : RNA_pol_Rpb1_1 (HMM E-Value=0) 36 0.062
SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.062
SB_31962| Best HMM Match : DUF1168 (HMM E-Value=1.5) 36 0.062
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.082
SB_29636| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.082
SB_26361| Best HMM Match : fn3 (HMM E-Value=0) 35 0.11
SB_10354| Best HMM Match : AT_hook (HMM E-Value=0.045) 35 0.11
SB_7120| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032) 34 0.14
SB_39187| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 34 0.14
SB_34673| Best HMM Match : UK (HMM E-Value=0.6) 34 0.14
SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061) 34 0.14
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 34 0.19
SB_3165| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_56912| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_52178| Best HMM Match : Drf_FH1 (HMM E-Value=2.2) 33 0.25
SB_12462| Best HMM Match : Kinesin (HMM E-Value=0) 33 0.25
SB_1091| Best HMM Match : Cupin_4 (HMM E-Value=0) 33 0.25
SB_35523| Best HMM Match : RVT_1 (HMM E-Value=0) 33 0.33
SB_30368| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_17147| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_36081| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.44
SB_15757| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.44
SB_13696| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.44
SB_11869| Best HMM Match : Excalibur (HMM E-Value=8) 33 0.44
SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.44
SB_35674| Best HMM Match : SH2 (HMM E-Value=0) 33 0.44
SB_29898| Best HMM Match : Chromadorea_ALT (HMM E-Value=0.0085) 33 0.44
SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.58
SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8) 32 0.58
SB_20305| Best HMM Match : PT (HMM E-Value=1.8) 32 0.58
SB_344| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.58
SB_32573| Best HMM Match : His_leader (HMM E-Value=0.0014) 32 0.77
SB_18984| Best HMM Match : DNA_topoisoIV (HMM E-Value=0) 32 0.77
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 32 0.77
SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.77
SB_32475| Best HMM Match : IWS1_C (HMM E-Value=0) 31 1.3
SB_29142| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_19851| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10) 31 1.3
SB_3098| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_50934| Best HMM Match : HSP90 (HMM E-Value=0) 31 1.3
SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_14943| Best HMM Match : CRAL_TRIO (HMM E-Value=8e-05) 31 1.3
SB_12646| Best HMM Match : SSrecog (HMM E-Value=0) 31 1.3
SB_9849| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_52574| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.8
SB_36169| Best HMM Match : DUF676 (HMM E-Value=0) 31 1.8
SB_28831| Best HMM Match : GCK (HMM E-Value=3.1) 31 1.8
SB_57515| Best HMM Match : CBFNT (HMM E-Value=3.3) 31 1.8
SB_47910| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14) 30 2.3
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_37674| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_702| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_36131| Best HMM Match : His_leader (HMM E-Value=2.7e-10) 30 3.1
SB_17045| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_5252| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13) 29 4.1
SB_56987| Best HMM Match : Cornifin (HMM E-Value=1.5) 29 4.1
SB_52882| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_52084| Best HMM Match : Vicilin_N (HMM E-Value=1.7) 29 4.1
SB_50497| Best HMM Match : CH (HMM E-Value=0.0084) 29 4.1
SB_47268| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_45235| Best HMM Match : CBM_20 (HMM E-Value=0.91) 29 4.1
SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092) 29 4.1
SB_39590| Best HMM Match : PHD (HMM E-Value=2.2e-18) 29 4.1
SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32) 29 4.1
SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84) 29 4.1
SB_42467| Best HMM Match : Borrelia_orfA (HMM E-Value=1.7) 29 4.1
SB_35171| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_12446| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_5549| Best HMM Match : PT (HMM E-Value=1.9) 29 4.1
SB_4831| Best HMM Match : E-MAP-115 (HMM E-Value=1.8) 29 4.1
SB_52819| Best HMM Match : E-MAP-115 (HMM E-Value=0.82) 29 5.4
SB_51002| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_47823| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 29 5.4
SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11) 29 5.4
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_37780| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_30912| Best HMM Match : SEA (HMM E-Value=1.1) 29 5.4
SB_24498| Best HMM Match : Galactosyl_T_2 (HMM E-Value=0) 29 5.4
SB_4288| Best HMM Match : DUF1165 (HMM E-Value=2.8) 29 5.4
SB_2244| Best HMM Match : zf-CCCH (HMM E-Value=0.004) 29 5.4
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54) 29 5.4
SB_26345| Best HMM Match : DUF1531 (HMM E-Value=2.4) 29 5.4
SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30) 29 5.4
SB_16871| Best HMM Match : DUF1168 (HMM E-Value=9.9) 29 5.4
SB_48649| Best HMM Match : DUF809 (HMM E-Value=1.3) 29 7.1
SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37) 29 7.1
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 29 7.1
SB_26383| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_23300| Best HMM Match : PT (HMM E-Value=1.2) 29 7.1
SB_22293| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_14494| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_7850| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 7.1
SB_58461| Best HMM Match : WH2 (HMM E-Value=0.63) 29 7.1
SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 7.1
SB_34529| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_26913| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_24336| Best HMM Match : PqiA (HMM E-Value=1.5) 29 7.1
SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89) 29 7.1
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 29 7.1
SB_59196| Best HMM Match : DUF593 (HMM E-Value=1.7) 28 9.4
SB_43190| Best HMM Match : GKAP (HMM E-Value=1.6e-09) 28 9.4
SB_24517| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_12442| Best HMM Match : zf-MYND (HMM E-Value=0.0028) 28 9.4
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_49029| Best HMM Match : Collagen (HMM E-Value=6.7) 28 9.4
SB_47687| Best HMM Match : SCP (HMM E-Value=1.8e-16) 28 9.4
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_24428| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
>SB_47181| Best HMM Match : Pkinase (HMM E-Value=7.7e-31)
Length = 801
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +3
Query: 177 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENG--D 350
EE E SPV+ A+ VE S K+N E E+ P GDA E D + G
Sbjct: 145 EEKDFFEETGSPVEHEVAENVEDDSSQTKKNNETELQEEEPPSVGDAMECKDKEKKGRKK 204
Query: 351 ATEKKETGVKRKSV 392
+++ GVK+++V
Sbjct: 205 LQPRQKIGVKKRNV 218
>SB_57637| Best HMM Match : SRP40_C (HMM E-Value=2.3e-08)
Length = 654
Score = 38.3 bits (85), Expect = 0.009
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Frame = +3
Query: 132 ATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDE---APEDSPA 302
A ++ D EE S + S KK+PAK+ +++ + ++ +DE P S
Sbjct: 26 AKQESSSEDDSSDDDEEEKSKKKAVSKEKKTPAKQESSSDDSSSDDSSDEDTKMPTKSKL 85
Query: 303 ENGDAEESNDASENGDATEKKETGVKRKSVA 395
+NG ++ + S + D++ + E KR A
Sbjct: 86 KNGTKTKAKEESSSSDSSSEDEPPAKRPKSA 116
>SB_53502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 37.9 bits (84), Expect = 0.012
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Frame = +3
Query: 129 LATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGT----DEAPEDS 296
+ MAD E P E T T E+ K+P+ E E G+E + DEA ++
Sbjct: 32 IQNMADEEGKATEATPPEATETPAAEAAPAKAPSADAEVQEEAGEETASATQADEATTEA 91
Query: 297 PAENGDAEESNDASENGDATEKKETG 374
+ G AE + E++ TG
Sbjct: 92 QPQEGAAENPATGAAEDAKGEEEPTG 117
>SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013)
Length = 440
Score = 37.9 bits (84), Expect = 0.012
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Frame = +3
Query: 177 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDE---APEDSPAENGDAEESNDASENG 347
EE S + S KK+PAK+ +++ + ++ +DE P S +NG ++ + S +
Sbjct: 284 EEEKSKKKAVSKEKKTPAKQESSSDDSSSDDSSDEDTKMPTKSKLKNGTKTKAKEESSSS 343
Query: 348 DATEKKETGVKRKSVA 395
D++ + E KR A
Sbjct: 344 DSSSEDEPPAKRPKSA 359
Score = 35.1 bits (77), Expect = 0.082
Identities = 19/87 (21%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +3
Query: 132 ATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENG 311
A D++ D +E +PK+ KK+P K+ ++E + + DE P+ G
Sbjct: 113 AATEDSSSDDDSSGEDE--DEKPKKKVEKKTPTKQESSSEEDDSSDDKDEKPKKKADNKG 170
Query: 312 -DAEESNDASENGDATEKKETGVKRKS 389
+ ++S D++++++ K+K+
Sbjct: 171 KKTQAKQESSSEDDSSDEEDEKPKKKA 197
Score = 32.3 bits (70), Expect = 0.58
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +3
Query: 177 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGD-- 350
EE + + VKK+PAK+ E++ + N +E P+ G + S +GD
Sbjct: 221 EEEKPKKKADDKVKKTPAKQ-ESSSEDDSSNEEEEKPKKKADVKGKKTPAKQESSSGDDS 279
Query: 351 ATEKKETGVKRKSVA 395
+ + +E K+K+V+
Sbjct: 280 SDDDEEEKSKKKAVS 294
Score = 29.5 bits (63), Expect = 4.1
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +3
Query: 156 DKKEVAPEEVTSTEPKESP--VK-KSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEES 326
D K+ A E+ +S + S VK K KK S+ ++ +DE E P ++ +
Sbjct: 57 DAKKAATEDSSSDDDSSSDEEVKVKKDTKKATKGSSSEDDSSSDE-EEVKPKKDAKKAAT 115
Query: 327 NDASENGDATEKKETGVKRKSV 392
D+S + D++ + E +K V
Sbjct: 116 EDSSSDDDSSGEDEDEKPKKKV 137
>SB_5548| Best HMM Match : PT (HMM E-Value=3.1)
Length = 157
Score = 37.9 bits (84), Expect = 0.012
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +3
Query: 174 PEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDA 353
PE+ T +P++ PV+K P K E E+ ++ PED P D +E + D
Sbjct: 70 PEDRTEYKPEDKPVEKKPEGKPENQPEKKPEDKPEDKPEDKPE---DKQEDKPEDKQEDK 126
Query: 354 TEKK 365
E K
Sbjct: 127 PEAK 130
Score = 31.5 bits (68), Expect = 1.0
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 162 KEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE 305
++ +P+ T PK SP K+ K+ N E+ T+ PED P E
Sbjct: 39 RKTSPKTSPKTSPKTSP--KTSQKQAGRQAGNKPEDRTEYKPEDKPVE 84
Score = 29.9 bits (64), Expect = 3.1
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = +3
Query: 156 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE-NGDAEESND 332
D+ E PE+ + E + P KK E + E+ ++ ED P + D E+
Sbjct: 72 DRTEYKPEDKPVEKKPEGKPENQPEKKPEDKPEDKPEDKPEDKQEDKPEDKQEDKPEAKP 131
Query: 333 ASENGDATEKK 365
+ D E+K
Sbjct: 132 EDKPEDEPEEK 142
>SB_38133| Best HMM Match : TolA (HMM E-Value=0.38)
Length = 2114
Score = 37.5 bits (83), Expect = 0.015
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = +3
Query: 159 KKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDAS 338
KKE E+ + +E+ ++ KK E E + K+N +E ED E EE+ +
Sbjct: 1880 KKENEEEDDKKEKKEENEEEEKKKKKKENEEEDDKKNNKEENEEDEKKEKKKKEENEEED 1939
Query: 339 ENGDATEKKE 368
+ T+KK+
Sbjct: 1940 DKKKKTKKKK 1949
>SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4)
Length = 323
Score = 36.7 bits (81), Expect = 0.027
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +3
Query: 156 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKE--NGTDEAPEDSPAENGDAEESN 329
DK + + S E E + E+ ESNG + NG+DE+ E E+ +++ESN
Sbjct: 138 DKSNESDKRNESDESDEDDESNGSDESNESDESNGSDESNGSDESNESD--ESNESDESN 195
Query: 330 DASENGDATEKKETGVKRKS 389
++ E+ ++ E + +S
Sbjct: 196 ESDESNESDESNGSDESNES 215
Score = 36.3 bits (80), Expect = 0.036
Identities = 18/78 (23%), Positives = 36/78 (46%)
Frame = +3
Query: 156 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDA 335
DK + + S + ES + + E ESNG + + + E+ ++ESN++
Sbjct: 126 DKSNESDKSNESDKSNESDKRNESDESDEDDESNGSDESNESDESNGSDESNGSDESNES 185
Query: 336 SENGDATEKKETGVKRKS 389
E+ ++ E E+ +S
Sbjct: 186 DESNESDESNESDESNES 203
Score = 35.5 bits (78), Expect = 0.062
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +3
Query: 156 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKE--NGTDEAPEDSPAENGDAEESN 329
D+ + E S E ES + E+ ESN + NG+DE+ E E+ +++ESN
Sbjct: 168 DESNGSDESNGSDESNESDESNESDESNESDESNESDESNGSDESNESD--ESNESDESN 225
Query: 330 DASENGDATEKKET 371
+ E+ ++ E E+
Sbjct: 226 GSDESNESDESNES 239
Score = 34.7 bits (76), Expect = 0.11
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = +3
Query: 156 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDA 335
D+ + E S E ES + E+ ESNG + + + E+ ++ESN++
Sbjct: 174 DESNGSDESNESDESNESDESNESDESNESDESNGSDESNESDESNESDESNGSDESNES 233
Query: 336 SENGDATE 359
E+ ++ E
Sbjct: 234 DESNESDE 241
Score = 34.7 bits (76), Expect = 0.11
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +3
Query: 156 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKE--NGTDEAPEDSPAENGDAEESN 329
D+ + E S E ES + E+ ESN + NG+DE+ E E+ +++ESN
Sbjct: 186 DESNESDESNESDESNESDESNGSDESNESDESNESDESNGSDESNESD--ESNESDESN 243
Query: 330 DASENGDATEKKET 371
+ E+ ++ E E+
Sbjct: 244 GSDESYESDESDES 257
Score = 33.1 bits (72), Expect = 0.33
Identities = 21/77 (27%), Positives = 42/77 (54%)
Frame = +3
Query: 159 KKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDAS 338
K+E EEV + E S K + E+ ES+ + N +D++ E E+ +++ESN++
Sbjct: 64 KEEDGEEEVVTDERGISSSKDESDESDESNESD-ESNESDKSNESD--ESNESDESNESD 120
Query: 339 ENGDATEKKETGVKRKS 389
E+ ++ + E+ +S
Sbjct: 121 ESNESDKSNESDKSNES 137
Score = 31.9 bits (69), Expect = 0.77
Identities = 15/77 (19%), Positives = 41/77 (53%)
Frame = +3
Query: 159 KKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDAS 338
++EV +E + K+ + + + + + + K N +DE+ E E+ +++ESN++
Sbjct: 69 EEEVVTDERGISSSKDESDESDESNESDESNESDKSNESDESNESD--ESNESDESNESD 126
Query: 339 ENGDATEKKETGVKRKS 389
++ ++ + E+ +S
Sbjct: 127 KSNESDKSNESDKSNES 143
Score = 31.9 bits (69), Expect = 0.77
Identities = 17/78 (21%), Positives = 34/78 (43%)
Frame = +3
Query: 156 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDA 335
D+ + E S E S + E+ ESN + + + E+ +++ESN++
Sbjct: 162 DESNESDESNGSDESNGSDESNESDESNESDESNESDESNESDESNGSDESNESDESNES 221
Query: 336 SENGDATEKKETGVKRKS 389
E+ + E E+ +S
Sbjct: 222 DESNGSDESNESDESNES 239
Score = 30.3 bits (65), Expect = 2.3
Identities = 14/71 (19%), Positives = 33/71 (46%)
Frame = +3
Query: 156 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDA 335
D+ + + E S E ES + E+ ESN + + + ++ ++++SN++
Sbjct: 84 DESDESDESNESDESNESDKSNESDESNESDESNESDESNESDKSNESDKSNESDKSNES 143
Query: 336 SENGDATEKKE 368
+ ++ E E
Sbjct: 144 DKRNESDESDE 154
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/65 (20%), Positives = 32/65 (49%)
Frame = +3
Query: 177 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDAT 356
E S E ES K E+ ESN + + + ++ ++++SN++ ++ ++
Sbjct: 85 ESDESDESNESDESNESDKSNESDESNESDESNESDESNESDKSNESDKSNESDKSNESD 144
Query: 357 EKKET 371
++ E+
Sbjct: 145 KRNES 149
Score = 29.1 bits (62), Expect = 5.4
Identities = 16/78 (20%), Positives = 33/78 (42%)
Frame = +3
Query: 156 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDA 335
D+ + E S E S + E+ ESN + + + E+ ++ESN++
Sbjct: 156 DESNGSDESNESDESNGSDESNGSDESNESDESNESDESNESDESNESDESNGSDESNES 215
Query: 336 SENGDATEKKETGVKRKS 389
E+ ++ E + +S
Sbjct: 216 DESNESDESNGSDESNES 233
>SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7)
Length = 241
Score = 36.3 bits (80), Expect = 0.036
Identities = 18/76 (23%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +3
Query: 144 DAAVDKKEVAPEEVTSTEPKESPVKK-SPAKKVEAAESNGKENGTDEAPEDSPAENGDAE 320
+A + +PE + + KE K+ +PA +A ++ E + D+P E+ ++E
Sbjct: 37 EAVAPEAPASPESENTDDFKEPEAKEETPAAAPKAEDTPALETSGESKLPDTPVEDEESE 96
Query: 321 ESNDASENGDATEKKE 368
+ +D+ ++GD E ++
Sbjct: 97 DDDDSFDDGDDEEDED 112
Score = 34.3 bits (75), Expect = 0.14
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +3
Query: 147 AAVDKKEVAPEEVTSTEPK--ESPVKKSPAKKVEAAESNGK-ENGTDEAPEDSPAENGDA 317
AA K E P TS E K ++PV+ ++ + + +G E D+ ++ +++GD
Sbjct: 66 AAAPKAEDTPALETSGESKLPDTPVEDEESEDDDDSFDDGDDEEDEDDEDDEEDSDDGDD 125
Query: 318 EESNDASENGDATEKKE 368
E+ S +GDA K+
Sbjct: 126 EDDEKESGDGDAGNAKD 142
Score = 31.5 bits (68), Expect = 1.0
Identities = 13/56 (23%), Positives = 29/56 (51%)
Frame = +3
Query: 177 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASEN 344
++ + K+ KK KKV+ + + K+N + + E +++GD E+ + E+
Sbjct: 162 DDKKKVDEKKEDEKKDDDKKVDEKKEDDKKNDSSASGESEDSDDGDDEDDEEDEED 217
>SB_24914| Best HMM Match : Nuc_sug_transp (HMM E-Value=3.6e-15)
Length = 979
Score = 35.9 bits (79), Expect = 0.047
Identities = 22/78 (28%), Positives = 36/78 (46%)
Frame = +3
Query: 141 ADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAE 320
++A V + V E + V+ A + A G+ EA E + G+A
Sbjct: 643 SEAGVAGEAVEGSEASKAGEAGEAVEAGEASEAGEAIEAGEAGEASEASEAAGEATGEAG 702
Query: 321 ESNDASENGDATEKKETG 374
E+++ASE G+A+E E G
Sbjct: 703 EASEASEAGEASEAGEAG 720
Score = 35.5 bits (78), Expect = 0.062
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 240 EAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETG 374
EA+E+ G ++ +E G+A E+ +ASE G+A++ E G
Sbjct: 418 EASEAGGASEASEAGEAGGASEAGEASEAGEASEAGEASKASEAG 462
Score = 34.7 bits (76), Expect = 0.11
Identities = 24/75 (32%), Positives = 39/75 (52%)
Frame = +3
Query: 171 APEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGD 350
A E ++E E+ + EA E++ + G EA E S A G+A E+ +ASE G+
Sbjct: 884 AGEASKASEAGEAGEASEAGEASEAGEAS-EAGGASEAGEASEA--GEASEAGEASEAGE 940
Query: 351 ATEKKETGVKRKSVA 395
A+E E +++A
Sbjct: 941 ASEAVEASEASEAIA 955
Score = 34.3 bits (75), Expect = 0.14
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +3
Query: 171 APEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPA-ENGDAEESNDASENG 347
A E ++E E+ +K EA E++ + G EA E S A E +A E++ ASE G
Sbjct: 437 ASEAGEASEAGEASEAGEASKASEAGEAS-EAGGASEAGEASEAGEASEAGEASKASEAG 495
Query: 348 DATEKKETGVKRKSVA 395
+A+E E +++A
Sbjct: 496 EASEAVEASEASEAIA 511
Score = 33.9 bits (74), Expect = 0.19
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +3
Query: 171 APEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPA-ENGDAEESNDASENG 347
A E ++E E+ V + EA+E+ G++ EA E A E +A E+++ASE G
Sbjct: 779 ASEVGEASEAGENGVASEAGEDGEASEA-GEDGEASEASEAGEASEASEAGEASEASEAG 837
Query: 348 DATEKKETG 374
+A E E G
Sbjct: 838 EAGEAGEAG 846
Score = 33.5 bits (73), Expect = 0.25
Identities = 21/78 (26%), Positives = 37/78 (47%)
Frame = +3
Query: 141 ADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAE 320
++AA + A E ++E E+ + EA+E+ + + E G+A
Sbjct: 691 SEAAGEATGEAGEASEASEAGEASEAGEAGEAGEASEAGVAGEAVEGSEASKAGEAGEAV 750
Query: 321 ESNDASENGDATEKKETG 374
E+ +ASE G+A+E E G
Sbjct: 751 EAGEASEAGEASEAGEAG 768
Score = 33.1 bits (72), Expect = 0.33
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +3
Query: 171 APEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPA-ENGDAEESNDASENG 347
A E + E E + EA E+ G+ + EA E A + G+A E+ +ASE G
Sbjct: 725 ASEAGVAGEAVEGSEASKAGEAGEAVEA-GEASEAGEASEAGEAGKAGEASEAGEASEVG 783
Query: 348 DATEKKETGV 377
+A+E E GV
Sbjct: 784 EASEAGENGV 793
Score = 32.7 bits (71), Expect = 0.44
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +3
Query: 171 APEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGD 350
A E+ ++E E ++ EA+E++ ++ + E G+A E+ +A E G+
Sbjct: 797 AGEDGEASEAGEDGEASEASEAGEASEASEAGEASEASEAGEAGEAGEAGEAGEAGEAGE 856
Query: 351 ATEKKETG 374
A+E E G
Sbjct: 857 ASEAGEAG 864
Score = 32.7 bits (71), Expect = 0.44
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 171 APEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPA-ENGDAEESNDASENG 347
A E ++E E+ +K EA E+ G+ + EA E A E G A E+ +ASE G
Sbjct: 869 ASEAGEASEAGEASKAGEASKASEAGEA-GEASEAGEASEAGEASEAGGASEAGEASEAG 927
Query: 348 DATEKKE 368
+A+E E
Sbjct: 928 EASEAGE 934
Score = 32.3 bits (70), Expect = 0.58
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +3
Query: 171 APEEVTSTEPKESPVKKSPAKKVEAAE-SNGKENGTDEAPEDSPA-ENGDAEESNDASEN 344
A E V + E E+ + EA+E S T EA E S A E G+A E+ +A E
Sbjct: 663 AGEAVEAGEASEAGEAIEAGEAGEASEASEAAGEATGEAGEASEASEAGEASEAGEAGEA 722
Query: 345 GDATEKKETG 374
G+A+E G
Sbjct: 723 GEASEAGVAG 732
Score = 31.9 bits (69), Expect = 0.77
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = +3
Query: 168 VAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENG 347
VA E E E+ ++ EA E++ + + E G+A E+ +A E G
Sbjct: 793 VASEAGEDGEASEAGEDGEASEASEAGEASEASEAGEASEASEAGEAGEAGEAGEAGEAG 852
Query: 348 DATEKKETG 374
+A E E G
Sbjct: 853 EAGEASEAG 861
Score = 31.1 bits (67), Expect = 1.3
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +3
Query: 171 APEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPA-ENGDAEESNDASENG 347
A E ++E E+ ++ EA+E+ G+ + EA + S A E G+A E+ +ASE G
Sbjct: 851 AGEAGEASEAGEAGGASEASEAGEASEA-GEASKAGEASKASEAGEAGEASEAGEASEAG 909
Query: 348 DATE 359
+A+E
Sbjct: 910 EASE 913
Score = 30.7 bits (66), Expect = 1.8
Identities = 23/81 (28%), Positives = 34/81 (41%)
Frame = +3
Query: 132 ATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENG 311
A+ A A + E A E + E E+ + EA E+ G ++ E
Sbjct: 824 ASEAGEASEASE-AGEAGEAGEAGEAGEAGEAGEASEAGEAGGASEASEAGEASEAGEAS 882
Query: 312 DAEESNDASENGDATEKKETG 374
A E++ ASE G+A E E G
Sbjct: 883 KAGEASKASEAGEAGEASEAG 903
Score = 30.7 bits (66), Expect = 1.8
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 240 EAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVK 380
EA+E+ G + + +E G+A E+ +ASE +A+E E K
Sbjct: 910 EASEAGGASEAGEASEAGEASEAGEASEAGEASEAVEASEASEAIAK 956
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +3
Query: 240 EAAESNGKENGTDEAPEDSPA-ENGDAEESNDASENGDATE 359
EA+E+ G+ G EA E S A E +A E++ ASE G+A+E
Sbjct: 427 EASEA-GEAGGASEAGEASEAGEASEAGEASKASEAGEASE 466
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +3
Query: 189 STEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKE 368
++E E+ + EA+E+ + + E G+A E+ +ASE G+A E E
Sbjct: 624 ASEAGEAGETSEAGEAGEASEAGVAGEAVEGSEASKAGEAGEAVEAGEASEAGEAIEAGE 683
Query: 369 TG 374
G
Sbjct: 684 AG 685
Score = 29.5 bits (63), Expect = 4.1
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Frame = +3
Query: 213 VKKSPAKKVEAAESN--GKENGTDEAPEDSPAEN----GDAEESNDASENGDATEKKETG 374
VK K+EA E++ G+ T EA E A G+A E ++AS+ G+A E E G
Sbjct: 611 VKLVELVKLEAGEASEAGEAGETSEAGEAGEASEAGVAGEAVEGSEASKAGEAGEAVEAG 670
Score = 29.1 bits (62), Expect = 5.4
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +3
Query: 168 VAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDAS--- 338
VA E V +E ++ + EA+E+ + +E G+A E +AS
Sbjct: 730 VAGEAVEGSEASKAGEAGEAVEAGEASEAGEASEAGEAGKAGEASEAGEASEVGEASEAG 789
Query: 339 ENGDATEKKETG 374
ENG A+E E G
Sbjct: 790 ENGVASEAGEDG 801
Score = 29.1 bits (62), Expect = 5.4
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 171 APEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPA-ENGDAEESNDASENG 347
A E ++E E+ ++ EA E+ G+ EA E A E G+A +++ASE G
Sbjct: 815 ASEAGEASEASEAGEASEASEAGEAGEA-GEAGEAGEAGEAGEASEAGEAGGASEASEAG 873
Query: 348 DATEKKE 368
+A+E E
Sbjct: 874 EASEAGE 880
Score = 28.7 bits (61), Expect = 7.1
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +3
Query: 228 AKKVEAAESNGKENGTDEAPEDSPA-ENGDAEESNDASENGDATEKKE 368
A K A + G EA E A E +A E+ ASE G+A+E E
Sbjct: 401 ASKASEASEASEAGGASEASEAGGASEASEAGEAGGASEAGEASEAGE 448
>SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1434
Score = 35.9 bits (79), Expect = 0.047
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = +3
Query: 174 PEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDA 353
P + T+ E K VK S A K ++ ES E+G +S E+G++ ES ++ E+G++
Sbjct: 874 PAKETANE-KAGMVKNSKASKEDSNESG--ESGESGKSGES-GESGESGESGESGESGES 929
Query: 354 TEKKETGVKRKSVA 395
E E+G S A
Sbjct: 930 GESGESGESGDSAA 943
Score = 32.3 bits (70), Expect = 0.58
Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +3
Query: 153 VDKKEVAPEEVTSTEPKESPVKKSP-AKKVEAAESNGKENGTDEAPEDSPAENGDAEESN 329
+DK + + + KE+ +K+ K +A++ + E+G + E+G++ ES
Sbjct: 860 LDKTDSGKVAMFAQPAKETANEKAGMVKNSKASKEDSNESG-ESGESGKSGESGESGESG 918
Query: 330 DASENGDATEKKETGVKRKS 389
++ E+G++ E E+G +S
Sbjct: 919 ESGESGESGESGESGESGES 938
Score = 31.9 bits (69), Expect = 0.77
Identities = 16/73 (21%), Positives = 33/73 (45%)
Frame = +3
Query: 177 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDAT 356
E S E ES + E+ ES + E+G++ +S ++ +N D++
Sbjct: 678 ESGESGESGESGESGESGESGESGESGESGESGESGESGESGESGESGDSGESQDNADSS 737
Query: 357 EKKETGVKRKSVA 395
+K G+ ++ V+
Sbjct: 738 IQKRNGIPQEKVS 750
Score = 30.7 bits (66), Expect = 1.8
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +3
Query: 204 ESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKR 383
ES K E+ ES + E+G++ ES ++ E+G++ E E+G
Sbjct: 663 ESGESGESGKSGESGESGESGESGESGESGESGESGESGESGESGESGESGESGESGESG 722
Query: 384 KS 389
+S
Sbjct: 723 ES 724
Score = 30.3 bits (65), Expect = 2.3
Identities = 15/67 (22%), Positives = 30/67 (44%)
Frame = +3
Query: 189 STEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKE 368
S E E + K ++ +G + E+G++ ES ++ E+G++ E E
Sbjct: 637 SDESGERSASRESGKLKAESDIDGSGESGESGESGKSGESGESGESGESGESGESGESGE 696
Query: 369 TGVKRKS 389
+G +S
Sbjct: 697 SGESGES 703
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +3
Query: 189 STEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKE 368
S E ES + E+ ES + E+G++ ES ++ E+G++ E E
Sbjct: 661 SGESGESGESGKSGESGESGESGESGESGESGESGESGESGESGESGESGESGESGESGE 720
Query: 369 TG 374
+G
Sbjct: 721 SG 722
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +3
Query: 189 STEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKE 368
S E ES + E+ ES + E+G++ ES ++ E+G++ E E
Sbjct: 664 SGESGESGKSGESGESGESGESGESGESGESGESGESGESGESGESGESGESGESGESGE 723
Query: 369 TG 374
+G
Sbjct: 724 SG 725
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +3
Query: 240 EAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETG 374
E + S+GKE+ D + S +E+GD+++S ++ E+G+ + G
Sbjct: 569 EGSASSGKEDDMDGS--GSASESGDSDDSGNSGESGEGEPDEGDG 611
Score = 29.9 bits (64), Expect = 3.1
Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +3
Query: 141 ADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAES--NGKENGTDEAPEDSPA-ENG 311
A++ +D + E S + ES + E+ ES +G+ + E+ E + E+G
Sbjct: 654 AESDIDGSGESGESGESGKSGESGESGESGESGESGESGESGESGESGESGESGESGESG 713
Query: 312 DAEESNDASENGDATEKKE 368
++ ES ++ E+GD+ E ++
Sbjct: 714 ESGESGESGESGDSGESQD 732
Score = 29.1 bits (62), Expect = 5.4
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +3
Query: 225 PAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKS 389
P +KV G++ + D P E+G++ ES ++ E+ + E E+G +S
Sbjct: 745 PQEKVSKKAEIGQKKQLSQK-SDEPGESGESGESGESGESDETGELGESGKSGES 798
>SB_51703| Best HMM Match : LRR_1 (HMM E-Value=1.9e-06)
Length = 632
Score = 35.9 bits (79), Expect = 0.047
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +3
Query: 219 KSPAKKVEAAESNGKENGTDEAPEDS--PAENGDAEESNDASENGDATEKKETGVKRKSV 392
K K+ ++A++ GK++G E D E DA + N+ ++ D +KK+TG +
Sbjct: 489 KKEEKRKDSAKAKGKDDGEFEISADCICQGEKEDAGQDNEEAKKADGADKKKTGKEHSEK 548
Query: 393 A 395
A
Sbjct: 549 A 549
>SB_56336| Best HMM Match : Ag332 (HMM E-Value=5.1)
Length = 366
Score = 35.5 bits (78), Expect = 0.062
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 156 DKKEVAPEEVTSTEP-KESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESND 332
D+KE EE+ EP KE PV++ ++ E +E DE P+ +G+ ++
Sbjct: 245 DEKEREQEELVEEEPKKEEPVEEETKQEEPVEEEPKQEEAVDEEPKKEEQVDGEPKQEEQ 304
Query: 333 ASE 341
E
Sbjct: 305 VEE 307
Score = 32.7 bits (71), Expect = 0.44
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +3
Query: 159 KKEVAPEEVTSTEP-KESPVKKSPAKKVEAAESNGKENGTDEAP-EDSPAENGDAEESND 332
++E EE EP +E P ++ P K+ E +E E P E P + EE
Sbjct: 37 QEEQVEEEPKQEEPVEEEPKQEEPVKEEPKQEEPVEEEPKQEEPVEQKPKQEEPVEEEPK 96
Query: 333 ASENGDATEKKETGVKRK 386
E + +K+E VK +
Sbjct: 97 QEEPVEEEQKQEEPVKEE 114
>SB_44922| Best HMM Match : RNA_pol_Rpb1_1 (HMM E-Value=0)
Length = 1596
Score = 35.5 bits (78), Expect = 0.062
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 240 EAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETG 374
EA+E+ ++ E G A E+ +ASE G+A+E ETG
Sbjct: 19 EASETGEASEASEAGEASETGEAGKASEAGEASETGEASEASETG 63
Score = 34.3 bits (75), Expect = 0.14
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +3
Query: 171 APEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEN-GDAEESNDASENG 347
A E ++E E+ A + A GK + EA E A G A E+ +ASE G
Sbjct: 215 ASEASEASETGEASEATGEASEAGEASKAGKASEAGEAVEAGEASKAGRASEAGEASEAG 274
Query: 348 DATEKKETG 374
+A+E E G
Sbjct: 275 EASEAGEAG 283
Score = 33.9 bits (74), Expect = 0.19
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +3
Query: 132 ATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESN--GKENGTDEAPEDSPA- 302
A+ A + E E + E ++ + VEA E++ G+ + EA E A
Sbjct: 218 ASEASETGEASEATGEASEAGEASKAGKASEAGEAVEAGEASKAGRASEAGEASEAGEAS 277
Query: 303 ENGDAEESNDASENGDAT 356
E G+A E+ +ASE+G+AT
Sbjct: 278 EAGEAGEAGEASEDGEAT 295
Score = 33.1 bits (72), Expect = 0.33
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Frame = +3
Query: 150 AVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESN--GKENGTDEAPE-----DSPAEN 308
AVD VA E + E E+ ++ EA +++ G+ + T EA E ++ E
Sbjct: 11 AVDSG-VASEASETGEASEASEAGEASETGEAGKASEAGEASETGEASEASETGEATGEA 69
Query: 309 GDAEESNDASENGDATEKKETGVKRKS 389
G+A E+ +ASE +A E ETG K+
Sbjct: 70 GEASETGEASEASEAGEASETGEAGKA 96
Score = 32.3 bits (70), Expect = 0.58
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +3
Query: 195 EPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPA----ENGDAEESNDASENGDATEK 362
E E+ ++ EA G+ + T EA E S A E G+A ++++ASE G+A+E
Sbjct: 49 EASETGEASEASETGEATGEAGEASETGEASEASEAGEASETGEAGKASEASETGEASEA 108
Query: 363 KE 368
E
Sbjct: 109 GE 110
Score = 31.5 bits (68), Expect = 1.0
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Frame = +3
Query: 132 ATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEN- 308
A+ A A++ E E + E ++ K S A + GK + EA E A
Sbjct: 105 ASEAGEAIEADEATGEAGEANEASKAG-KASEAGEASEVGGAGKASEAGEASETGEASEA 163
Query: 309 -GDAEESNDASENGDATEKKETGVKRKSV 392
G+A E+ +ASE A + E G ++V
Sbjct: 164 TGEASEAGEASEASKAGKASEAGEAGEAV 192
Score = 30.7 bits (66), Expect = 1.8
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +3
Query: 240 EAAESNGKENGTDEAPEDSPA-ENGDAEESNDASENGD---ATEKKETG 374
EA+E++ T EA E S E +A E+ +ASE G+ A+E ETG
Sbjct: 55 EASEASETGEATGEAGEASETGEASEASEAGEASETGEAGKASEASETG 103
Score = 30.7 bits (66), Expect = 1.8
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +3
Query: 141 ADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAE 320
++A + E S K S ++ + VEA E++ K EA E S A G A
Sbjct: 161 SEATGEASEAGEASEASKAGKASEAGEA-GEAVEAGEAS-KAGRASEAGEASEA--GKAS 216
Query: 321 ESNDASENGDATE 359
E+++ASE G+A+E
Sbjct: 217 EASEASETGEASE 229
Score = 29.9 bits (64), Expect = 3.1
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +3
Query: 177 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDAT 356
E ++E E+ K EA+E+ G+ + EA E A G+A E+N+AS+ G A+
Sbjct: 77 EASEASEAGEASETGEAGKASEASET-GEASEAGEAIEADEA-TGEAGEANEASKAGKAS 134
Query: 357 EKKE 368
E E
Sbjct: 135 EAGE 138
Score = 29.9 bits (64), Expect = 3.1
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Frame = +3
Query: 132 ATMADAAVDKKEVAPEEVTST--EPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE 305
A+ A AV+ E + S E E+ + EA E++ T EA E S A
Sbjct: 246 ASEAGEAVEAGEASKAGRASEAGEASEAGEASEAGEAGEAGEASEDGEATGEAGEASIA- 304
Query: 306 NGDAEESNDASENGDATEKKETGVKRKS 389
G+A E++ A+E +A E E G K+
Sbjct: 305 -GEAGEASKAAEASEAGEASEAGEASKA 331
Score = 29.5 bits (63), Expect = 4.1
Identities = 20/79 (25%), Positives = 34/79 (43%)
Frame = +3
Query: 132 ATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENG 311
A+ A A + E + ++E E+ K EA E+ + + +E G
Sbjct: 148 ASEAGEASETGEASEATGEASEAGEASEASKAGKASEAGEAGEAVEAGEASKAGRASEAG 207
Query: 312 DAEESNDASENGDATEKKE 368
+A E+ ASE +A+E E
Sbjct: 208 EASEAGKASEASEASETGE 226
Score = 29.1 bits (62), Expect = 5.4
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 240 EAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKS 389
EA+E+ T EA E E +A ++ ASE G+A E E G K+
Sbjct: 153 EASETGEASEATGEASE--AGEASEASKAGKASEAGEAGEAVEAGEASKA 200
Score = 29.1 bits (62), Expect = 5.4
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +3
Query: 159 KKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPA----ENGDAEES 326
K A E + E E+ + S A + A + EA E S A E G+A E+
Sbjct: 214 KASEASEASETGEASEATGEASEAGEASKAGKASEAGEAVEAGEASKAGRASEAGEASEA 273
Query: 327 NDASENGDATEKKE 368
+ASE G+A E E
Sbjct: 274 GEASEAGEAGEAGE 287
Score = 29.1 bits (62), Expect = 5.4
Identities = 26/90 (28%), Positives = 43/90 (47%)
Frame = +3
Query: 132 ATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENG 311
A+ A A + E A E ++E E+ ++ EA G+ + EA E S A
Sbjct: 258 ASKAGRASEAGE-ASEAGEASEAGEAGEAGEASEDGEATGEAGEASIAGEAGEASKA--A 314
Query: 312 DAEESNDASENGDATEKKETGVKRKSVALD 401
+A E+ +ASE G+A++ V ++ LD
Sbjct: 315 EASEAGEASEAGEASKAGNMAVGNENETLD 344
>SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 35.5 bits (78), Expect = 0.062
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = +3
Query: 141 ADAAVDKKEVAPEE-VTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDA 317
+D ++ E+A EE VTS E E V PA+KVEA+ +E G + AE +
Sbjct: 823 SDVPTEEAEMATEEAVTSVEEAEDKV---PAEKVEASIEEAEEPGEEVESLLKEAEAPEE 879
Query: 318 EESNDASENGDATEKKETGVKRKSVALD 401
E + E EK V+ V ++
Sbjct: 880 EVGDQVEEVEAPVEKAAASVEEAKVPME 907
Score = 31.1 bits (67), Expect = 1.3
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +3
Query: 141 ADAAVDKKEVAPEEV-TSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDA 317
A A+V++ EV EE T E E PV+ + A V+ AE+ +E EAP + + A
Sbjct: 1170 AVASVEEAEVPIEEAETQAEDTEGPVEDAEA-SVQKAEAPVEET---EAPFEE--DEAPA 1223
Query: 318 EESNDASENGDATEKKETGVK 380
E++ E G + ++ E VK
Sbjct: 1224 EKTEKPVEAGPSVQEAEAPVK 1244
Score = 29.5 bits (63), Expect = 4.1
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +3
Query: 177 EEVTSTEPK--ESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGD 350
E+VT E E + +S +V+ E NG+ DE PED P D E + + +
Sbjct: 269 EKVTIEEDDVPEFEMPESDGIRVDETE-NGEHEAVDELPEDKPDTEADNYEQREETPTKE 327
Query: 351 ATEKKE 368
K E
Sbjct: 328 DELKSE 333
Score = 29.1 bits (62), Expect = 5.4
Identities = 31/85 (36%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Frame = +3
Query: 132 ATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGK------ENGTDEAPED 293
A +A VDK E A EE T TE SP +KVE AE+ + + T+EA E
Sbjct: 555 AEAIEAKVDKVE-AEEEETQTE--------SPTEKVEEAEATAEVPIEDADTSTEEA-ES 604
Query: 294 SPAENGDAEESNDASENGDATEKKE 368
AE A + +A DA E+ E
Sbjct: 605 PAAEPEVAVKEAEAPVEDDAFEEPE 629
>SB_31962| Best HMM Match : DUF1168 (HMM E-Value=1.5)
Length = 205
Score = 35.5 bits (78), Expect = 0.062
Identities = 18/72 (25%), Positives = 37/72 (51%)
Frame = +3
Query: 156 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDA 335
+++E EE TE +E ++ ++ E E +E+G +E D + +ESN++
Sbjct: 87 EEEEQTEEEEEQTEEEEEQTEEE--EEEEEKEEGKEEDGEEEVVTDERGISSSKDESNES 144
Query: 336 SENGDATEKKET 371
E+ ++ E E+
Sbjct: 145 DESNESDESNES 156
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 35.1 bits (77), Expect = 0.082
Identities = 26/73 (35%), Positives = 34/73 (46%)
Frame = +3
Query: 177 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDAT 356
E + + K+ VKK KK E AE +E E P+D DAE+ D + D T
Sbjct: 482 ETRSGSAAKKEDVKKDETKKSEKAEIKKEEIKVKEEPKD------DAEKKEDEGKEPDKT 535
Query: 357 EKKETGVKRKSVA 395
E + T K KS A
Sbjct: 536 E-QTTSAKSKSPA 547
Score = 32.3 bits (70), Expect = 0.58
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +3
Query: 156 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAP----EDSPAENGDAEE 323
+KKE +E TE S KSPA K + S N +D++P ++ + + +
Sbjct: 523 EKKEDEGKEPDKTEQTTSAKSKSPASKDGKSRSQKGSNSSDDSPVKSLDEIRRQRTERQR 582
Query: 324 SNDASENGDATEKK 365
A E DA EK+
Sbjct: 583 QAKAREVRDAREKE 596
>SB_29636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 35.1 bits (77), Expect = 0.082
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 159 KKEVAPEEVTSTEPKESPVKKSPAKKVEA-AESNGKENGTDEAPEDSPAENGDAEESNDA 335
K E APEEV + + +ESP ++ K+ +A E KE +E ED+ E E+
Sbjct: 242 KVEDAPEEVEAPKEEESPKEEDTPKEEDAPKEDTPKEEAKEEPKEDTKEEPKKIEDLEKL 301
Query: 336 SE 341
S+
Sbjct: 302 SD 303
Score = 33.1 bits (72), Expect = 0.33
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Frame = +3
Query: 141 ADAAVDKKEVAPEEVTSTEPKESPVKKS----PAKKVEAAESNGKENGTDEAPEDSPAEN 308
A+ +K E PEE E KE ++ P + EAAE G GT++ PED +E+
Sbjct: 33 AEKQPEKVEDKPEEPAKDEEKEEAATEAEAEDPKEDPEAAEIPG---GTEDLPEDEYSED 89
Query: 309 -GDAEESNDASENGDATEKK--ETGVKRKSVALD 401
+ EE+ E G ++ E G + AL+
Sbjct: 90 EAEMEEAPATPEGGTEGDEDALEGGTEEDENALE 123
Score = 29.9 bits (64), Expect = 3.1
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +3
Query: 156 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAP--EDSPAENGDAEESN 329
+K P+E +E+P +++P KVE A + +E+P ED+P E DA + +
Sbjct: 218 NKTPEEPKEDEKVTEEETPKEETP--KVEDAPEEVEAPKEEESPKEEDTPKEE-DAPKED 274
Query: 330 DASENGDATEKKETGVKRKSV 392
E K++T + K +
Sbjct: 275 TPKEEAKEEPKEDTKEEPKKI 295
>SB_26361| Best HMM Match : fn3 (HMM E-Value=0)
Length = 1898
Score = 34.7 bits (76), Expect = 0.11
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +3
Query: 210 PVKKSPAKKVEAAESNGKENGTDE--APEDSPAENGDAEESNDASENGDATEKKETG 374
P KK + V++ + + + G + A +D+ A+NG A + NDA GD + + G
Sbjct: 410 PEKKLYVQTVDSPDDDDEAEGNHDGGAGDDNDADNGGAGDDNDADNGGDGCDGDDDG 466
>SB_10354| Best HMM Match : AT_hook (HMM E-Value=0.045)
Length = 191
Score = 34.7 bits (76), Expect = 0.11
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 8/67 (11%)
Frame = +3
Query: 213 VKKSPAKK-VEAAESNGKENGTDEAPEDSPAENG-----DAEESNDASENGD--ATEKKE 368
+ K P+KK +AAE+ ++ EAPE+ PAE+ + E+ DAS++G+ A +K+
Sbjct: 49 ISKMPSKKGAKAAEAQPEKKA--EAPEEKPAEDSKDQAVEESETKDASKDGEGNAADKRA 106
Query: 369 TGVKRKS 389
G +K+
Sbjct: 107 RGRPKKA 113
Score = 31.5 bits (68), Expect = 1.0
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +3
Query: 132 ATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENG 311
A A+A +KK APEE + + K+ V++S K A +G+ N D+ P +
Sbjct: 58 AKAAEAQPEKKAEAPEEKPAEDSKDQAVEESETKD---ASKDGEGNAADKRARGRP-KKA 113
Query: 312 DAE 320
D E
Sbjct: 114 DGE 116
>SB_7120| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 34.3 bits (75), Expect = 0.14
Identities = 19/81 (23%), Positives = 32/81 (39%)
Frame = +3
Query: 144 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEE 323
D + KK E+ +E + KK S+ + + P D ++
Sbjct: 463 DLSTPKKTALVAEIKKEAEEEEEKEPKSEKKKRKRTSDNESEKEETTPSKLKKSKKDKKK 522
Query: 324 SNDASENGDATEKKETGVKRK 386
+ +A+E D EKKE K+K
Sbjct: 523 AKEATEEDDGEEKKEKKKKKK 543
Score = 29.5 bits (63), Expect = 4.1
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +3
Query: 177 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDAT 356
+E E KE +K K+ ES KE T + S + A+E+ + + +
Sbjct: 478 KEAEEEEEKEPKSEKKKRKRTSDNESE-KEETTPSKLKKSKKDKKKAKEATEEDDGEEKK 536
Query: 357 EKKETGVKRK 386
EKK+ K+K
Sbjct: 537 EKKKKKKKKK 546
>SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)
Length = 521
Score = 34.3 bits (75), Expect = 0.14
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = +3
Query: 144 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEE 323
D DK++ PE+ +P++ P K P K E + N + ++ PED P E+ ++
Sbjct: 433 DKPEDKQQNKPEDKPEDKPEDKPEDK-PEDKPEDKQQNKPKYKPEDKPEDKP-EDKPKDK 490
Query: 324 SNDASENGDATEKKE 368
D E+ + K+
Sbjct: 491 LEDRPEDKPEEKSKD 505
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +3
Query: 144 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEN 308
D DK E PE+ +PK P K P K E + E+ ++ PE+ +N
Sbjct: 453 DKPEDKPEDKPEDKQQNKPKYKPEDK-PEDKPEDKPKDKLEDRPEDKPEEKSKDN 506
>SB_39187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 34.3 bits (75), Expect = 0.14
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 249 ESNGKENGTDEAPEDSPAENGDAEESNDASENGDATE 359
+ +GK + D+ +D ENGD +E++D +EN D E
Sbjct: 48 DDDGKNDDDDKNDDDDDDENGDDDENDDDNENDDDDE 84
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 34.3 bits (75), Expect = 0.14
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Frame = +3
Query: 144 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENG-DAE 320
+AA + + + + ++S KK K+ EA S ++GTDE EDS E+ D +
Sbjct: 1510 EAAANALQEYEAMMKAAADEKSKEKKKRKKEDEATRS---DDGTDEKTEDSMQEDAKDLD 1566
Query: 321 ESNDAS----ENGDATEKKETGVKR 383
SN AS E G EK +T ++R
Sbjct: 1567 SSNTASDTTKEKGKNKEKDKTVLER 1591
>SB_34673| Best HMM Match : UK (HMM E-Value=0.6)
Length = 641
Score = 34.3 bits (75), Expect = 0.14
Identities = 17/76 (22%), Positives = 35/76 (46%)
Frame = +3
Query: 174 PEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDA 353
PEE T + V +P + EA ++ + T++APE S ++ + +++ D
Sbjct: 115 PEETTDVPDRPQEVTTTPDRPQEANDAPDRPQETNDAPERSHEVTNTPDKPQEVTDSPDR 174
Query: 354 TEKKETGVKRKSVALD 401
++++ R A D
Sbjct: 175 LQEEDDAPDRPQEATD 190
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/63 (20%), Positives = 28/63 (44%)
Frame = +3
Query: 174 PEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDA 353
P+E + V +P K E +S + D+AP+ +++ S +A++ D
Sbjct: 145 PQETNDAPERSHEVTNTPDKPQEVTDSPDRLQEEDDAPDRPQEATDESDRSQEATDEPDR 204
Query: 354 TEK 362
+ +
Sbjct: 205 SHE 207
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/65 (20%), Positives = 31/65 (47%)
Frame = +3
Query: 174 PEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDA 353
P+E T + V +P + EA ++ + T +AP+ S + ++A++ D
Sbjct: 245 PQETTDVPDRSQEVTNTPDRPQEANDAPDRPEKTIDAPDRSQKTTDTPDRPHEATDEPDR 304
Query: 354 TEKKE 368
+++ +
Sbjct: 305 SQEAD 309
>SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061)
Length = 2735
Score = 34.3 bits (75), Expect = 0.14
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = +3
Query: 192 TEPKESPVKKSPAKKVEAAESNGKENG-TDEAPEDSPAENGDAEESNDASENGDATEKKE 368
T+P+E P +K AK E ES K+ G TDE +S +GD E + A E+ T +KE
Sbjct: 172 TKPEEEPEEKDEAK--EKYESEEKDEGSTDEKDLES---SGDDTEVSGAQEDNPKTLQKE 226
Query: 369 TGVK--RKSVAL 398
K RK++ +
Sbjct: 227 KHAKGERKNLVM 238
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 33.9 bits (74), Expect = 0.19
Identities = 16/77 (20%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Frame = +3
Query: 138 MADAAVDKKEVAPEEVTSTEPKE----SPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE 305
M D++ ++ +E S++P E +P K+P K + + ++ DE+ E ++
Sbjct: 780 MEDSSANRSISPVKERASSKPSEKAMEAPSGKAPDTKQKERKKTDSDSDDDESSESDSSD 839
Query: 306 NGDAEESNDASENGDAT 356
+ D+ +++D+ ++ D++
Sbjct: 840 DEDSSDTSDSDDSSDSS 856
>SB_3165| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1183
Score = 33.5 bits (73), Expect = 0.25
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +3
Query: 129 LATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPA-E 305
+A+ A A + E A E + E E+ + EA+E+ G+ + EA E A E
Sbjct: 41 VASKASEAGEASE-AGEASEAGEASEAGEASEAGEAGEASEA-GEASEAGEASEAGKASE 98
Query: 306 NGDAEESNDASENGDATEKKETGV 377
G+A + +ASE G+ E E GV
Sbjct: 99 AGEASVAGEASEAGETVEASEAGV 122
Score = 33.5 bits (73), Expect = 0.25
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 222 SPAKKVEAAESNGKENGTDEAPEDSPA-ENGDAEESNDASENGDATEKKETG 374
S +V A G+ EA E A E G+A E+ +ASE G+A+E E G
Sbjct: 175 SEVGEVSEASEAGEAGEASEAVEAGEASEAGEASEAGEASEAGEASEAGEAG 226
Score = 33.1 bits (72), Expect = 0.33
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = +3
Query: 171 APEEVTSTEPKESPVKKSPAKKVEAAESN--GKENGTDEAPEDSPA----ENGDAEESND 332
A E V + E E+ + EA E++ G+ EA E S A E G+A + +
Sbjct: 192 ASEAVEAGEASEAGEASEAGEASEAGEASEAGEAGEASEAGEASEAGKASEAGEASVAGE 251
Query: 333 ASENGDATEKKETGV 377
ASE G+ E E GV
Sbjct: 252 ASEAGETVEASEAGV 266
Score = 33.1 bits (72), Expect = 0.33
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +3
Query: 195 EPKESPVKKSPAKKVEAAESNG--KENGTDEAPEDSPA-ENGDAEESNDASENGDATEKK 365
E E+ + +EA E G + G EA ED A E G A E+ ASE G+ +E
Sbjct: 553 EASEAGGASEAGEAIEAGEDGGASEAGGASEAGEDGGAGEAGGASEAGGASEAGEVSEAG 612
Query: 366 E 368
E
Sbjct: 613 E 613
Score = 32.7 bits (71), Expect = 0.44
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Frame = +3
Query: 168 VAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPA----ENGDAEESNDA 335
VA E + E E+ ++ EA E+ G+ + EA E S A E G+A E+ +A
Sbjct: 161 VAREASEAGEASEASEVGEVSEASEAGEA-GEASEAVEAGEASEAGEASEAGEASEAGEA 219
Query: 336 SENGDATEKKETG 374
SE G+A E E G
Sbjct: 220 SEAGEAGEASEAG 232
Score = 32.3 bits (70), Expect = 0.58
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Frame = +3
Query: 132 ATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPA--- 302
A+ A A + E A E +TE E ++ EA E+ G+ EA E S A
Sbjct: 406 ASEAGVAGEASE-AGEASEATEADEVGEVSEASEAGEAGEA-GEAGEASEAGEASEAGEV 463
Query: 303 --ENGDAEESNDASENGDATEKKETG 374
G+A E+ +A E G+A+E ETG
Sbjct: 464 CEAGGEASEAGEAGEIGEASEAGETG 489
Score = 32.3 bits (70), Expect = 0.58
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Frame = +3
Query: 189 STEPKESPVKKSPAKKVEAAESNG--KENGTDEAPEDSPA----ENGDAEESNDASENGD 350
++E E+ +K EA+++ G + G EA E S A E G+A E+ ASE G+
Sbjct: 506 ASEASETIEAGEASKAGEASKAGGVSEAGGASEAGEASEAGGASEAGEASEAGGASEAGE 565
Query: 351 ATEKKETG 374
A E E G
Sbjct: 566 AIEAGEDG 573
Score = 31.5 bits (68), Expect = 1.0
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +3
Query: 168 VAPEEVTSTEPKESPVKKSPAKKVEAAE-SNGKENG-TDEAPEDSPA-ENGDAEESNDAS 338
VA E + E E+ ++ EA E S E G EA E S A E G+A E+ +AS
Sbjct: 305 VAREASEAGEASEASEVGEVSEASEAGEASEAVEAGEASEAGEASKASEAGEASEAGEAS 364
Query: 339 ENGDATEKKE 368
E G+A E E
Sbjct: 365 EAGEAGEASE 374
Score = 30.7 bits (66), Expect = 1.8
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 222 SPAKKVEAAESNGKENGTDEAPEDSPA-ENGDAEESNDASENGDATEKKETG 374
S +V A G+ + EA E S A E A E+ +ASE G+A+E E G
Sbjct: 319 SEVGEVSEASEAGEASEAVEAGEASEAGEASKASEAGEASEAGEASEAGEAG 370
Score = 30.7 bits (66), Expect = 1.8
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 171 APEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPA-ENGDAEESNDASENG 347
A E ++E E+ ++ EA E+ G++ G EA S A E+G A E+ ASE G
Sbjct: 542 ASEAGGASEAGEASEAGGASEAGEAIEA-GEDGGASEAGGASEAGEDGGAGEAGGASEAG 600
Query: 348 DATEKKE 368
A+E E
Sbjct: 601 GASEAGE 607
Score = 30.3 bits (65), Expect = 2.3
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +3
Query: 171 APEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPA-ENGDAEE---SNDAS 338
A E + E E+ V + EA E+ G+ EA E A E G+A E + +AS
Sbjct: 252 ASEAGETVEASEAGVAGEVGEVSEAGEA-GEVGKASEAGETGEASEAGEASEVGVAREAS 310
Query: 339 ENGDATEKKETG 374
E G+A+E E G
Sbjct: 311 EAGEASEASEVG 322
Score = 29.5 bits (63), Expect = 4.1
Identities = 21/77 (27%), Positives = 36/77 (46%)
Frame = +3
Query: 129 LATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEN 308
+A A A + E A E +E E+ ++ VEA E++ ++ E
Sbjct: 161 VAREASEAGEASE-ASEVGEVSEASEAGEAGEASEAVEAGEASEAGEASEAGEASEAGEA 219
Query: 309 GDAEESNDASENGDATE 359
+A E+ +ASE G+A+E
Sbjct: 220 SEAGEAGEASEAGEASE 236
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/80 (23%), Positives = 35/80 (43%)
Frame = +3
Query: 153 VDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESND 332
V + A E ++E E+ + EA E++ ++ +E G+A E+
Sbjct: 180 VSEASEAGEAGEASEAVEAGEASEAGEASEAGEASEAGEASEAGEAGEASEAGEASEAGK 239
Query: 333 ASENGDATEKKETGVKRKSV 392
ASE G+A+ E ++V
Sbjct: 240 ASEAGEASVAGEASEAGETV 259
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +3
Query: 228 AKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKS 389
+K EA E++ ++ E +A E+ +ASE G+A+E E K+
Sbjct: 43 SKASEAGEASEAGEASEAGEASEAGEASEAGEAGEASEAGEASEAGEASEAGKA 96
Score = 28.3 bits (60), Expect = 9.4
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +3
Query: 195 EPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKE 368
E E V + ++ EA+E++ ++ + E +A E+ +ASE G+A+E E
Sbjct: 155 EASEVGVAREASEAGEASEASEVGEVSEASEAGEAGEASEAVEAGEASEAGEASEAGE 212
Score = 28.3 bits (60), Expect = 9.4
Identities = 19/74 (25%), Positives = 33/74 (44%)
Frame = +3
Query: 153 VDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESND 332
V K A E ++E E+ + EA E++ + + E +A E+ +
Sbjct: 282 VGKASEAGETGEASEAGEASEVGVAREASEAGEASEASEVGEVSEASEAGEASEAVEAGE 341
Query: 333 ASENGDATEKKETG 374
ASE G+A++ E G
Sbjct: 342 ASEAGEASKASEAG 355
>SB_56912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 443
Score = 33.5 bits (73), Expect = 0.25
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 234 KVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKET 371
K E +E+NG ENG +EA E+ PA D + A+E + +T
Sbjct: 313 KNEDSEANGDENGHNEASEEKPALKRDGTMAVTAAEGAEILGDHDT 358
>SB_52178| Best HMM Match : Drf_FH1 (HMM E-Value=2.2)
Length = 404
Score = 33.5 bits (73), Expect = 0.25
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +3
Query: 183 VTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEK 362
+T P S KK K A S K+ E+P+ SPA G E ++ + E G ++
Sbjct: 265 LTDVPPLTSKEKKHEKTKT-AKPSKAKKPKKSESPQRSPANTG-IESASGSGETGTKPKR 322
Query: 363 KE--TGVKRK 386
K+ T +KRK
Sbjct: 323 KKPGTAIKRK 332
>SB_12462| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 803
Score = 33.5 bits (73), Expect = 0.25
Identities = 20/77 (25%), Positives = 33/77 (42%)
Frame = +3
Query: 156 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDA 335
D++ VA + V+S P+ A + S G NG+ EAPE+ + E+ D
Sbjct: 459 DEEGVAAQGVSSVTPEAGSALSVIALEERGRSSTGSPNGSLEAPEELQEKMVGGEKKGDT 518
Query: 336 SENGDATEKKETGVKRK 386
++K + RK
Sbjct: 519 KLKEKRKQRKAYAMSRK 535
>SB_1091| Best HMM Match : Cupin_4 (HMM E-Value=0)
Length = 584
Score = 33.5 bits (73), Expect = 0.25
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Frame = +3
Query: 144 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEE 323
D KK EE E K KKS K K+ E D+ E G +
Sbjct: 484 DGKKTKKGKKKEESEEEEEKSEEEKKSKKKTKTKKGKKEKQESESEEESDAEYELGTEDS 543
Query: 324 SNDASE-NGDATEKKETG 374
S D+ E +G +E +E+G
Sbjct: 544 SEDSGEESGPDSEDEESG 561
Score = 31.9 bits (69), Expect = 0.77
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Frame = +3
Query: 159 KKEVAPEEVTSTEPKESPVKKSPAKK--VEAAESNGKEN-------GTDEAPEDSPAENG 311
KKE + EE +E ++ KK+ KK E ES +E GT+++ EDS E+G
Sbjct: 493 KKEESEEEEEKSEEEKKSKKKTKTKKGKKEKQESESEEESDAEYELGTEDSSEDSGEESG 552
Query: 312 DAEESNDASE 341
E ++ +
Sbjct: 553 PDSEDEESGK 562
>SB_35523| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1410
Score = 33.1 bits (72), Expect = 0.33
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 249 ESNGKENGTDEAPEDSPAENG-DAEESNDASENGDATEKKETG 374
+S+G E G+D+ PE A +G DA ES + + TE E G
Sbjct: 1306 DSSGDEAGSDDEPESEYAPSGSDAAESEEDEDFSSETETSEEG 1348
>SB_30368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 33.1 bits (72), Expect = 0.33
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 177 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPA-ENGDAEESNDASENGDA 353
E +E K V+ + A G+ + EA E S A E G+A E+ +ASE G+
Sbjct: 8 EHRRKSEAKPRLVQPLDKNRAGGASEAGEASEAGEASEASEASEAGEASEAGEASEAGEV 67
Query: 354 TEKKETG 374
E E G
Sbjct: 68 GEAGEAG 74
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 240 EAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETG 374
EA+E+ ++ + +E G+A E+ + E G+A E E G
Sbjct: 36 EASEAGEASEASEASEAGEASEAGEASEAGEVGEAGEAGEAGEAG 80
>SB_17147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 33.1 bits (72), Expect = 0.33
Identities = 20/74 (27%), Positives = 29/74 (39%)
Frame = +3
Query: 162 KEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASE 341
+E EE E E V + E E N +E G+DE E + E + E
Sbjct: 314 EEAGDEEDLEAEDDEGEVDIEEGYREETGEENDEEVGSDEEGEVDIERGYEEETGEENDE 373
Query: 342 NGDATEKKETGVKR 383
E++E +KR
Sbjct: 374 EAGYDEEEEVEIKR 387
>SB_36081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 424
Score = 32.7 bits (71), Expect = 0.44
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 159 KKEVAPEEVTSTEPK-ESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEE 323
K E + EE T+ P+ ESP KK +K E E +EA + ENG+ ++
Sbjct: 355 KHEKSDEEETAATPEVESPPKKHKKEKKSKKEKTKTEESDEEADISAVLENGEKKK 410
>SB_15757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 32.7 bits (71), Expect = 0.44
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = +3
Query: 162 KEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASE 341
+E EE E + P ++ PA++ ES +EN +E E+S + D + E
Sbjct: 13 EEEKTEEAAPAEGEAPPAEEKPAEE----ESKPEENKEEEKKEESEKKEEDKTDGGGGGE 68
Query: 342 NGDATEKKE 368
EKKE
Sbjct: 69 EKKDEEKKE 77
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +3
Query: 249 ESNGKENGTDEAP----EDSPAENGDAEESNDASENGDATEKKETGVKRKSVALD 401
E+ G+E T+EA E PAE AEE + EN + EKKE K++ D
Sbjct: 9 EAGGEEEKTEEAAPAEGEAPPAEEKPAEEESKPEENKE-EEKKEESEKKEEDKTD 62
>SB_13696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 676
Score = 32.7 bits (71), Expect = 0.44
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 144 DAAVDKKEVAPEEVTSTEPK-ESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAE 320
DA++ +KE E TST K E +++ K + +E K T ++ EDS D+E
Sbjct: 372 DASLKQKEQLAETATSTNSKVEVDIQEGSTKIIPLSEETVKSTVTQDSKEDSEPVTPDSE 431
>SB_11869| Best HMM Match : Excalibur (HMM E-Value=8)
Length = 269
Score = 32.7 bits (71), Expect = 0.44
Identities = 20/76 (26%), Positives = 41/76 (53%)
Frame = +3
Query: 147 AAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEES 326
AA ++E AP++ + + + + + E +++ + N TD++ ED+ +A+
Sbjct: 144 AAPKQEEEAPKDEAAASEEVAAATEGTSAATETNDASAEVNETDKSAEDA----SEAKPE 199
Query: 327 NDASENGDATEKKETG 374
+DA+E G A +ETG
Sbjct: 200 DDAAE-GAAIPSEETG 214
Score = 29.5 bits (63), Expect = 4.1
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Frame = +3
Query: 159 KKEVA-PEEVTSTEPK---ESPVKKSPAKKVEAAESNGKENGTDEAP---EDSPAENGD- 314
K+E A P + T+T+ +P +++P++ AA +E DEA E + A G
Sbjct: 112 KEEAASPSDETTTDSPWDASAPTEEAPSRDEAAAPKQEEEAPKDEAAASEEVAAATEGTS 171
Query: 315 -AEESNDASENGDATEK 362
A E+NDAS + T+K
Sbjct: 172 AATETNDASAEVNETDK 188
Score = 28.7 bits (61), Expect = 7.1
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +3
Query: 156 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDA 335
DK + A E +EP+E PV E A+ + +E T+E ++ PA+ A S++
Sbjct: 70 DKADGAGCEQVESEPREEPVG-------EEAKVSHQETITEEPAKEEPAKEEAASPSDET 122
Query: 336 SENG--DATEKKETGVKRKSVA 395
+ + DA+ E R A
Sbjct: 123 TTDSPWDASAPTEEAPSRDEAA 144
>SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1789
Score = 32.7 bits (71), Expect = 0.44
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Frame = +3
Query: 147 AAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNG---KENGTDEAPE-DSPAENGD 314
A + K+ PEE S PK + +S K E+ + G K+ G E + +S + G+
Sbjct: 1484 ATPEPKKEEPEEKPSPSPKTANKSESEKGKGESEKDKGESEKDKGESEKDKGESEKDKGE 1543
Query: 315 AEESNDASENGDATEKKE 368
+E+ SE +KE
Sbjct: 1544 SEKDKGESEKEKCQSEKE 1561
Score = 32.7 bits (71), Expect = 0.44
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +3
Query: 144 DAAVDKKEVAPEEVTSTEPKE-SPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAE 320
D K E +PE V TE E + V+ K ++ E GK++ + + ED+ E E
Sbjct: 1617 DGEEQKVEKSPESVDKTEGHERTDVEDDEKKADDSNEDIGKKDESRDQAEDAKKEESKTE 1676
Query: 321 ESNDASENGDATEKKETG 374
E +E ++++ETG
Sbjct: 1677 EMETDAE----SKQEETG 1690
Score = 32.3 bits (70), Expect = 0.58
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +3
Query: 168 VAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPE-DSPAENGDAEESNDASEN 344
VA E EP+E P SP+ K + K G E + +S + G++E+ SE
Sbjct: 1483 VATPEPKKEEPEEKP---SPSPKTANKSESEKGKGESEKDKGESEKDKGESEKDKGESEK 1539
Query: 345 GDATEKKETGVKRK 386
+K+ G K
Sbjct: 1540 DKGESEKDKGESEK 1553
>SB_35674| Best HMM Match : SH2 (HMM E-Value=0)
Length = 871
Score = 32.7 bits (71), Expect = 0.44
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +3
Query: 144 DAAVDKKEVAPEEVTSTEPKE-SPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAE 320
D K E +PE V TE E + V+ K ++ E GK++ + + ED+ E E
Sbjct: 196 DGEEQKVEKSPESVDKTEGHERTDVEDDEKKADDSNEDIGKKDESRDQAEDAKKEESKTE 255
Query: 321 ESNDASENGDATEKKETG 374
E +E ++++ETG
Sbjct: 256 EMETDAE----SKQEETG 269
>SB_29898| Best HMM Match : Chromadorea_ALT (HMM E-Value=0.0085)
Length = 350
Score = 32.7 bits (71), Expect = 0.44
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +3
Query: 189 STEPKESPVKKSPAKKVEAAESNGKENG-TDEAPEDSPAENGDAEESNDASENGDATEKK 365
+TE + SP + K E +G+E+ T E PED + +E+ +EN A +K
Sbjct: 23 TTEEELSPAAQDETKDEPLQEDDGEEDEETQEEPEDDSEGGTENDENPGEAENEVAEVEK 82
Query: 366 ETGVKRK 386
+ V K
Sbjct: 83 DENVPEK 89
>SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 32.3 bits (70), Expect = 0.58
Identities = 15/76 (19%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +3
Query: 156 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKE--NGTDEAPEDSPAENGDAEESN 329
+ +E + EE + S + + E E G+E +G+D + ++ ++GD E
Sbjct: 375 NNQETSDEESDGSSEVSSESESGSDAESEEGEGEGEEVSSGSDSSTDEEGTDDGDEEGGE 434
Query: 330 DASENGDATEKKETGV 377
+ ++ D ++ ++G+
Sbjct: 435 EDDDDDDDDDENQSGI 450
>SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8)
Length = 360
Score = 32.3 bits (70), Expect = 0.58
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 144 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE 305
D DK E PEE +P+E P + +P K E + + E+ ++ PE P +
Sbjct: 304 DKLEDKPEDRPEEKPEDKPEEKP-EDNPEDKPEYKQEDKPEDKQEDKPECKPED 356
Score = 29.1 bits (62), Expect = 5.4
Identities = 18/60 (30%), Positives = 34/60 (56%)
Frame = +3
Query: 165 EVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASEN 344
E++P+ T+ K S +K+ K+ + +N E+ DE PED+P E+ +++ D E+
Sbjct: 18 EISPKTGRKTDRKTS--RKTSLKR--SLTTNKPEDNADEKPEDNP-EDKPEDKTEDRPED 72
>SB_20305| Best HMM Match : PT (HMM E-Value=1.8)
Length = 127
Score = 32.3 bits (70), Expect = 0.58
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +3
Query: 138 MADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE-NGD 314
M D DK E PE+ +PK+ KS K + E N E+ ++ P D P + D
Sbjct: 1 MEDKPEDKPEDKPEDKPEGKPKDKSEDKSGDKPQDKPE-NKPEDQPEDKPGDKPEDKTED 59
Query: 315 AEESNDASENGDATEKK 365
E + D E K
Sbjct: 60 KPEDKPEDKPEDKPEDK 76
>SB_344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 510
Score = 32.3 bits (70), Expect = 0.58
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +3
Query: 195 EPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETG 374
+ ++SP+ + K + A+S+ + + P D G +E + D +EN DA E K +
Sbjct: 286 DTQKSPIDQREQKAEDKADSSKEADVKMNEPADVAIVRGQSEGAEDENENNDA-ENKASK 344
Query: 375 VKRKSVALD 401
+ +SV D
Sbjct: 345 RESRSVEKD 353
Score = 31.9 bits (69), Expect = 0.77
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +3
Query: 201 KESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVK 380
++SP+ + K + A+S+ + + P D G +E + D +EN DA E K + +
Sbjct: 403 QKSPIDQREQKAEDKADSSKEADVKMNEPADVAIVRGQSEGAEDKNENNDA-ENKASKRE 461
Query: 381 RKSVALD 401
+SV D
Sbjct: 462 SRSVEKD 468
>SB_32573| Best HMM Match : His_leader (HMM E-Value=0.0014)
Length = 134
Score = 31.9 bits (69), Expect = 0.77
Identities = 14/56 (25%), Positives = 22/56 (39%)
Frame = -2
Query: 435 SSREWSFLLFLHQEPQISSSHQSLSFLWHHRSQMHRCFLQHHHFQQANLLGLHRYH 268
SS ++ H P SSS S+ + HH + HHH + + +H
Sbjct: 76 SSSSSIIIIIHHHHPSSSSSSSSIIIIHHHHPSSSSIIIIHHHHHHPSSSSIINHH 131
>SB_18984| Best HMM Match : DNA_topoisoIV (HMM E-Value=0)
Length = 1182
Score = 31.9 bits (69), Expect = 0.77
Identities = 19/73 (26%), Positives = 37/73 (50%)
Frame = +3
Query: 171 APEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGD 350
+P + + + K++P KK+PAK + + + K+ + + E +S+D E G
Sbjct: 1047 SPPKPAAGKTKKAPAKKAPAKSKKGSMPDPKQTTLFASMGKTSKEAQSLSDSDD--ELGS 1104
Query: 351 ATEKKETGVKRKS 389
EK++ K+KS
Sbjct: 1105 LLEKQKVSPKKKS 1117
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 31.9 bits (69), Expect = 0.77
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +3
Query: 168 VAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPED-SPAE---NGDAEESNDA 335
V+P+ + + + SP++K AK+ + + G E+P + SP+ GD +
Sbjct: 587 VSPQTSGTDQSQSSPLEKEVAKQESQPNVSPQSGGKQESPANTSPSPERVEGDGSQQGTT 646
Query: 336 SENGDATEKKETGVKRK 386
+ NG E GV ++
Sbjct: 647 AVNGSQQETTVNGVSQQ 663
>SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 31.9 bits (69), Expect = 0.77
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +3
Query: 150 AVDKKEVAPEEVTSTE---PKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAE 320
A KEV EEV S ++S + K+VE E DE ++ N D
Sbjct: 215 AAQTKEVEEEEVRSNRGNLDEQSTEANAQTKEVEEEEVRSNRGNLDEQSTEANGNNTDT- 273
Query: 321 ESNDASENGDATEK 362
S+D+ ++ D EK
Sbjct: 274 HSDDSEKDSDDDEK 287
Score = 29.9 bits (64), Expect = 3.1
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +3
Query: 207 SPVKKSPAKKVEAAESNGKENGTDEAP--EDSPAENGDAEE-SNDASENGDATEKKETGV 377
SP KK P K E + K+ D+ DS E + + N EN D +K+ETGV
Sbjct: 67 SPEKK-PEKTGETQDKGNKKGKDDKGDGGRDSKDEGSNEKNVKNGVRENPDRDDKEETGV 125
>SB_32475| Best HMM Match : IWS1_C (HMM E-Value=0)
Length = 768
Score = 31.1 bits (67), Expect = 1.3
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +3
Query: 156 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDA 335
++++ A E ST K P ++ +A++ N EN +PE S E + EE +
Sbjct: 85 EEEDGARAEHRSTGEKTLPTAENKQDMEDASDDNKSENVA--SPECSNEEEKEPEEIKNK 142
Query: 336 SENGDATEK 362
SE GD+ ++
Sbjct: 143 SEMGDSDKE 151
>SB_29142| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 147
Score = 31.1 bits (67), Expect = 1.3
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Frame = +3
Query: 132 ATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPE-DSPAEN 308
AT+ A + V +E +++EP ++P + A EA + G E+ EA + DS +
Sbjct: 37 ATLPPVAEGDESV--DEPSASEPTQAPATQG-ATTAEAPAAEGNEDERQEAKDADSESAA 93
Query: 309 GDA------EESNDASENGDATEKKE 368
G+A + D+++ G A E KE
Sbjct: 94 GEAVSGEAGARAEDSAQKGAAEESKE 119
>SB_19851| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/58 (20%), Positives = 27/58 (46%)
Frame = +3
Query: 177 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGD 350
+E E E P P ++ ++ + N +N + +D +N D ++ +D ++ D
Sbjct: 79 KEAREAEEPEDPSLPPPIERPDSEDDNDDDNDDGDNDDDDDDDNNDDDDDDDDDDDDD 136
>SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10)
Length = 783
Score = 31.1 bits (67), Expect = 1.3
Identities = 23/72 (31%), Positives = 33/72 (45%)
Frame = +3
Query: 183 VTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEK 362
V + P P + PAK AAE +E G E ED E GD ++ + E+
Sbjct: 363 VEADTPGSEPPAEEPAKPDSAAE---QEEGK-EGDEDEDGEGGDKKKKKKKKKK-KGVEE 417
Query: 363 KETGVKRKSVAL 398
+E VK+ + AL
Sbjct: 418 EEKKVKKPNKAL 429
Score = 28.7 bits (61), Expect = 7.1
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 246 AESNGKENGTDE-APEDSPAENGDAEESNDASENGDATEKKETGVKRKSVALD 401
A++ G E +E A DS AE + +E D E+G+ +KK+ K+K ++
Sbjct: 365 ADTPGSEPPAEEPAKPDSAAEQEEGKEG-DEDEDGEGGDKKKKKKKKKKKGVE 416
Score = 28.3 bits (60), Expect = 9.4
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +3
Query: 171 APEEVTSTEP-KESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENG 347
A E+ T +P + KK P + + +E DE+ +++ E D +E++D E
Sbjct: 512 AEEQDTVKKPVRYGARKKKPQQHQQQESDKQEETAPDESEKET--ETDDTKETDDTKETE 569
Query: 348 DATEKKE 368
D E ++
Sbjct: 570 DTKETED 576
>SB_3098| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = +3
Query: 249 ESNGKENG----TDEAPEDSPAENGDAEESNDASENGDATEKKE 368
ESNG ENG T+E P S +E+ EE+ + G +E K+
Sbjct: 25 ESNGAENGVPSDTEEKPLSSTSEHDSNEENEAPANEGSDSEDKD 68
>SB_50934| Best HMM Match : HSP90 (HMM E-Value=0)
Length = 855
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 273 TDEAPEDSPAENGDAEESNDASENGD-ATEKKETGVK 380
T E PE +P + DA +S DAS D A +++E +K
Sbjct: 24 TKEEPESAPKVDDDAGKSRDASRTDDEAVQREEEAIK 60
>SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 31.1 bits (67), Expect = 1.3
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +3
Query: 171 APEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSP--AENGDAEESNDASEN 344
A +V E K K E ++ EN TD A E+ E+G++E +D +
Sbjct: 527 AKPQVEEMSEGEDEAPKGETDKAEESQPIASENKTDIAEENQSDVPESGNSENDDDDDGD 586
Query: 345 GDATEKKETG 374
GD + + G
Sbjct: 587 GDDDDDDDDG 596
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/71 (21%), Positives = 30/71 (42%)
Frame = +3
Query: 162 KEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASE 341
++ AP+ T + P+ K + AE N + E+ ++GD ++ +D +
Sbjct: 538 EDEAPKGETDKAEESQPIASE--NKTDIAEENQSDVPESGNSENDDDDDGDGDDDDDDDD 595
Query: 342 NGDATEKKETG 374
GD + G
Sbjct: 596 GGDDDNDDDGG 606
>SB_14943| Best HMM Match : CRAL_TRIO (HMM E-Value=8e-05)
Length = 391
Score = 31.1 bits (67), Expect = 1.3
Identities = 26/67 (38%), Positives = 31/67 (46%)
Frame = +3
Query: 174 PEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDA 353
P E S +P SPVK++P K V S E TDE E ENG +N +NG
Sbjct: 255 PAESKSDKPS-SPVKETPVKNV---PSTASEESTDE--EKKSTENGKQYVTN-GKDNG-K 306
Query: 354 TEKKETG 374
KE G
Sbjct: 307 NNIKENG 313
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 162 KEVAPEEVTSTEPKESP-VKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEE 323
KE + V ST +ES +K + + +NGK+NG + E+ EN D EE
Sbjct: 268 KETPVKNVPSTASEESTDEEKKSTENGKQYVTNGKDNGKNNIKENGHQEN-DLEE 321
>SB_12646| Best HMM Match : SSrecog (HMM E-Value=0)
Length = 783
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 177 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPA-ENGDAEESNDASENGDA 353
E + + + SP KKSP+KK A K + ++ +++ ++ + ES+ S + +A
Sbjct: 609 ENKKNDKEESSPKKKSPSKKASKAPKEEKSSSPRKSLDNNQKFKSAEFVESSGDSSDSEA 668
Query: 354 TEKKE 368
+KK+
Sbjct: 669 EKKKQ 673
>SB_9849| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 984
Score = 31.1 bits (67), Expect = 1.3
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Frame = +3
Query: 156 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNG-----KENGTDEAPEDSPAENGDAE 320
+K EE + KE K+ K + AE+NG K G +AP+++
Sbjct: 463 EKSTKENEETAEEKAKECLTSKTEEKAEQQAETNGEDAAIKSEGEAKAPQENGGNTAGKT 522
Query: 321 ESNDASEN 344
D SEN
Sbjct: 523 NKTDTSEN 530
>SB_52574| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 298
Score = 30.7 bits (66), Expect = 1.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 252 SNGKENGTDEAPEDSPAENGDAEESNDASENGDA 353
S+G N +DE E S GD +E++ + NGD+
Sbjct: 30 SSGSSNSSDEEREKSSQTAGDEDENSQENVNGDS 63
>SB_36169| Best HMM Match : DUF676 (HMM E-Value=0)
Length = 2442
Score = 30.7 bits (66), Expect = 1.8
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 9/81 (11%)
Frame = +3
Query: 144 DAAVDKKEVAPEEVTSTEPKES------PVKKSPAKKVEAAESNGKENGTDEAP---EDS 296
D +++++ A E T KE P ++ +E + +++G DE P D
Sbjct: 283 DEKLEEEKDAMSEATGANTKEEFESDILPNSETSTLAIETRKDLERDSGIDENPFRESDK 342
Query: 297 PAENGDAEESNDASENGDATE 359
++NG E N E+GD E
Sbjct: 343 LSDNGQEYELNREQESGDTKE 363
>SB_28831| Best HMM Match : GCK (HMM E-Value=3.1)
Length = 320
Score = 30.7 bits (66), Expect = 1.8
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +3
Query: 177 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASE--NGD 350
E++ + + ++ +K AKK+ A + + T PE +PA N + S++ S+ N
Sbjct: 71 EQLPTEDQQDGAEEKRSAKKLPAPSATSQ---TSPQPESAPALNAETSHSDEPSKPTNKQ 127
Query: 351 ATEKKETGVKRKSVA 395
E+K+ + K A
Sbjct: 128 VDEEKDYSTELKGEA 142
>SB_57515| Best HMM Match : CBFNT (HMM E-Value=3.3)
Length = 213
Score = 30.7 bits (66), Expect = 1.8
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +3
Query: 162 KEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASE 341
K+ A E + + K+ VE E G+E +EA E++PAE D +E
Sbjct: 144 KDKAGSETSLNAADDEETKEKTEIAVEE-EKEGEEFKREEAAEETPAEVADGKEKKQRRR 202
Query: 342 NGDATEKKE 368
++KK+
Sbjct: 203 RFSFSKKKK 211
>SB_47910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 486
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 252 SNGKENGTDEAPEDSPAE--NGDAEESNDASENGDATEKKETGVKRKS 389
SNG +NG E ED+P E +GD S+ + NGDA + T R++
Sbjct: 333 SNGVDNGVAE-DEDAPMEMEDGDESTSSSSVINGDAPTDEVTLSPRRN 379
>SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14)
Length = 966
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +3
Query: 165 EVAPEEVTST--EPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE 305
EV PEEV + K +PV+ P + E S E E PE P+E
Sbjct: 725 EVVPEEVEVDVKQTKSTPVESEPTETPEVVPSEKLEGIQAEVPEVMPSE 773
Score = 28.7 bits (61), Expect = 7.1
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +3
Query: 150 AVDKKEVAPEEVTSTEPK-ESPVKKS--PAKKVEAAESNGKENGTDEAPEDSPAEN-GDA 317
A +K E+ EV P E V + P ++ E + E T+E PE P E D
Sbjct: 787 AFEKPEIIHTEVPEVMPAAEQAVPREIFPTEETEVIPTEETEEYTEE-PEVVPTEEPSDE 845
Query: 318 EESNDASENGDATEKKE 368
EES +A + E+ +
Sbjct: 846 EESEEAGREKEEEEEDQ 862
>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +3
Query: 156 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKE---NGTDEAPEDSPAENGDAEES 326
+ +E EE + + +E + AK + +E+ K + DE +D E + +ES
Sbjct: 689 ESEEEESEEESEEDEEEGAKPSASAKIAKTSETENKVPKVDKDDEEDDDDEEEESEEDES 748
Query: 327 NDASENGDATEKKETGVKRK 386
N S +K++ K+K
Sbjct: 749 NKPSSRQVTAKKEDKKGKKK 768
Score = 29.9 bits (64), Expect = 3.1
Identities = 18/77 (23%), Positives = 38/77 (49%)
Frame = +3
Query: 156 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDA 335
D+ E A E+ T+ ++ K P +K + +GKE+ +E E+ ++GD +++
Sbjct: 868 DEDEEAEEDGEKTKKGKTDKKDKPKEK---KKKSGKEDEDEEEDEEEENKDGDNIDADKK 924
Query: 336 SENGDATEKKETGVKRK 386
+ A K+ K++
Sbjct: 925 EDTTVAEGDKKAAAKKE 941
>SB_37674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 30.3 bits (65), Expect = 2.3
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +3
Query: 159 KKEVAPEEVTSTEP---KE-SPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEES 326
K+E PE++ ++EP KE S K A K E A+ E + PAE A+ S
Sbjct: 508 KEEAEPEQMDTSEPEPAKEPSSEIKPEASKPETAKPEATSPTDGEPAKPEPAEESSAKPS 567
Query: 327 NDA 335
+A
Sbjct: 568 EEA 570
>SB_702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1396
Score = 30.3 bits (65), Expect = 2.3
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 255 NGKENGTDEAPEDSPAE--NGDAEESNDASENGDATEKKETGVKRKSVAL 398
N ++ G+ EDSP GD+ + + A E GD+++ + +G R+ +L
Sbjct: 769 NSEDAGSSLGEEDSPGSCLEGDSCDLSGAREEGDSSDSESSGPARRPRSL 818
>SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 29.9 bits (64), Expect = 3.1
Identities = 15/71 (21%), Positives = 33/71 (46%)
Frame = +3
Query: 156 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDA 335
+KK ++ + E K++P K A K +++G ++ E E DA+ + +
Sbjct: 220 EKKLTQKKKGKTPEQKKTPGTKKAASKQRHPTDEKRKDGQEKVEEKEKGEVEDAQTTEEE 279
Query: 336 SENGDATEKKE 368
+ + E+K+
Sbjct: 280 EKQKEEAERKK 290
Score = 29.1 bits (62), Expect = 5.4
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = +3
Query: 186 TSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKK 365
TST+ + KKS K+ ++ + + K++ +DE E E AEE D + T++
Sbjct: 100 TSTQKQALTRKKS--KQSDSEDEDEKKSESDEPVETESEEESSAEEEEDEYKPEPKTKRT 157
Query: 366 ETGVKR 383
+ K+
Sbjct: 158 KASDKK 163
>SB_36131| Best HMM Match : His_leader (HMM E-Value=2.7e-10)
Length = 416
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = -2
Query: 420 SFLLFLHQEPQISSSHQSLSFLWHHRSQMHRCFLQHHHFQQANLLGLHRYH 268
S ++ H P S S+ + HH S + HHH ++++ +H +H
Sbjct: 97 SIIIIHHHHP----SSSSIIIIHHHPSSSIIIIIHHHHPSSSSIIIIHHHH 143
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = -2
Query: 420 SFLLFLHQEPQISSSHQSLSFLWHHRSQMHRCFLQHHHFQQANLLGLHRYH 268
S ++ +H SSS + HH S + HHH ++++ +H +H
Sbjct: 121 SIIIIIHHHHPSSSS--IIIIHHHHPSSSSIIIIHHHHHPSSSIIIIHHHH 169
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 7/63 (11%)
Frame = -2
Query: 435 SSREWSFLLFLHQEPQ----ISSSHQSLSFL---WHHRSQMHRCFLQHHHFQQANLLGLH 277
SS ++ +H P I H S S + HH S + HHH ++++ +H
Sbjct: 30 SSSSIIIIIIIHHHPSSSIIIHHHHPSSSIIIIHHHHPSSSSIIIIHHHHPSSSSIIIIH 89
Query: 276 RYH 268
+H
Sbjct: 90 HHH 92
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = -2
Query: 420 SFLLFLHQEPQISSSHQSLSFLWHHRSQMHRCFLQHHHFQQANLLGLHRYH 268
S ++ H P SS + HH S + HHH ++++ +H +H
Sbjct: 58 SIIIIHHHHP---SSSSIIIIHHHHPSSSSIIIIHHHHPSSSSIIIIHHHH 105
>SB_17045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1146
Score = 29.9 bits (64), Expect = 3.1
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +3
Query: 213 VKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETG 374
+KK +E+ +S+G ++ E+ E + + AEE +S+N E++E G
Sbjct: 203 MKKRKRVMIES-DSDGSDDFKPESEESDDSVSSGAEEEEPSSDNNSEDEEEEVG 255
>SB_5252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 541
Score = 29.9 bits (64), Expect = 3.1
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = +3
Query: 144 DAAVDKK--EVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDA 317
D A KK E A + T P + K P ++ ++ K+ D+A P E
Sbjct: 368 DDATSKKPNEQARMDATKQAPTDDATSKKPNEQARMDDAT-KQALMDDATSKKPNEQACM 426
Query: 318 EESNDASENGDATEKK 365
+E+ + DAT KK
Sbjct: 427 DEATKKAPIDDATSKK 442
Score = 28.3 bits (60), Expect = 9.4
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Frame = +3
Query: 132 ATMADAAVDK--KEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE 305
A M DA K ++ +E T P + K P + +A K+ D+A P E
Sbjct: 410 ALMDDATSKKPNEQACMDEATKKAPIDDATSKKPNE--QARMDATKQAPIDDATSKKPNE 467
Query: 306 NGDAEESNDASENGDATEKK 365
+++ + DAT KK
Sbjct: 468 QACMDDATKQAPIDDATSKK 487
>SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13)
Length = 1072
Score = 29.5 bits (63), Expect = 4.1
Identities = 20/76 (26%), Positives = 28/76 (36%), Gaps = 1/76 (1%)
Frame = +3
Query: 156 DKKEVAPEEVTSTEPKESP-VKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESND 332
DK A EE S P +SP + E E++ + +E PA+ E +
Sbjct: 447 DKSSSATEEYKSEPSSAQPSANQSPEPEEEKEEASPVPSKDEEETSPMPAKGEGTPEKRE 506
Query: 333 ASENGDATEKKETGVK 380
E EK E K
Sbjct: 507 IEEESPEEEKGEAAEK 522
>SB_56987| Best HMM Match : Cornifin (HMM E-Value=1.5)
Length = 752
Score = 29.5 bits (63), Expect = 4.1
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +3
Query: 222 SPAKKVEAAESN-GKENGTDEAPEDSPAENGDAEESNDASENG--DATEKKETGVKRKS 389
SPA K + E+ G +NG +E+ D P D+++S+ S+ G +A + E KR S
Sbjct: 278 SPALKAISEENTPGSKNGKEESEIDEPYVASDSDDSSGLSKPGSNEAPIQDEDIQKRSS 336
>SB_52882| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1413
Score = 29.5 bits (63), Expect = 4.1
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 141 ADAAVDKKEVAPEEVTSTEPKESPVKKSPA-KKVEAAESNGKENGTDEAPED 293
A AVDK+E P+ E K + SPA KVE + + G+ ED
Sbjct: 104 APQAVDKEEEKPQAADKEEEKSQKEESSPATDKVEPKPAPSEAEGSSLGGED 155
>SB_52084| Best HMM Match : Vicilin_N (HMM E-Value=1.7)
Length = 520
Score = 29.5 bits (63), Expect = 4.1
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +3
Query: 222 SPAKKVEAAESN-GKENGTDEAPEDSPAENGDAEESNDASENG--DATEKKETGVKRKS 389
SPA K + E+ G +NG +E+ D P D+++S+ S+ G +A + E KR S
Sbjct: 188 SPALKAISEENTPGSKNGKEESEIDEPYVASDSDDSSGLSKPGSNEAPIQDEDIQKRSS 246
>SB_50497| Best HMM Match : CH (HMM E-Value=0.0084)
Length = 2086
Score = 29.5 bits (63), Expect = 4.1
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +3
Query: 132 ATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENG 311
A D A E P E S E + ++ ++ +SN E+ +E P D P E+
Sbjct: 1327 APEVDIAEPTSEETPVEGESLEAQAVGHVEAAGEETSPVQSNQIESTVEEVPTDVPTESP 1386
Query: 312 DAE 320
AE
Sbjct: 1387 SAE 1389
>SB_47268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 722
Score = 29.5 bits (63), Expect = 4.1
Identities = 24/75 (32%), Positives = 32/75 (42%)
Frame = +3
Query: 162 KEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASE 341
KE P +VT E SP +KS + + K T + +D + DAE+ DA
Sbjct: 461 KEQCPNDVT--EVSVSPAEKSDTEPIT------KPKSTSKMTKD---QTKDAEKQYDAKA 509
Query: 342 NGDATEKKETGVKRK 386
D EKK K K
Sbjct: 510 KNDVVEKKPKAHKAK 524
>SB_45235| Best HMM Match : CBM_20 (HMM E-Value=0.91)
Length = 817
Score = 29.5 bits (63), Expect = 4.1
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Frame = +3
Query: 183 VTSTEPKESPVKKSPAK---KVEAAESN--GKEN-GTDEAPEDSPAENGDAEESNDASEN 344
+T + K++ ++K K K EA +N G + +D PE++P + N+A +
Sbjct: 419 MTRAQKKKAKLEKKKEKEQRKKEATRTNVVGDDTISSDILPENNPEAKAKETKPNNAMPD 478
Query: 345 GDATEKKETGVKRK 386
+ TEK+ G++ K
Sbjct: 479 KEKTEKQHKGLELK 492
>SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092)
Length = 341
Score = 29.5 bits (63), Expect = 4.1
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +3
Query: 153 VDKKEVAPEEVTSTE--PKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEES 326
V K+E EV +E PKE+ + + K+E E+ +++ E + E G+ E+
Sbjct: 119 VQKEEDKDGEVEKSEEKPKEAKAETEESGKIEEVETTTEQDKQPEEVVKNSEEEGNHEDQ 178
Query: 327 NDASENGDATEKKET 371
D E ET
Sbjct: 179 EPLLSFEDTHEDPET 193
>SB_39590| Best HMM Match : PHD (HMM E-Value=2.2e-18)
Length = 1284
Score = 29.5 bits (63), Expect = 4.1
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +3
Query: 201 KESPVKKSPAKKVEAAESNG-KENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGV 377
K+S K + KKV +S G +E+G + + ++S E+ E SN+ S D E K
Sbjct: 519 KDSESKDTMDKKVGIEDSGGDEEDGGESSGQNS--ESSSPESSNEESSENDEDEWKPEPS 576
Query: 378 KRKS 389
++S
Sbjct: 577 NKQS 580
Score = 28.7 bits (61), Expect = 7.1
Identities = 17/67 (25%), Positives = 28/67 (41%)
Frame = +3
Query: 192 TEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKET 371
+E K++ KK + E +G E+ + SP + + ND E K++
Sbjct: 521 SESKDTMDKKVGIEDSGGDEEDGGESSGQNSESSSPESSNEESSENDEDEWKPEPSNKQS 580
Query: 372 GVKRKSV 392
KRK V
Sbjct: 581 KPKRKYV 587
Score = 28.7 bits (61), Expect = 7.1
Identities = 18/74 (24%), Positives = 33/74 (44%)
Frame = +3
Query: 180 EVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATE 359
E T K+ ++ S + + ES+G +N +PE S E+ + +E E +
Sbjct: 522 ESKDTMDKKVGIEDSGGDEEDGGESSG-QNSESSSPESSNEESSENDEDEWKPEPSNKQS 580
Query: 360 KKETGVKRKSVALD 401
K + RKS ++
Sbjct: 581 KPKRKYVRKSAPVE 594
>SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32)
Length = 1074
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = +3
Query: 150 AVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESN 329
AV++K + +PK K+ +A + +G +APE +P + D
Sbjct: 82 AVEEKPSLDTKPAEDKPKIEAAKQEATADNKAEPKKEQASGIKDAPEATPKKGADKATPK 141
Query: 330 DASENGD 350
+ +GD
Sbjct: 142 EVEASGD 148
>SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84)
Length = 944
Score = 29.5 bits (63), Expect = 4.1
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +3
Query: 132 ATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENG 311
A D A E P E S E + ++ ++ +SN E+ +E P D P E+
Sbjct: 222 APEVDIAEPTSEETPVEGESLEAQAVGHVEAAGEETSPVQSNQIESTVEEVPTDVPTESP 281
Query: 312 DAE 320
AE
Sbjct: 282 SAE 284
>SB_42467| Best HMM Match : Borrelia_orfA (HMM E-Value=1.7)
Length = 810
Score = 29.5 bits (63), Expect = 4.1
Identities = 18/60 (30%), Positives = 22/60 (36%)
Frame = +3
Query: 195 EPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETG 374
+PK K K S GKEN +A ED EE N S + +TG
Sbjct: 748 QPKRQDHKPKTPKASPEKRSCGKENTAKKAKEDRGTPEKQVEELNGCSVKTQVSPGHDTG 807
>SB_35171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 255 NGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETG 374
N ++G D ED + GD ++ +D E+GD + +E G
Sbjct: 23 NEDDDGDDNDKEDGDGD-GDDDDDDDDDEDGDGDDDEEDG 61
>SB_12446| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 615
Score = 29.5 bits (63), Expect = 4.1
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = +3
Query: 201 KESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKET 371
KE KK K E AE K+ G D +SPAE+G + + E G + E K T
Sbjct: 545 KEEGEKKEEEVKEEGAE---KKEGDDAENAESPAEDG--AKPAEEGEGGKSEEAKPT 596
>SB_5549| Best HMM Match : PT (HMM E-Value=1.9)
Length = 282
Score = 29.5 bits (63), Expect = 4.1
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = +3
Query: 144 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEE 323
D D E PE +P++ P +K P KK E + E+ + PED + + ++
Sbjct: 186 DMPEDMPEDKPEYRPEYKPEDKP-EKKPEKKPEDKSEDKPEDKHKDKPEDKLEDKPEDKK 244
Query: 324 SNDASENGDATEKKE 368
+N + EK E
Sbjct: 245 EEKPEDNPE--EKPE 257
>SB_4831| Best HMM Match : E-MAP-115 (HMM E-Value=1.8)
Length = 1151
Score = 29.5 bits (63), Expect = 4.1
Identities = 17/72 (23%), Positives = 30/72 (41%)
Frame = +3
Query: 165 EVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASEN 344
E+ E+ T P+ KKS KK A ++ D SP + + E N + N
Sbjct: 309 EIGTEDENGTHPRSLRDKKSVCKKAVATKTLPNRADNDIVSITSPGKTTEREAENQITLN 368
Query: 345 GDATEKKETGVK 380
+ +++ V+
Sbjct: 369 RPSLRDRKSKVR 380
>SB_52819| Best HMM Match : E-MAP-115 (HMM E-Value=0.82)
Length = 883
Score = 29.1 bits (62), Expect = 5.4
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 162 KEVAPEEVTSTEPK-ESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDAS 338
+E +E T + K E+P++ P ++ E + +P DS E AE +D+
Sbjct: 466 QEGEEDEKTKHDAKTETPMEDVPVERETPGTVTSSEEQSTRSPSDSRFEEEGAEAKSDSK 525
Query: 339 EN 344
+N
Sbjct: 526 DN 527
>SB_51002| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1888
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/61 (19%), Positives = 21/61 (34%)
Frame = +3
Query: 189 STEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKE 368
+T ++ +A N D ++ + D ND + N DAT +
Sbjct: 293 TTSDNDTTTNNDTTSDNDATSDNDTTTNNDTTSDNDATSDNDTTSDNDTTTNNDATSDND 352
Query: 369 T 371
T
Sbjct: 353 T 353
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/52 (23%), Positives = 20/52 (38%)
Frame = +3
Query: 240 EAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKSVA 395
+ N + D ++ N DA ND + + D T ET +S +
Sbjct: 322 DTTSDNDATSDNDTTSDNDTTTNNDATSDNDTTTDNDTTTDNETNTDNESAS 373
>SB_47823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 671
Score = 29.1 bits (62), Expect = 5.4
Identities = 18/77 (23%), Positives = 34/77 (44%)
Frame = +3
Query: 138 MADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDA 317
+A + + KE A EE TE +E+P +K K+ + K T+E ++
Sbjct: 446 VAKSEDEVKEEATEE-KRTESEEAPKRKKSLKRRLSFSRKNKAKKTEEKQDEEGEAREGT 504
Query: 318 EESNDASENGDATEKKE 368
+ N+ S+ + + E
Sbjct: 505 MDDNEVSQKPELVNQSE 521
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 29.1 bits (62), Expect = 5.4
Identities = 18/71 (25%), Positives = 33/71 (46%)
Frame = +3
Query: 183 VTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEK 362
+ S ++S VKKS +K + + ++ + PED PAE + S +N ++
Sbjct: 64 IPSDHKRKSFVKKSASKSKKKRKKRKQQGDEESEPEDIPAE---SRPSIFTEQNPHGKKQ 120
Query: 363 KETGVKRKSVA 395
KE + +A
Sbjct: 121 KENKLSANKLA 131
>SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11)
Length = 3037
Score = 29.1 bits (62), Expect = 5.4
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +3
Query: 177 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDAT 356
E ++ KE S K+ + NG E+G D A D ++ D + A+E+ D
Sbjct: 1291 ESISLISDKEDN-DNSQVKQRGDFDKNGGESGEDTAAADDDNKDSDVDSVGTANEDIDEV 1349
Query: 357 EKKETG 374
+K +G
Sbjct: 1350 MQKGSG 1355
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 29.1 bits (62), Expect = 5.4
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Frame = +3
Query: 219 KSPAKKVEAAESNGKENGTDEAPEDSPA----ENGDAEES--NDASENGDATEKKETGVK 380
K+ AKK + S + +EAP+ A +NG ++++ ++S D+ +ET
Sbjct: 111 KNSAKKAAESSSESESESEEEAPKKKEAPVAKQNGKSKKAKKEESSSESDSDSDEETPTP 170
Query: 381 RKSV 392
+K+V
Sbjct: 171 KKTV 174
>SB_37780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 29.1 bits (62), Expect = 5.4
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 156 DKKEVAPEEVTSTEPKESPVK--KSPAKKVEAAESNGKEN 269
D + AP VTS+ P + P+K K+ + +AA SN + N
Sbjct: 116 DVTQSAPTRVTSSLPSKQPIKSSKTSRSQTKAAPSNARLN 155
>SB_30912| Best HMM Match : SEA (HMM E-Value=1.1)
Length = 354
Score = 29.1 bits (62), Expect = 5.4
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +3
Query: 156 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENG--DAEESN 329
+K VA E++ T K +K P E +GK N D + E D E+ +
Sbjct: 193 EKDSVATEKIPWTRRKIPWPRKKPRGHGERFRGHGK-NSVDTEKDSVATEKNPVDTEKDS 251
Query: 330 DASE-NGDATEKKETGVKRKSVALD 401
A+E N TEK ++ SVA +
Sbjct: 252 VATEKNPVDTEKDSVDTEKDSVATE 276
>SB_24498| Best HMM Match : Galactosyl_T_2 (HMM E-Value=0)
Length = 446
Score = 29.1 bits (62), Expect = 5.4
Identities = 23/76 (30%), Positives = 26/76 (34%)
Frame = +3
Query: 132 ATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENG 311
A+ DA K + STEP E K K E S E G E P D +
Sbjct: 100 ASKTDAEDGKNSTIKNVLKSTEPSEEKNIKQSKKPPEELSS---ETGHSEDPVDKLIKKS 156
Query: 312 DAEESNDASENGDATE 359
EE GD E
Sbjct: 157 LKEEKERDHSEGDEVE 172
>SB_4288| Best HMM Match : DUF1165 (HMM E-Value=2.8)
Length = 162
Score = 29.1 bits (62), Expect = 5.4
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +3
Query: 177 EEVTSTEPKESPVKKSP---AKKVEAAESNGKENGTDEAPE 290
E+V S+ PK+ +K P KK EA E +E DE E
Sbjct: 115 EKVASSSPKKREPRKKPKAGKKKEEAVEEESEEESMDEKNE 155
>SB_2244| Best HMM Match : zf-CCCH (HMM E-Value=0.004)
Length = 445
Score = 29.1 bits (62), Expect = 5.4
Identities = 15/69 (21%), Positives = 35/69 (50%)
Frame = +3
Query: 177 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDAT 356
+E+ S + + ++ + +K ++ E +G NG+D+ P D ++ S ++ D T
Sbjct: 223 DEIMSNQSQTHGIEGAK-EKAKSKEKDGGSNGSDKPPTDGSSDATSTTASTPSTAE-DVT 280
Query: 357 EKKETGVKR 383
E + V++
Sbjct: 281 ESSDPPVRK 289
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 29.1 bits (62), Expect = 5.4
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +3
Query: 276 DEAPEDSP--AENGDAEESNDASENGDATEKKETGV 377
D+ EDS AEN D +E NDA ++ + E+ + V
Sbjct: 30 DKETEDSDPGAENDDEQEKNDADDSDEVKEEDDVSV 65
>SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54)
Length = 240
Score = 29.1 bits (62), Expect = 5.4
Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Frame = +3
Query: 144 DAAVDKKEVAPEEVTSTEPK---ESPVKKSPAKKVEAAESNGKENGTDEAPEDSP--AEN 308
D A +K E PE+ +P+ E ++ P K+E ++N ++ + SP +
Sbjct: 12 DNADEKPEDKPEDKPEDKPEDKSEDRLEDKPEDKLEDKPKENQQNKPEDKQQTSPKTSRK 71
Query: 309 GDAEESNDASENGDATEKKETGVKR 383
+ S S N + T +KR
Sbjct: 72 TSKKTSQKTSLNASRKTSRRTSLKR 96
>SB_26345| Best HMM Match : DUF1531 (HMM E-Value=2.4)
Length = 169
Score = 29.1 bits (62), Expect = 5.4
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = +3
Query: 159 KKEVAPEEVTSTEPKE--SPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESND 332
KKE EE + E S KK +KVE E + +E E P+ ++ E+ +
Sbjct: 90 KKEKEQEETMEEQQTEATSSAKKKKKRKVEDVE-DVEEKVEAETPKKKKKKSETTEDEIE 148
Query: 333 ASENGDATEKKETGVKRKSVALD 401
S N +EKK+ K+K D
Sbjct: 149 ESIN--TSEKKKKKKKKKQTEED 169
>SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30)
Length = 592
Score = 29.1 bits (62), Expect = 5.4
Identities = 15/74 (20%), Positives = 32/74 (43%)
Frame = +3
Query: 165 EVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASEN 344
E P+E +E ++S + K E + G + A ED P + D + S + +
Sbjct: 513 ETKPDETVPSEQEDSSAVEPTEAKDEDDTEEANDAGKETATEDPPKKEEDHQPSGEQPSD 572
Query: 345 GDATEKKETGVKRK 386
++++ + + K
Sbjct: 573 EQPSDEQPSDEQPK 586
>SB_16871| Best HMM Match : DUF1168 (HMM E-Value=9.9)
Length = 100
Score = 29.1 bits (62), Expect = 5.4
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +3
Query: 177 EEVTSTEPKESPVKKSP---AKKVEAAESNGKENGTDEAPE 290
E+V S+ PK+ +K P KK EA E +E DE E
Sbjct: 53 EKVASSSPKKREPRKKPKAGKKKEEAVEEESEEESMDEKNE 93
>SB_48649| Best HMM Match : DUF809 (HMM E-Value=1.3)
Length = 222
Score = 28.7 bits (61), Expect = 7.1
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +3
Query: 156 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPA--ENGDAEESN 329
+++E A EEV E + + K + +G+E ++ E E GD + ++
Sbjct: 117 EEEEEAEEEVVKREVIGNDKRAGEKNKDDGGNKSGEEVKAEQDAETGAGKEEEGDKDNAD 176
Query: 330 DASENGDATEKKE 368
SE+GD E
Sbjct: 177 KDSEDGDKAVDSE 189
>SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37)
Length = 942
Score = 28.7 bits (61), Expect = 7.1
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = +3
Query: 144 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEE 323
D++ ++ E E + ES + +E + T E P DS +++GD +
Sbjct: 566 DSSSEESEDELETSDDSSSSESDTSDDESDDDHKSEKSSIATDTSEHPSDSSSDSGD--D 623
Query: 324 SNDASENGD 350
S+D S + D
Sbjct: 624 SDDESSDSD 632
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 28.7 bits (61), Expect = 7.1
Identities = 21/83 (25%), Positives = 32/83 (38%)
Frame = +3
Query: 153 VDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESND 332
+ +KE EEV K + + P K+ E ++A E+ P E E
Sbjct: 6049 ITRKEKKVEEVKPKTEKPTEREAKPLKEKPLVEEKELTVSAEKAVEEKPLEKPITREEKK 6108
Query: 333 ASENGDATEKKETGVKRKSVALD 401
E KKE +R++ LD
Sbjct: 6109 VEE---VKPKKEKPTEREAKPLD 6128
>SB_26383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1142
Score = 28.7 bits (61), Expect = 7.1
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +3
Query: 144 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEE 323
D ++++ PE EPK+ ++S ++ E E G+ PE P E +
Sbjct: 512 DLPKEEEKQVPEIRVEPEPKDEKEEESKTEEKEKLEGEGQ-----AIPEKEPKEGETMAK 566
Query: 324 SNDASENGDA-TEKKETGVK 380
D D+ EKK +K
Sbjct: 567 EEDKERKDDSKVEKKSRTLK 586
>SB_23300| Best HMM Match : PT (HMM E-Value=1.2)
Length = 85
Score = 28.7 bits (61), Expect = 7.1
Identities = 22/68 (32%), Positives = 30/68 (44%)
Frame = +3
Query: 162 KEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASE 341
KE P E + E E P ++ AK E E E DE E+ A+ GD +E
Sbjct: 6 KEDDPTEEETAEGDE-PTEEETAKADEPTEEETAEG--DEPTEEQTAK-GDEPTEEKTAE 61
Query: 342 NGDATEKK 365
+ TEK+
Sbjct: 62 GNELTEKE 69
>SB_22293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1239
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 255 NGKENGTDEAPEDSPAENGDAEESNDASENG 347
N K+NG + +D+ N D E+SND ENG
Sbjct: 84 NSKDNGKIVSDDDNG--NDDDEDSNDEDENG 112
>SB_14494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 28.7 bits (61), Expect = 7.1
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Frame = +3
Query: 156 DKKEVAPEEVTST------EPKESPVKKSPAKKVEAAESNGKENGTDEAP--EDSPAENG 311
+KK++ +E T E E K +KK + N +EN + +P + +E G
Sbjct: 73 NKKDMETQETLKTNNNKKIEHHELADKNKKSKKKRKRDDNDEENNVESSPCKKVKGSEPG 132
Query: 312 DAEESNDASENGDATEKKETGVKR 383
D E N+ E K + +KR
Sbjct: 133 DTTEDNNQDEKHTEKFKWSSIIKR 156
>SB_7850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 28.7 bits (61), Expect = 7.1
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 231 KKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGD 350
K+ E E N ++N D +D +GD ++ +D +GD
Sbjct: 10 KEEEEDEDNDEDNDIDNDNDDDDDGDGDNDDDDDGDGDGD 49
>SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1080
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +3
Query: 138 MADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAES-NGKENGTDE--APEDSPAE 305
MA+ VDK+ E + + ++ KK AKK E ++ G ++G DE ED P +
Sbjct: 620 MAEKEVDKEGDKESEKSEKDGEKGDEKKDDAKKQEDEDAEEGADDGYDEYYYDEDEPLQ 678
>SB_58461| Best HMM Match : WH2 (HMM E-Value=0.63)
Length = 592
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +3
Query: 165 EVAPE-EVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASE 341
E+ P E+T + ++ SP + E E+N K TD E + E ++E+ DA+
Sbjct: 101 ELKPNLEITKEDMEKINKLVSPVEYPEVFENNEKTAETDGCNEGTTQEGKESEKPRDANS 160
Query: 342 NGDATEKKETGV 377
E + G+
Sbjct: 161 LETNLENESRGL 172
>SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 4303
Score = 28.7 bits (61), Expect = 7.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 351 HHRSQMHRCFLQHHHFQQANLLGLHRYHSLCH 256
HH+ +RC +H H Q + +G R++ LCH
Sbjct: 1292 HHKLWPYRC--EHCHRQFPSKVGFDRHNRLCH 1321
>SB_34529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/64 (21%), Positives = 29/64 (45%)
Frame = +3
Query: 192 TEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKET 371
T+ + + P + + +G+E+G A D+ +E+ A + D K+E+
Sbjct: 93 TDSESERESRRPRARHDTDSESGRESGRRRARHDTDSESERESRRPRARHDTDGESKRES 152
Query: 372 GVKR 383
G +R
Sbjct: 153 GRRR 156
>SB_26913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +3
Query: 174 PEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSP 299
PE+ T + ++ P K+P + AAE +GKEN A +D+P
Sbjct: 79 PEDSTKKKRRKKP--KTPTRASAAAEESGKENEAFVA-DDTP 117
>SB_24336| Best HMM Match : PqiA (HMM E-Value=1.5)
Length = 260
Score = 28.7 bits (61), Expect = 7.1
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -2
Query: 402 HQEPQISSSHQSLSFLWHHRSQMHRCFLQHHHFQQANLLGLHRYH 268
HQ S S S HH+ Q HR QHHH Q + H++H
Sbjct: 73 HQLQYSVYSVSSASLQHHHQRQRHR-HHQHHH--QLQYIQCHQHH 114
>SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89)
Length = 1494
Score = 28.7 bits (61), Expect = 7.1
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -1
Query: 271 PFSLPLLSAASTFLAGDFLTGDSFGSVEVTSSGATSFLSTAASAI 137
P SLP S+ L DFLT S S +TSS + S T++S++
Sbjct: 470 PSSLPSDFLTSSSLPSDFLTSSSSLSDFLTSSSSLSDFLTSSSSL 514
Score = 28.3 bits (60), Expect = 9.4
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -1
Query: 259 PLLSAASTFLAGDFLTGDSFGSVEVTSSGATS-FLSTAAS 143
P+ FL DFLT S S +TSS + S FLS ++S
Sbjct: 304 PISEQQGIFLPSDFLTSSSLPSDFLTSSSSLSDFLSLSSS 343
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 28.7 bits (61), Expect = 7.1
Identities = 18/81 (22%), Positives = 28/81 (34%)
Frame = +3
Query: 159 KKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDAS 338
++ E + SP K P K+ ES + PE G S
Sbjct: 197 RRRTTSETSVDSNENASPFKPPPCKRSARNESGTADKSVGGTPEAEKTAEGSKTRKRKKS 256
Query: 339 ENGDATEKKETGVKRKSVALD 401
+ +E +ETG+ +S D
Sbjct: 257 VRWEGSE-EETGLNAESETRD 276
>SB_59196| Best HMM Match : DUF593 (HMM E-Value=1.7)
Length = 1376
Score = 28.3 bits (60), Expect = 9.4
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 159 KKEVAPEEVTST--EPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSP 299
K + E+ T++ EP + PVK+ P K V KEN ++P+++P
Sbjct: 1150 KMQKTEEKTTASKSEPAQEPVKQPPVKDV-------KENSLPQSPQETP 1191
>SB_43190| Best HMM Match : GKAP (HMM E-Value=1.6e-09)
Length = 816
Score = 28.3 bits (60), Expect = 9.4
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = +3
Query: 180 EVTSTEPKESPVKKSPAKKVEAAESNGKEN---GTDEAPEDSPAENGDAEESNDASENGD 350
E T EPK +P+++S K+ +GK G D A E PA+ A + D
Sbjct: 719 EGTPVEPKGTPLRRSSRKRQLTPYHSGKGKSRLGEDHAEELVPAKQAGAPARYPVNSVSD 778
Query: 351 ATEKKETG 374
+ ++ G
Sbjct: 779 SDDEGARG 786
>SB_24517| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 28.3 bits (60), Expect = 9.4
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +3
Query: 177 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDAT 356
EE +E +KS VE + E D P ++ D ++ +DAS++ D T
Sbjct: 171 EEREHQAARERAKEKSGRGLVELPKRPRLEQAASNLDADDPVDDDDEDDDSDASDDEDDT 230
>SB_12442| Best HMM Match : zf-MYND (HMM E-Value=0.0028)
Length = 3809
Score = 28.3 bits (60), Expect = 9.4
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +3
Query: 174 PEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDA 353
PEE + TE K PVK+ P++++E E + + PE+ P E ++A
Sbjct: 1640 PEE-SETEIK--PVKQ-PSEQIEPEEEPVTQTSEESEPEEEPMTQIPEESMSEAKPVVHI 1695
Query: 354 TEKKETGVK 380
E+ E VK
Sbjct: 1696 PEESEPEVK 1704
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 28.3 bits (60), Expect = 9.4
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Frame = +3
Query: 162 KEVAPEEVTSTEPK-ESPVKKSPAKKVEAAESN----GKENGTDEAPEDSPAENGDAEES 326
K +A EE+ K ++ + S +K + + + K+ A DSP + G E
Sbjct: 2498 KPLAKEELGEISDKCDNQTENSCGRKADDSRKDHGVDSKDTSITTALNDSPTKEGTIESV 2557
Query: 327 NDASENGDATEKK--ETG 374
++ S+ TEKK ETG
Sbjct: 2558 SNQSQANPNTEKKSQETG 2575
>SB_49029| Best HMM Match : Collagen (HMM E-Value=6.7)
Length = 69
Score = 28.3 bits (60), Expect = 9.4
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +3
Query: 249 ESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETG 374
+ G + D +D ++GD E D+ +GD + E G
Sbjct: 11 DDGGSDGYGDNDDDDDGCDDGDCSEDGDSGYDGDNCDGSEVG 52
>SB_47687| Best HMM Match : SCP (HMM E-Value=1.8e-16)
Length = 600
Score = 28.3 bits (60), Expect = 9.4
Identities = 13/62 (20%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +3
Query: 189 STEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESND--ASENGDATEK 362
S + +SP + + +++ E +NG + ++ P+ + E+ D +S+ G+ E
Sbjct: 7 SKDTPKSPEQNNSSQQTEKELANGHNMSKGDETKEKPSHRAEKEQEKDNKSSKEGETKEP 66
Query: 363 KE 368
K+
Sbjct: 67 KK 68
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 28.3 bits (60), Expect = 9.4
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +3
Query: 168 VAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDS-PAENGDAEESNDASEN 344
+APE S E E+P + A E+ T APE + P E A ES +A E
Sbjct: 5152 MAPETTVSPETTEAPGTTVAPETTMAPETTVAPE-TTMAPETTVPQETTIAPESTEAPET 5210
Query: 345 GDATEKKE 368
A E E
Sbjct: 5211 TRAPESTE 5218
>SB_24428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 532
Score = 28.3 bits (60), Expect = 9.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 408 FLHQEPQISSSHQSLSFLWHHRSQMHRCF 322
FL + ISSS + LW +RS+ HR F
Sbjct: 398 FLKESGWISSSRFCVVHLWRNRSERHRFF 426
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,917,144
Number of Sequences: 59808
Number of extensions: 461902
Number of successful extensions: 2686
Number of sequences better than 10.0: 129
Number of HSP's better than 10.0 without gapping: 1740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2509
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2729039029
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -