Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_C05
         (857 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   5.4  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   7.1  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   9.4  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
 Frame = +2

Query: 386 AIFLYLCSGLGITAGAHRLWAHKSYKARLPLRILLTIFNTIAFQDAVVD-WARDHRMHHK 562
           ++F +LC     T    + + H  Y+  L L   + +         ++D  +R+H    +
Sbjct: 142 SVFDFLCRH---TVEYFQNYIHFFYQLLLYLITDMILMRYKELNRVILDNMSRNHLFLVR 198

Query: 563 YSETDADPHNATRGFFFSHIGW 628
            +ET A   N T  F+ S  GW
Sbjct: 199 RTETLAQILNQTVNFYNSAFGW 220


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 185 QEASWVLYETDANDLPEDAP 244
           +E SW+  ET AN+   + P
Sbjct: 109 REISWIFLETVANENTTNCP 128


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -2

Query: 475 WQPSFIGLVCPKSVRASCDTQPRTQVQKYGEY 380
           W  S + L+CP+S+      Q R    K  +Y
Sbjct: 14  WFLSKLFLLCPRSIDEKIKRQERHSFYKIYKY 45


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,648
Number of Sequences: 336
Number of extensions: 4431
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)