Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_C04
(886 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 90 2e-18
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 7e-16
SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37) 81 9e-16
SB_15708| Best HMM Match : UQ_con (HMM E-Value=0) 72 7e-13
SB_33407| Best HMM Match : UQ_con (HMM E-Value=0) 71 2e-12
SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30) 63 3e-10
SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18) 56 5e-08
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15) 51 1e-06
SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05) 41 0.002
SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06) 39 0.005
SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07) 37 0.019
SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39) 36 0.058
SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24) 35 0.10
SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017) 34 0.13
SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.54
SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.71
SB_34490| Best HMM Match : CUB (HMM E-Value=1.3e-07) 31 1.6
SB_56714| Best HMM Match : 7tm_3 (HMM E-Value=1.6e-18) 30 2.9
SB_9360| Best HMM Match : CUB (HMM E-Value=2.5e-35) 30 2.9
SB_33052| Best HMM Match : Ribosomal_S3_C (HMM E-Value=4.2) 29 3.8
SB_8042| Best HMM Match : DUF803 (HMM E-Value=0) 29 6.6
SB_19343| Best HMM Match : tRNA-synt_1e (HMM E-Value=0) 29 6.6
SB_48646| Best HMM Match : Sulfotransfer_1 (HMM E-Value=8.5) 28 8.7
SB_9616| Best HMM Match : PTS_IIB_fruc (HMM E-Value=2.3) 28 8.7
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 90.2 bits (214), Expect = 2e-18
Identities = 47/117 (40%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Frame = +3
Query: 309 PDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGT 488
PD S N W+ AI G GT + GG +K M F DYP SPP +F ++HPN+Y SG
Sbjct: 1149 PDES-NTFEWDVAIFGPPGTLYAGGYFKAHMSFPHDYPYSPPTFRFLTKMWHPNIYESGD 1207
Query: 489 VCLSLLDEEKD-----------WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIY 626
VC+S+L D W P ++ ILL + LLNEPN PA +A ++
Sbjct: 1208 VCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMF 1264
>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 81.8 bits (193), Expect = 7e-16
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 11/108 (10%)
Frame = +3
Query: 324 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 503
+L WE + G GT +E G +K M+F +YP PP F ++HPNV+ +G VC+S+
Sbjct: 361 DLYKWEIMVVGPPGTYYEEGYFKASMVFPKEYPQRPPTLTFISDIWHPNVHKNGEVCISI 420
Query: 504 LDE-----------EKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEA 614
L E ++ WRP T++ I+L + +L EPN + PA +A
Sbjct: 421 LHEPGEDKYGYEKADERWRPIHTVETIMLSVISMLAEPNDESPANVDA 468
>SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)
Length = 190
Score = 81.4 bits (192), Expect = 9e-16
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Frame = +3
Query: 354 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLL--DEEKDWR 527
G +GTP+ G++KL + + YP PPK +F P++HPN+ SG +CL L + W+
Sbjct: 4 GAEGTPYHKGIFKLDIQIPERYPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGMWK 63
Query: 528 PAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEY 647
PA+ I +L I L+ EPN DP AE + N+ ++
Sbjct: 64 PALNISSVLSTILILMAEPNPDDPLMAEISNEFKYNKAQF 103
>SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 145
Score = 71.7 bits (168), Expect = 7e-13
Identities = 30/110 (27%), Positives = 63/110 (57%)
Frame = +3
Query: 324 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 503
N++ W+ I + P+ G +++ + F +YP PPK F+ ++HPN+ G VCL +
Sbjct: 22 NILYWQGLIVPEM-PPYNKGAFRIEICFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPI 80
Query: 504 LDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 653
+ E +W+PA +Q++ + L+++P + P +A+ Y +++ ++ K
Sbjct: 81 ISPE-NWKPATKTEQVIQALLALVHDPEPEHPLRADLAEEYSKDKKKFMK 129
>SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 226
Score = 70.5 bits (165), Expect = 2e-12
Identities = 52/149 (34%), Positives = 67/149 (44%)
Frame = +3
Query: 204 FCRKCQGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGG 383
F K Q A+ R+ E D P A P K D L W I G G+ +EGG
Sbjct: 88 FTAKNQSTAAKRIQRELTEITLDPPPNCSAGP-KGDD----LYEWYSTILGPPGSVYEGG 142
Query: 384 LYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGI 563
++ L + F DYP PPK G VCL +L + W PA+TI ++LL I
Sbjct: 143 VFFLDIHFPSDYPFKPPK---------------GMVCLDILKDS--WSPALTISKVLLSI 185
Query: 564 QDLLNEPNVKDPAQAEAYTIYCQNRLEYD 650
LL + N DP +Y QNR E+D
Sbjct: 186 CSLLTDCNPADPLVGSIAALYVQNRSEHD 214
>SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30)
Length = 204
Score = 62.9 bits (146), Expect = 3e-10
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Frame = +3
Query: 420 PSSPPKCKFEPPLFHPNVYPSGTVCLSLL--DEEKDWRPAITIKQILLGIQDLLNEPNVK 593
P PPK +F P++HPN+ SG +CL L + W+PA+ I +L I L+ EPN
Sbjct: 40 PFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGMWKPALNISSVLSTILILMAEPNPD 99
Query: 594 DPAQAEAYTIYCQNRLEY 647
DP AE + N+ ++
Sbjct: 100 DPLMAEISNEFKYNKAQF 117
>SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18)
Length = 215
Score = 55.6 bits (128), Expect = 5e-08
Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Frame = +3
Query: 324 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLS 500
N+ +E I G + GG +K + +DYP++PP + ++HPN+ G+VCLS
Sbjct: 35 NMEEFELQITPTDGA-YRGGQFKFS-VKTEDYPNTPPVPRCVNNIYHPNMDLDDGSVCLS 92
Query: 501 LLDEEKDWRPAITIKQILLGIQDLLNEPNVKDP 599
LLD DW + ++ ++ G+ L PN++DP
Sbjct: 93 LLD---DWNESNDLEDLVQGLLFLFYNPNLEDP 122
>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 53.2 bits (122), Expect = 3e-07
Identities = 26/70 (37%), Positives = 41/70 (58%)
Frame = +3
Query: 444 FEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTI 623
F +FHPNV +G +C++ L +KDW+P + IKQ+LL ++ LL PN + EA +
Sbjct: 147 FLTKIFHPNVAKNGEICVNTL--KKDWKPDLGIKQVLLTVKCLLIVPNPESALNEEAGKL 204
Query: 624 YCQNRLEYDK 653
+ +Y K
Sbjct: 205 LLERYDDYSK 214
>SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15)
Length = 243
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/92 (30%), Positives = 48/92 (52%)
Frame = +3
Query: 324 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 503
N+ +E I G + GG +K + DYP+ P + ++HPN+ VC+SL
Sbjct: 35 NMEEFELQITPTDGA-YRGGQFKFS-VRTTDYPNVAPSINCKTKIYHPNMDGYDGVCMSL 92
Query: 504 LDEEKDWRPAITIKQILLGIQDLLNEPNVKDP 599
LD DW+ + ++ ++ G+ L PN++DP
Sbjct: 93 LD---DWQASNDLEDLVQGLLFLFYNPNLEDP 121
>SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 47.2 bits (107), Expect = 2e-05
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Frame = +3
Query: 348 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP-----LFHPNVYPSGTVCLSLLDE 512
I G TP+EGG + + DYP PP+ K F+PN+Y +G VCLS++ +
Sbjct: 17 ITGPFDTPYEGGFFYFLIRCPPDYPIRPPRVKLMTTGSGQVRFNPNLYRNGKVCLSIIGD 76
Query: 513 --EKDWRPAITIKQILLGIQDLLNEPNVKDP 599
EK + ++ + LN N++DP
Sbjct: 77 VMEKSFPEFYDYYISVITEKSYLNGQNMQDP 107
>SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 43.6 bits (98), Expect = 2e-04
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Frame = +3
Query: 228 ASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIF 407
A RL E K R + A+P+++ NL W + G T + GG Y R+I
Sbjct: 11 AVKRLMREAKELRNATEL-YHAQPLED-----NLFEWHFTVRGPPDTEFAGGRYHGRIIL 64
Query: 408 KDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL-LDEEKDWRPAITIKQILLGI 563
+YP PP P + +CLS+ + W+P+ +I+ +L+ I
Sbjct: 65 PPEYPMKPPSIMLLTP--NGRFEIGKKICLSMSAHHPETWQPSWSIRTVLMAI 115
>SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)
Length = 200
Score = 40.7 bits (91), Expect = 0.002
Identities = 28/78 (35%), Positives = 35/78 (44%)
Frame = +3
Query: 204 FCRKCQGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGG 383
F K Q A+ R+ E D P A P K D L W I G G+ +EGG
Sbjct: 128 FTAKNQSTAAKRIQRELTEITLDPPPNCSAGP-KGDD----LYEWYSTILGPPGSVYEGG 182
Query: 384 LYKLRMIFKDDYPSSPPK 437
++ L + F DYP PPK
Sbjct: 183 VFFLDIHFPSDYPFKPPK 200
>SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)
Length = 739
Score = 39.1 bits (87), Expect = 0.005
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +3
Query: 348 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPL---FHPNVYPSGTVCLS 500
I G GTP++ GL+ ++ +YP +PP + +PN+Y G VC++
Sbjct: 640 IEGPAGTPYDHGLFAFDILLPANYPDAPPSFHYLSMCNGRLNPNLYEDGKVCIT 693
>SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)
Length = 181
Score = 37.1 bits (82), Expect = 0.019
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +3
Query: 309 PDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPK 437
P G L W I G G+ +EGG++ L + F DYP PPK
Sbjct: 46 PKGD-KLYEWYSTILGPPGSVYEGGVFFLDIHFPTDYPFKPPK 87
>SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)
Length = 841
Score = 35.5 bits (78), Expect = 0.058
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 348 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPK 437
I G TP+EGG Y L ++ + YP +PPK
Sbjct: 693 IRGPPETPFEGGTYNLDIVIPETYPFNPPK 722
>SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24)
Length = 48
Score = 34.7 bits (76), Expect = 0.10
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 522 WRPAITIKQILLGIQDLLNEPNVKDP 599
W PA+ I+ +LL IQ LL+ PN DP
Sbjct: 3 WSPALQIRTVLLSIQALLSAPNPDDP 28
>SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017)
Length = 123
Score = 34.3 bits (75), Expect = 0.13
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 324 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPP 434
NL W + G T + GG Y R+I +YP PP
Sbjct: 2 NLFEWHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPP 38
>SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 710
Score = 32.3 bits (70), Expect = 0.54
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 354 GKKGTPWEGGLYKLRMIFKDDYPSSPP 434
G GTP+EGG++K+R+ + YP P
Sbjct: 56 GPVGTPYEGGVWKVRVDLPEKYPFKSP 82
>SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 897
Score = 31.9 bits (69), Expect = 0.71
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 393 LRMIFKDDYPSSPPKCKFEPPLFHPN-VYPSGTVCLSLLDEEKDWRPAITIKQILL 557
L + F +++P +PP + P V G +C+ LL K W A T++ ++L
Sbjct: 793 LNITFPENFPFAPPFMRVLAPRIEGGFVLDGGAICMELL-TPKGWSSAYTVEAVVL 847
>SB_34490| Best HMM Match : CUB (HMM E-Value=1.3e-07)
Length = 242
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +3
Query: 462 HPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIY 626
+PN YP+ C + + + ITI L + D L+ NVK AE Y
Sbjct: 159 YPNSYPNNMDCRWTIIVQAGFIVRITIAVFELAVNDFLHTSNVKSAQAAEGNKTY 213
>SB_56714| Best HMM Match : 7tm_3 (HMM E-Value=1.6e-18)
Length = 484
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 432 PKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 575
P C P +PNV + TVC+ L E DW ++ + L I +L
Sbjct: 165 PNCTMCPIKQYPNV--NRTVCIDLPLENLDWTSLVSASMLALAITAML 210
>SB_9360| Best HMM Match : CUB (HMM E-Value=2.5e-35)
Length = 275
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +3
Query: 462 HPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIY 626
+PN YP+ C + + + IT+ L + D L+ NVK AE Y
Sbjct: 192 YPNSYPNNMDCRWTIIVQAGFIVRITVAVFELAVNDFLHMSNVKSTQAAEGNKTY 246
>SB_33052| Best HMM Match : Ribosomal_S3_C (HMM E-Value=4.2)
Length = 260
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -2
Query: 741 RQWLSSLTLHCPILIFTQQQPL 676
R+WL S+TL+CP+L T + L
Sbjct: 178 REWLHSITLNCPLLNLTASKNL 199
>SB_8042| Best HMM Match : DUF803 (HMM E-Value=0)
Length = 603
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +1
Query: 358 KRGLHGKVGCI-NYV*SSKMIIHQVLQNA 441
K+ LHGKVGCI + + S+ ++IH + A
Sbjct: 350 KQNLHGKVGCILSIIGSTVLVIHAPQEEA 378
>SB_19343| Best HMM Match : tRNA-synt_1e (HMM E-Value=0)
Length = 583
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 516 KDWRPAITIKQILLGIQDLLNEPNVKDP 599
K + ITIK L ++D+L +P VK P
Sbjct: 377 KSLKNFITIKDFFLAVKDILRKPEVKAP 404
>SB_48646| Best HMM Match : Sulfotransfer_1 (HMM E-Value=8.5)
Length = 674
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 414 DYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAI 536
D + P C F +F +P V LS+ D+E+ WR ++
Sbjct: 60 DATTDAPACFFYKEIFR--AFPYAKVILSVRDDEESWRRSL 98
>SB_9616| Best HMM Match : PTS_IIB_fruc (HMM E-Value=2.3)
Length = 462
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = -1
Query: 586 LGSLRRS*IPNKICFIVIAGRQSFSSSSSDKHTVPDG 476
LGSL + +P++I + AGR++F +S+ K VP G
Sbjct: 69 LGSLAKGLVPSEIRDLANAGRETFEAST--KGLVPSG 103
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,210,624
Number of Sequences: 59808
Number of extensions: 518110
Number of successful extensions: 1118
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1104
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2526446612
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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