Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_C04
(886 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 222 2e-58
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 118 4e-27
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 117 9e-27
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 117 9e-27
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 116 3e-26
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 104 7e-23
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 104 9e-23
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 103 2e-22
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 103 2e-22
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 102 4e-22
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 102 4e-22
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 102 4e-22
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 101 6e-22
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 101 6e-22
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 101 8e-22
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 100 1e-21
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 100 1e-21
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 99 2e-21
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 98 8e-21
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 97 2e-20
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 94 1e-19
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 89 3e-18
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 86 3e-17
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 85 8e-17
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 83 2e-16
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 83 3e-16
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 82 4e-16
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 82 4e-16
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 82 4e-16
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 81 1e-15
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 81 1e-15
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 77 1e-14
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 77 2e-14
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 74 1e-13
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 73 3e-13
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 73 3e-13
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 71 8e-13
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 71 1e-12
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 71 1e-12
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 67 2e-11
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 62 6e-10
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 60 1e-09
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 57 2e-08
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 56 3e-08
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 56 3e-08
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 56 3e-08
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 56 4e-08
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 53 3e-07
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 52 5e-07
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 50 3e-06
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 48 1e-05
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 47 2e-05
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 43 3e-04
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 42 4e-04
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 38 0.007
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 38 0.009
At1g33060.2 68414.m04076 no apical meristem (NAM) family protein... 29 3.1
At1g33060.1 68414.m04075 no apical meristem (NAM) family protein... 29 3.1
At3g05230.1 68416.m00571 signal peptidase subunit family protein... 28 7.2
At2g40470.1 68415.m04994 LOB domain protein 15 / lateral organ b... 28 9.5
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 222 bits (543), Expect = 2e-58
Identities = 94/144 (65%), Positives = 112/144 (77%)
Frame = +3
Query: 222 GIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRM 401
GIA RLAEERK+WRK+HP GFVA+P DG++NLM W C IPGK GT WEGG + L M
Sbjct: 4 GIARGRLAEERKSWRKNHPHGFVAKPETGQDGTVNLMVWHCTIPGKAGTDWEGGFFPLTM 63
Query: 402 IFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNE 581
F +DYPS PPKCKF FHPNVYPSGTVCLS+L+E+ WRPAIT+KQIL+GIQDLL+
Sbjct: 64 HFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDYGWRPAITVKQILVGIQDLLDT 123
Query: 582 PNVKDPAQAEAYTIYCQNRLEYDK 653
PN DPAQ + Y ++CQ+ +EY K
Sbjct: 124 PNPADPAQTDGYHLFCQDPVEYKK 147
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 118 bits (285), Expect = 4e-27
Identities = 55/142 (38%), Positives = 80/142 (56%)
Frame = +3
Query: 228 ASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIF 407
A RL + K +KD P G P N N+M W I G + TPW+GG +KL + F
Sbjct: 5 AKKRLMWDFKRLQKDPPVGISGAPQDN-----NIMHWNALIFGPEDTPWDGGTFKLTLHF 59
Query: 408 KDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPN 587
+DYP+ PP +F +FHPN+Y G++CL +L + W P + +L IQ LL +PN
Sbjct: 60 TEDYPNKPPIVRFVSRMFHPNIYADGSICLDIL--QNQWSPIYDVAAVLTSIQSLLCDPN 117
Query: 588 VKDPAQAEAYTIYCQNRLEYDK 653
PA AEA ++ +N+ EY++
Sbjct: 118 PDSPANAEAARLFSENKREYNR 139
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 117 bits (282), Expect = 9e-27
Identities = 54/142 (38%), Positives = 79/142 (55%)
Frame = +3
Query: 228 ASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIF 407
A RL + K ++D P G P N N+M W I G TPW+GG +KL + F
Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQDN-----NIMLWNAVIFGPDDTPWDGGTFKLSLQF 59
Query: 408 KDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPN 587
+DYP+ PP +F +FHPN+Y G++CL +L + W P + IL IQ LL +PN
Sbjct: 60 SEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL--QNQWSPIYDVAAILTSIQSLLCDPN 117
Query: 588 VKDPAQAEAYTIYCQNRLEYDK 653
PA +EA +Y +++ EY++
Sbjct: 118 PNSPANSEAARMYSESKREYNR 139
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 117 bits (282), Expect = 9e-27
Identities = 54/142 (38%), Positives = 79/142 (55%)
Frame = +3
Query: 228 ASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIF 407
A RL + K ++D P G P N N+M W I G TPW+GG +KL + F
Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQDN-----NIMLWNAVIFGPDDTPWDGGTFKLSLQF 59
Query: 408 KDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPN 587
+DYP+ PP +F +FHPN+Y G++CL +L + W P + IL IQ LL +PN
Sbjct: 60 SEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL--QNQWSPIYDVAAILTSIQSLLCDPN 117
Query: 588 VKDPAQAEAYTIYCQNRLEYDK 653
PA +EA +Y +++ EY++
Sbjct: 118 PNSPANSEAARMYSESKREYNR 139
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 116 bits (278), Expect = 3e-26
Identities = 53/142 (37%), Positives = 79/142 (55%)
Frame = +3
Query: 228 ASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIF 407
A RL + K ++D P G P N N+M W I G TPW+GG +KL + F
Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQDN-----NIMLWNAVIFGPDDTPWDGGTFKLSLQF 59
Query: 408 KDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPN 587
+DYP+ PP +F +FHPN+Y G++CL +L + W P + IL IQ LL +PN
Sbjct: 60 SEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL--QNQWSPIYDVAAILTSIQSLLCDPN 117
Query: 588 VKDPAQAEAYTIYCQNRLEYDK 653
PA +EA ++ +++ EY++
Sbjct: 118 PNSPANSEAARMFSESKREYNR 139
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 104 bits (250), Expect = 7e-23
Identities = 52/142 (36%), Positives = 80/142 (56%)
Frame = +3
Query: 225 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 404
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPSDSPYSGGVFLVTIH 55
Query: 405 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 584
F DYP PPK F +FHPNV +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 585 NVKDPAQAEAYTIYCQNRLEYD 650
N DP E +Y +R +Y+
Sbjct: 114 NPDDPLVPEIAHMYKTDRAKYE 135
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 104 bits (249), Expect = 9e-23
Identities = 43/112 (38%), Positives = 70/112 (62%)
Frame = +3
Query: 318 SLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCL 497
S N+ W I G GTP+EGG++ L + F DYP PPK F+ P++HPN+ G++C+
Sbjct: 33 SNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICM 92
Query: 498 SLLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 653
++L ++ W PA+ ++++LL I LL +PN DP E ++ NR ++D+
Sbjct: 93 NILKDK--WTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQ 142
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 103 bits (247), Expect = 2e-22
Identities = 51/142 (35%), Positives = 80/142 (56%)
Frame = +3
Query: 225 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 404
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPAESPYSGGVFLVTIH 55
Query: 405 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 584
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 585 NVKDPAQAEAYTIYCQNRLEYD 650
N DP E +Y +R +Y+
Sbjct: 114 NPDDPLVPEIAHMYKTDRAKYE 135
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 103 bits (247), Expect = 2e-22
Identities = 51/142 (35%), Positives = 80/142 (56%)
Frame = +3
Query: 225 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 404
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPAESPYSGGVFLVTIH 55
Query: 405 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 584
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 585 NVKDPAQAEAYTIYCQNRLEYD 650
N DP E +Y +R +Y+
Sbjct: 114 NPDDPLVPEIAHMYKTDRAKYE 135
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 102 bits (244), Expect = 4e-22
Identities = 50/142 (35%), Positives = 80/142 (56%)
Frame = +3
Query: 225 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 404
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 31 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPSDSPYSGGVFLVTIH 85
Query: 405 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 584
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 86 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 143
Query: 585 NVKDPAQAEAYTIYCQNRLEYD 650
N DP E +Y ++ +Y+
Sbjct: 144 NPDDPLVPEIAHMYKTDKNKYE 165
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 102 bits (244), Expect = 4e-22
Identities = 50/142 (35%), Positives = 80/142 (56%)
Frame = +3
Query: 225 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 404
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPSDSPYSGGVFLVTIH 55
Query: 405 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 584
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 585 NVKDPAQAEAYTIYCQNRLEYD 650
N DP E +Y ++ +Y+
Sbjct: 114 NPDDPLVPEIAHMYKTDKNKYE 135
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 102 bits (244), Expect = 4e-22
Identities = 50/142 (35%), Positives = 81/142 (57%)
Frame = +3
Query: 225 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 404
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPSNCSAGPVAE-----DMFHWQATIMGPPESPYAGGVFLVSIH 55
Query: 405 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 584
F DYP PPK F+ ++HPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 585 NVKDPAQAEAYTIYCQNRLEYD 650
N DP E +Y +R +Y+
Sbjct: 114 NPDDPLVPEIAHMYKTDRSKYE 135
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 101 bits (242), Expect = 6e-22
Identities = 50/142 (35%), Positives = 80/142 (56%)
Frame = +3
Query: 225 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 404
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPSESPYAGGVFLVTIH 55
Query: 405 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 584
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 585 NVKDPAQAEAYTIYCQNRLEYD 650
N DP E +Y ++ +Y+
Sbjct: 114 NPDDPLVPEIAHMYKTDKNKYE 135
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 101 bits (242), Expect = 6e-22
Identities = 50/142 (35%), Positives = 80/142 (56%)
Frame = +3
Query: 225 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 404
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPSESPYAGGVFLVTIH 55
Query: 405 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 584
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 585 NVKDPAQAEAYTIYCQNRLEYD 650
N DP E +Y ++ +Y+
Sbjct: 114 NPDDPLVPEIAHMYKTDKNKYE 135
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 101 bits (241), Expect = 8e-22
Identities = 51/143 (35%), Positives = 81/143 (56%), Gaps = 1/143 (0%)
Frame = +3
Query: 225 IASARLAEERKAWRKDHPFGFV-ARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRM 401
+AS R+ +E K +KD P + A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCIFAGPVAE-----DMFHWQATIMGPAESPYSGGVFLVTI 55
Query: 402 IFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNE 581
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +
Sbjct: 56 HFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTD 113
Query: 582 PNVKDPAQAEAYTIYCQNRLEYD 650
PN DP E +Y +R +Y+
Sbjct: 114 PNPDDPLVPEIAHMYKTDRAKYE 136
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 100 bits (240), Expect = 1e-21
Identities = 48/142 (33%), Positives = 81/142 (57%)
Frame = +3
Query: 225 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 404
+AS R+ +E + ++D P A P + ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRINKELRDLQRDPPVSCSAGPTGD-----DMFQWQATIMGPADSPFAGGVFLVTIH 55
Query: 405 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 584
F DYP PPK F ++HPN+ +G++CL +L E+ W PA+T+ ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQ--WSPALTVSKVLLSICSLLTDP 113
Query: 585 NVKDPAQAEAYTIYCQNRLEYD 650
N DP E IY +R++Y+
Sbjct: 114 NPDDPLVPEIAHIYKTDRVKYE 135
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 100 bits (240), Expect = 1e-21
Identities = 48/142 (33%), Positives = 81/142 (57%)
Frame = +3
Query: 225 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 404
+AS R+ +E + ++D P A P + ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRINKELRDLQRDPPVSCSAGPTGD-----DMFQWQATIMGPADSPFAGGVFLVTIH 55
Query: 405 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 584
F DYP PPK F ++HPN+ +G++CL +L E+ W PA+T+ ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQ--WSPALTVSKVLLSICSLLTDP 113
Query: 585 NVKDPAQAEAYTIYCQNRLEYD 650
N DP E IY +R++Y+
Sbjct: 114 NPDDPLVPEIAHIYKTDRVKYE 135
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 99 bits (238), Expect = 2e-21
Identities = 49/142 (34%), Positives = 79/142 (55%)
Frame = +3
Query: 225 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 404
+A+ R+ +E K ++D P A P G ++ W+ I G +P+ GG++ + +
Sbjct: 1 MATRRILKELKELQRDPPVSCSA----GPTGE-DMFHWQATIMGPNESPYSGGVFLVNIH 55
Query: 405 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 584
F DYP PPK F +FHPN+ +G +CL +L ++ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILKDQ--WSPALTISKVLLSICSLLTDP 113
Query: 585 NVKDPAQAEAYTIYCQNRLEYD 650
N DP E IY ++ +Y+
Sbjct: 114 NPDDPLVPEIAHIYKTDKTKYE 135
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 97.9 bits (233), Expect = 8e-21
Identities = 47/110 (42%), Positives = 64/110 (58%)
Frame = +3
Query: 324 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 503
N+ W+ I G K T +EG Y+L + F +DYP PPK KFE FHPNV G +CL +
Sbjct: 63 NIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDI 122
Query: 504 LDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 653
L ++ W A ++ ILL IQ LL EPN+ P +A ++ N+ EY K
Sbjct: 123 LQDK--WSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLW-SNQEEYRK 169
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 96.7 bits (230), Expect = 2e-20
Identities = 46/142 (32%), Positives = 77/142 (54%)
Frame = +3
Query: 225 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 404
+AS R++ E + ++ P A P+ D + W+ I G +P+ GG++ + +
Sbjct: 1 MASKRISRELRDMQRHPPANCSAGPVAEED----IFHWQATIMGPHDSPYSGGVFTVSID 56
Query: 405 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 584
F DYP PPK F+ ++HPN+ G++CL +L E+ W PA T ++LL I LL +P
Sbjct: 57 FSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDILKEQ--WSPAPTTSKVLLSICSLLTDP 114
Query: 585 NVKDPAQAEAYTIYCQNRLEYD 650
N DP E +Y ++ +Y+
Sbjct: 115 NPNDPLVPEIAHLYKVDKSKYE 136
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 93.9 bits (223), Expect = 1e-19
Identities = 46/110 (41%), Positives = 63/110 (57%)
Frame = +3
Query: 324 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 503
N+ W+ I G K T +EG Y+L + F +DYP PK KFE FHPNV G +CL +
Sbjct: 64 NIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDI 123
Query: 504 LDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 653
L ++ W A ++ ILL IQ LL EPN+ P +A ++ N+ EY K
Sbjct: 124 LQDK--WSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLW-SNQEEYRK 170
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 89.4 bits (212), Expect = 3e-18
Identities = 43/105 (40%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Frame = +3
Query: 324 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLS 500
NL IPG GTP+EGG +++ + D YP PPK +F ++HPN+ SG +CL
Sbjct: 31 NLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLD 90
Query: 501 LLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQN 635
+L ++ W PA+T+K L+ IQ LL+ P KDP A Y +N
Sbjct: 91 ILKDQ--WSPALTLKTALVSIQALLSAPEPKDPQDAVVAEQYMKN 133
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 86.2 bits (204), Expect = 3e-17
Identities = 44/121 (36%), Positives = 63/121 (52%), Gaps = 11/121 (9%)
Frame = +3
Query: 324 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 503
N+ W I G T +EGG + M F +YP+SPP +F ++HPNVYP G VC+S+
Sbjct: 33 NIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISI 92
Query: 504 LDEEKD-----------WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYD 650
L D W P T++ I+L I +L+ PN + PA EA + + R E+
Sbjct: 93 LHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWREKRDEFK 152
Query: 651 K 653
K
Sbjct: 153 K 153
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 84.6 bits (200), Expect = 8e-17
Identities = 44/121 (36%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Frame = +3
Query: 324 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 503
N+ W +I G T +EGG + M F ++YP SPP F ++HPNVY G VC+S+
Sbjct: 34 NVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCISI 93
Query: 504 LDEEKD-----------WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYD 650
L D W P T++ I+L I +L+ PN + PA EA + NR E+
Sbjct: 94 LHPPGDDPHGYELASERWTPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDNRAEFR 153
Query: 651 K 653
K
Sbjct: 154 K 154
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 83.4 bits (197), Expect = 2e-16
Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Frame = +3
Query: 324 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 503
N+ W I G T +EGG + M F +YP+SPP +F ++HPNVY G VC+S+
Sbjct: 65 NIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISI 124
Query: 504 LDEEKD-----------WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYD 650
L D W P T++ I+L I +L+ PN + PA EA + R E+
Sbjct: 125 LHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDEFK 184
Query: 651 K 653
K
Sbjct: 185 K 185
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 82.6 bits (195), Expect = 3e-16
Identities = 41/115 (35%), Positives = 65/115 (56%)
Frame = +3
Query: 309 PDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGT 488
P G NL W I G GTP+EGG++ L +IF DYP PPK F+ ++H NV +G
Sbjct: 60 PKGD-NLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGD 118
Query: 489 VCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 653
+ +++L + W PA+TI ++L I+ + +P PA +Y +R ++D+
Sbjct: 119 LSVNILRD--SWSPALTITKVLQAIRSIFLKPEPYSPALPVIARLYLTDREKHDE 171
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 82.2 bits (194), Expect = 4e-16
Identities = 40/114 (35%), Positives = 64/114 (56%)
Frame = +3
Query: 225 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 404
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPAESPYSGGVFLVTIH 55
Query: 405 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQ 566
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++ L Q
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVTLIFQ 107
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 82.2 bits (194), Expect = 4e-16
Identities = 35/92 (38%), Positives = 57/92 (61%)
Frame = +3
Query: 324 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 503
N+ + I G +P+EGG++KL + ++YP + PK +F ++HPN+ G +CL +
Sbjct: 33 NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDI 92
Query: 504 LDEEKDWRPAITIKQILLGIQDLLNEPNVKDP 599
L ++ W PA+ I+ +LL IQ LL+ PN DP
Sbjct: 93 LKDK--WSPALQIRTVLLSIQALLSAPNPDDP 122
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 82.2 bits (194), Expect = 4e-16
Identities = 35/92 (38%), Positives = 57/92 (61%)
Frame = +3
Query: 324 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 503
N+ + I G +P+EGG++KL + ++YP + PK +F ++HPN+ G +CL +
Sbjct: 33 NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDI 92
Query: 504 LDEEKDWRPAITIKQILLGIQDLLNEPNVKDP 599
L ++ W PA+ I+ +LL IQ LL+ PN DP
Sbjct: 93 LKDK--WSPALQIRTVLLSIQALLSAPNPDDP 122
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/103 (36%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Frame = +3
Query: 342 CA-IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEK 518
CA I G GTP+E GL+++++ D+P SPPK F +FHPNV +G +C++ L +K
Sbjct: 43 CADIEGPVGTPYENGLFRMKLALSHDFPHSPPKGYFMTKIFHPNVASNGEICVNTL--KK 100
Query: 519 DWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEY 647
DW P++ ++ +L ++ LL EP + +A + +N EY
Sbjct: 101 DWNPSLGLRHVLSVVRCLLIEPFPESALNEQAGKMLLENYDEY 143
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 80.6 bits (190), Expect = 1e-15
Identities = 34/84 (40%), Positives = 54/84 (64%)
Frame = +3
Query: 348 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWR 527
I G +P+EGG++KL + ++YP + PK +F ++HPN+ G +CL +L ++ W
Sbjct: 8 ILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK--WS 65
Query: 528 PAITIKQILLGIQDLLNEPNVKDP 599
PA+ I+ +LL IQ LL+ PN DP
Sbjct: 66 PALQIRTVLLSIQALLSAPNPDDP 89
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 77.4 bits (182), Expect = 1e-14
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 6/146 (4%)
Frame = +3
Query: 231 SARLAEERKAWRKDHPFGFVARPMKNP-DGSLNLMTW---ECAIPGKKGTPWEGGLYKLR 398
S R+ +E K D P G + + +GS + T+ + I G + T + G++ L+
Sbjct: 8 SLRMQKELKLLLSDPPHGASFPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIFNLK 67
Query: 399 MIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD--EEKDWRPAITIKQILLGIQDL 572
+ + YP PP F P++HPN+ SG +CL +L+ + W+P++ I +L ++ L
Sbjct: 68 IQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLL 127
Query: 573 LNEPNVKDPAQAEAYTIYCQNRLEYD 650
L+EPN D E Y NR +D
Sbjct: 128 LSEPNPDDGLMCEVSREYKYNRQTFD 153
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 76.6 bits (180), Expect = 2e-14
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 2/139 (1%)
Frame = +3
Query: 225 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 404
IA RL +E W+ + P GF R N L W + G GT + Y L++
Sbjct: 15 IACNRLQKELSEWQVNPPTGFKHRVTDN------LQKWVIEVTGAPGTLYANETYNLQVE 68
Query: 405 FKDDYPSSPPKCKFEPPL-FHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL-N 578
F YP P+ F PP HP++Y +G +CL +L + W PA+T+ + + I +L +
Sbjct: 69 FPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYD--SWSPAMTVSSVCISILSMLSS 126
Query: 579 EPNVKDPAQAEAYTIYCQN 635
P + P + Y C+N
Sbjct: 127 SPEKQRPTDNDRYVKNCKN 145
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 73.7 bits (173), Expect = 1e-13
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Frame = +3
Query: 225 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 404
IA RL +E W+ + P GF K D NL W + G GT + Y+L++
Sbjct: 15 IACNRLQKELSEWQLNPPTGF---RHKVTD---NLQKWTIDVTGAPGTLYANETYQLQVE 68
Query: 405 FKDDYPSSPPKCKF-EPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL-N 578
F + YP P+ F P HP++Y +G +CL +L + W PA+T+ + + I +L +
Sbjct: 69 FPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYD--SWSPAMTVNSVCISILSMLSS 126
Query: 579 EPNVKDPAQAEAYTIYCQN 635
P + PA + Y C+N
Sbjct: 127 SPAKQRPADNDRYVKNCKN 145
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 72.9 bits (171), Expect = 3e-13
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 2/139 (1%)
Frame = +3
Query: 225 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 404
IA+ RL +E W+ + P GF K D NL W + G GT + Y+L++
Sbjct: 15 IATNRLQKELVEWQMNPPTGF---KHKVTD---NLQRWIIEVIGAPGTLYANDTYQLQVD 68
Query: 405 FKDDYPSSPPKCKF-EPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNE 581
F + YP P+ F P HP++Y +G +CL +L + W PA+T+ I + I +L+
Sbjct: 69 FPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYD--SWSPAMTVSSICISILSMLSS 126
Query: 582 PNVKD-PAQAEAYTIYCQN 635
K P + Y C+N
Sbjct: 127 STEKQRPTDNDRYVKNCKN 145
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 72.5 bits (170), Expect = 3e-13
Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 2/139 (1%)
Frame = +3
Query: 225 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 404
IA+ RL +E W+ + P GF R S NL W + G GT + Y+L++
Sbjct: 15 IATNRLQKEFMEWQTNPPSGFKHRV------SDNLQRWIIEVHGVPGTLYANETYQLQVE 68
Query: 405 FKDDYPSSPPKCKFEPPL-FHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNE 581
F + YP P+ F+ P HP++Y +G +CL +L + W PA+ + I L I +L+
Sbjct: 69 FPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYD--SWSPAMRLSSICLSILSMLSS 126
Query: 582 PNVKD-PAQAEAYTIYCQN 635
+VK P + Y C++
Sbjct: 127 SSVKQKPKDNDHYLKNCKH 145
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 71.3 bits (167), Expect = 8e-13
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Frame = +3
Query: 324 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLS 500
N+ W I G TP+EGG+++L + YP PP+ +F +FHPNV + +G +CL
Sbjct: 33 NIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLD 92
Query: 501 LLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEA 614
+L + W PA T++ + I L+ P P ++
Sbjct: 93 IL--KNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDS 128
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 70.9 bits (166), Expect = 1e-12
Identities = 34/110 (30%), Positives = 55/110 (50%)
Frame = +3
Query: 324 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 503
N+ WE + G G P+E G++ + + YP PPK F+ +FHPN+ G + + +
Sbjct: 58 NIFRWEATVNGPVGCPYEKGVFTVSVHIPPKYPYEPPKITFKTKIFHPNISEIGEIFVDI 117
Query: 504 LDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 653
L W A+TI +LL I +L+ P A +Y ++R Y+K
Sbjct: 118 LGSR--WSSALTINLVLLSICSILSNPVEPLLVSNHAARLYQKDRKAYEK 165
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 70.9 bits (166), Expect = 1e-12
Identities = 36/109 (33%), Positives = 56/109 (51%)
Frame = +3
Query: 309 PDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGT 488
P+G +LM +E I +G + G + + YP PK K + ++HPN+ G
Sbjct: 54 PNGKNDLMNFEVTIKPDEGY-YLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGN 112
Query: 489 VCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQN 635
VCL++L E DW+P + I ++ G+ L EPN +DP EA + N
Sbjct: 113 VCLNILRE--DWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDN 159
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 66.9 bits (156), Expect = 2e-11
Identities = 27/78 (34%), Positives = 48/78 (61%)
Frame = +3
Query: 324 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 503
N+ + I G +P+EGG++KL + ++YP + PK +F ++HPN+ G +CL +
Sbjct: 33 NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDI 92
Query: 504 LDEEKDWRPAITIKQILL 557
L ++ W PA+ I+ +LL
Sbjct: 93 LKDK--WSPALQIRTVLL 108
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 61.7 bits (143), Expect = 6e-10
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Frame = +3
Query: 354 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRP 530
G K + +EGG++K+R+ D YP P F ++HPNV SG+VCL ++++ W P
Sbjct: 38 GPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQ--TWSP 95
Query: 531 AITIKQIL-LGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 653
+ + + LL PN DP EA + ++R Y++
Sbjct: 96 MFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQ 137
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Frame = +3
Query: 354 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDWRP 530
G K + ++GG++K+R+ D YP P F ++HPNV SG+VCL ++++ W P
Sbjct: 38 GPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQ--TWSP 95
Query: 531 AITIKQIL-LGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 653
+ + + LL PN DP EA + ++R Y++
Sbjct: 96 MFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQ 137
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 56.8 bits (131), Expect = 2e-08
Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Frame = +3
Query: 237 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 416
R+ +E + KD P R ++ ++L+ I G +GTP+ GL+ + F D
Sbjct: 336 RIQDEWRILEKDLPEMIFVRAYES---RMDLL--RAVIIGAQGTPYHDGLFFFDIFFPDT 390
Query: 417 YPSSPPKCKFEPP--LFHPNVYPSGTVCLSLL-----DEEKDWRP-AITIKQILLGIQDL 572
YPS+PP + +PN+Y G VCLSLL ++ + W P T+ Q+L+ IQ L
Sbjct: 391 YPSTPPIVHYHSGGLRINPNLYNCGKVCLSLLGTWSGNQREKWIPNTSTMLQVLVSIQGL 450
Query: 573 L--NEPNVKDP 599
+ +P +P
Sbjct: 451 ILNQKPYFNEP 461
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 56.0 bits (129), Expect = 3e-08
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Frame = +3
Query: 237 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 416
RL +E +A K+ VARP N +++ W + G +GTP+ GG Y ++ F +
Sbjct: 9 RLQKEYRALCKEPVSHVVARPSPN-----DILEWHYVLEGSEGTPFAGGFYYGKIKFPPE 63
Query: 417 YPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD-EEKDWRPAITIKQILLGI 563
YP PP P + +CLS+ D + W P ++ IL G+
Sbjct: 64 YPYKPPGITMTTP--NGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGL 111
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 56.0 bits (129), Expect = 3e-08
Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Frame = +3
Query: 348 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGTVCLSLLD---- 509
I G +GTP+ GL+ + F D YPS PPK + +PN+Y G VCLSL+
Sbjct: 641 IIGAEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHSGGLRINPNLYKCGKVCLSLISTWTG 700
Query: 510 -EEKDWRP-AITIKQILLGIQDL-LNE-PNVKDP 599
+ + W P T+ Q+L+ IQ L LNE P +P
Sbjct: 701 KKREKWLPKESTMLQLLVSIQALILNEKPYYNEP 734
Score = 54.4 bits (125), Expect = 1e-07
Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Frame = +3
Query: 348 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGTVCLSLL----- 506
I G +GTP+ GL+ + F D YPS PP + +PN+Y G VCLSLL
Sbjct: 307 IIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLRINPNLYNCGKVCLSLLGTWAG 366
Query: 507 DEEKDWRP-AITIKQILLGIQDL-LNE-PNVKDPAQAEA 614
+ W P T+ Q+L+ IQ L LNE P +P ++
Sbjct: 367 SAREKWLPNESTMLQLLVSIQALILNEKPYFNEPGYVQS 405
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 348 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGTVCLSL 503
I G +GTP+ GL+ + F D YPS PP + +PN+Y G V +S+
Sbjct: 953 IIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVYYHSGGLRINPNLYNCGKVLVSI 1006
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 56.0 bits (129), Expect = 3e-08
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Frame = +3
Query: 237 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 416
RL +E +A K+ VARP N +++ W + G +GTP+ GG Y ++ F +
Sbjct: 9 RLQKEYRALCKEPVSHVVARPSPN-----DILEWHYVLEGSEGTPFAGGFYYGKIKFPPE 63
Query: 417 YPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD-EEKDWRPAITIKQILLGI 563
YP PP P + +CLS+ D + W P ++ IL G+
Sbjct: 64 YPYKPPGITMTTP--NGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGL 111
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 55.6 bits (128), Expect = 4e-08
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Frame = +3
Query: 354 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRP 530
G + ++GG++K+++ + YP P F ++HPNV SG VCL ++++ W P
Sbjct: 38 GPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQ--TWSP 95
Query: 531 AITIKQILLG-IQDLLNEPNVKDPAQAEAYTIYCQNRLEYD 650
+ + + LL PN DP EA ++ ++R Y+
Sbjct: 96 MFDLINVFESFLPQLLLYPNPSDPFNGEAASLLMRDRAAYE 136
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 52.8 bits (121), Expect = 3e-07
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Frame = +3
Query: 237 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 416
RL EE + K G V+ M + D L + +W I G T +EG +++L++ D
Sbjct: 15 RLLEELERGEKGIGDGTVSYGMDDADDIL-MQSWTGTILGPHNTAYEGKIFQLKLFCGKD 73
Query: 417 YPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDWRPAITIKQILLGI-QDLLNEPNV 590
YP SPP +F+ + V P +G V S +WR T++ +L+ + +++++ N
Sbjct: 74 YPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLLIQLKKEMMSSQNR 133
Query: 591 K 593
K
Sbjct: 134 K 134
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 52.0 bits (119), Expect = 5e-07
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Frame = +3
Query: 237 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 416
RL EE + K G V+ M + D + + +W I G T +EG +++L++ +
Sbjct: 15 RLLEELERGEKGIGDGTVSYGMDDAD-DIYMQSWTGTILGPPNTAYEGKIFQLKLFCGKE 73
Query: 417 YPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDWRPAITIKQILLGI-QDLLNEPNV 590
YP SPP +F+ + V P +G V SL +WR T++ IL+ + ++++ N
Sbjct: 74 YPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDILVKLKKEMMTSHNR 133
Query: 591 K 593
K
Sbjct: 134 K 134
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 49.6 bits (113), Expect = 3e-06
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Frame = +3
Query: 348 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGTVCLSLLDE--- 512
I G GTP++ GL+ DYPS PP + +PN+Y G VCLSLL+
Sbjct: 886 IVGAFGTPYQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNLYEEGKVCLSLLNTWTG 945
Query: 513 --EKDWRP-AITIKQILLGIQDLL 575
+ W P + +I Q+L+ +Q L+
Sbjct: 946 RGNEVWDPKSSSILQVLVSLQGLV 969
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 47.6 bits (108), Expect = 1e-05
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Frame = +3
Query: 345 AIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEP--PLFHPNVYPSGTVCLSLLDE-- 512
A+ G GTP+ GL+ ++ YP PP + +PN+Y SG VCLSLL+
Sbjct: 697 ALVGAPGTPYHDGLFFFDIMLPPQYPHEPPMVHYHSGGMRLNPNLYESGRVCLSLLNTWS 756
Query: 513 ---EKDWRP-AITIKQILLGIQDL-LNE 581
+ W + +I Q+LL Q L LNE
Sbjct: 757 GSGTEVWNAGSSSILQLLLSFQALVLNE 784
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Frame = +3
Query: 228 ASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIF 407
A R+ +E K + + F++ P++ N+ W+ AI G T +EGG+Y R+
Sbjct: 12 AVKRILQEVKEMQANPSDDFMSLPLEE-----NIFEWQFAIRGPGDTEFEGGIYHGRIQL 66
Query: 408 KDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD-EEKDWRPAITIKQILLGI 563
DYP PP P + + +CLS+ + + W+P+ +++ L+ +
Sbjct: 67 PADYPFKPPSFMLLTP--NGRFETNTKICLSISNYHPEHWQPSWSVRTALVAL 117
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 42.7 bits (96), Expect = 3e-04
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Frame = +3
Query: 237 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 416
RL EE + K G V+ M + D + + +W I G T EG +Y+L++ D
Sbjct: 16 RLLEELERGEKGIGDGTVSYGMDDGD-DIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKD 74
Query: 417 YPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRPAITIKQIL 554
YP PP +F + V + +G V +W+ T++ IL
Sbjct: 75 YPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDIL 121
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 42.3 bits (95), Expect = 4e-04
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Frame = +3
Query: 237 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 416
RL EE + K G V+ M + D + + +W I G T EG +Y+L++ D
Sbjct: 17 RLLEELERGEKGIGDGTVSYGMDDGD-DIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKD 75
Query: 417 YPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRPAITIKQILLGIQ 566
YP PP +F + V + +G V +W+ T++ IL+ ++
Sbjct: 76 YPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDILVQLK 126
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 38.3 bits (85), Expect = 0.007
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Frame = +3
Query: 237 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKG-TPWEGGLYKLRMIFKD 413
RL EE + K G V+ M + D + + +W I G T EG +Y+L++
Sbjct: 16 RLLEELERGEKGIGDGTVSYGMDDGD-DIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDK 74
Query: 414 DYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRPAITIKQIL 554
DYP PP +F + V + +G V +W+ T++ IL
Sbjct: 75 DYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDIL 122
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 37.9 bits (84), Expect = 0.009
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Frame = +3
Query: 237 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKG-TPWEGGLYKLRMIFKD 413
RL EE + K G V+ M + D + + +W I G T EG +Y+L++
Sbjct: 17 RLLEELERGEKGIGDGTVSYGMDDGD-DIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDK 75
Query: 414 DYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRPAITIKQILLGIQ 566
DYP PP +F + V + +G V +W+ T++ IL+ ++
Sbjct: 76 DYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDILVQLK 127
>At1g33060.2 68414.m04076 no apical meristem (NAM) family protein
similar to NAC1 GB:AAF68626 GI:7716952 from (Medicago
truncatula)
Length = 652
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -2
Query: 390 YTAHLPMESPFYQVSHIPKSLNSMNHLDSS*ASRQNQRD 274
Y + P +S F Q SH+ ++++ N + SR+NQRD
Sbjct: 452 YNVNQPEQSSFEQ-SHVDRNISPSNIFEFKARSRENQRD 489
>At1g33060.1 68414.m04075 no apical meristem (NAM) family protein
similar to NAC1 GB:AAF68626 GI:7716952 from (Medicago
truncatula)
Length = 648
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -2
Query: 390 YTAHLPMESPFYQVSHIPKSLNSMNHLDSS*ASRQNQRD 274
Y + P +S F Q SH+ ++++ N + SR+NQRD
Sbjct: 452 YNVNQPEQSSFEQ-SHVDRNISPSNIFEFKARSRENQRD 489
>At3g05230.1 68416.m00571 signal peptidase subunit family protein
contains Pfam profile: PF04573 signal peptidase subunit
Length = 167
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 261 WRKDHPFGFVARPMKNPDGSLNLMT-WECAIPGKK 362
W F FVA + P SLN ++ W+ IP K+
Sbjct: 75 WNTKQVFVFVAAEYETPKNSLNQVSLWDAIIPAKE 109
>At2g40470.1 68415.m04994 LOB domain protein 15 / lateral organ
boundaries domain protein 15 (LBD15) identical to
SP|Q8L5T5 LOB domain protein 15 {Arabidopsis thaliana};
similar to ASYMMETRIC LEAVES2 [Arabidopsis thaliana]
GI:19918971
Length = 224
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 237 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECA 347
++ E AW H + RPM P G+LN +T CA
Sbjct: 14 KIKREADAW--PHQMAGIRRPMSGPPGTLNTIT-PCA 47
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,918,492
Number of Sequences: 28952
Number of extensions: 373530
Number of successful extensions: 965
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2071520424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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