Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_C03
         (892 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          27   1.0  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     26   1.8  
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    25   3.1  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   5.4  
U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    24   7.1  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = -2

Query: 798  PHQSSREEIPQGPSRTVSRTSCDLSCNQGICRTLPSRNSGGEM 670
            P + + +    GP RT   T  D  C + +CR L + +   E+
Sbjct: 1028 PQRKATKRSDSGPDRTEPDTLLDEQCLEELCRLLDAGSGWREL 1070


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
 Frame = +3

Query: 576 PGLNPARSYAPIGRATWS-PRLAPARSPPWGTTSP 677
           P + P   +   GR  WS P + P R PPW    P
Sbjct: 68  PAIQPVGIFGRPGRPWWSVPGIPPFR-PPWHPRPP 101


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 589 GFNPGNVCRVCPGQPTVIVFGQSF 518
           GF+P  VC++ PG    I   Q F
Sbjct: 374 GFHPSTVCKIPPGCSLKIFNNQEF 397


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 663  GTTSPPRNYEKAVSDRFPGCMRGR 734
            G +SPP+  E  + D FP    G+
Sbjct: 1585 GASSPPKVIELTIGDPFPAIAAGQ 1608


>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -1

Query: 400 NLWSESGQLWRRLRRPSHSSLVGGAA 323
           +LW+    +W+R+ R    +L+G  A
Sbjct: 219 DLWTRCEAMWKRIDRSECRNLIGDMA 244


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 853,783
Number of Sequences: 2352
Number of extensions: 16822
Number of successful extensions: 61
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95920632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)